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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp100279_c0_seq1
Scaffold_idBomo_Chr26
NCBI non-redundant
(nr)		PREDICTED:_THO_complex_subunit_3_[Amyelois_transitella]
Ontology
GO:0000346 C transcription export complex
GO:0000445 C THO complex part of transcription export complex
GO:0000784 C chromosome, telomeric region
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006369 P termination of RNA polymerase II transcription
GO:0006397 P mRNA processing
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0031124 P mRNA 3'-end processing
GO:0046784 P viral mRNA export from host cell nucleus
GO:0051028 P mRNA transport
Transcript
Level		FPKM:4.05 TPM:4.44
ORF EntryO_BomoFB19429_complete:A_BomoFB_comp100279_c0_seq1
Sequence
(Nucleotide)
AAACAACTAAAATTTTAATGTTAAATTTTACATGATAACCAAAGCTATGAAGGATTCAAA
GCATTCGCAAGCTCCTATAGAAGATTTAAGTGAATTACGTAGTTATTTTGCGTCACACAA
TACTACACGCGAGTACATTGCACATTCATCCAAAGTACATTCCGTGGGCTGGTCCTGTGA
TGGTAGAAAGCTGGCTTCTGGGTCATTCGATAAAAGCGTTGCAATATTTAATTTAGAGAG
GAGTAGATTGAGTCAAGATTTTATTTTCAAAGGCCACACAGGCTCTGTAGATCAACTCTG
CTGGCATGCGTCACATCCTGATCTCCTGAGTACAGCGAGCGGAGACAAATCTGTTAGGAT
ATGGGATACACGATCACACAAATGCGCGGCGACAATCCCAACCAAAGGTGAAAACATAAA
TATAGCATGGTCTCCTAATGGCAACACCATTGCGGTAGGGAACAAGGAAGATTTAGTTTC
ATTTATCGATACAAAAACTTATAAAGTGGTAACAGAAGAACAGTTTAACTTTGAAGTGAA
CGAGATATCATGGAATAATACATCGGACTTGTTCTTCCTCACCAACGGACTGGGATGCGT
ACATATTATGACTTATCCATCTCTAGAATTGCAGACAGTACTGAAGGCGCATCCTGGTAC
GTGTATCTGCATCGAGCACGACCCAACCGGTAGATACTTTGCTACTGGGTCAGCCGATGC
TCTGGTCTCACTATGGGATGTCAATGAACTGGCCTGCTTAAGAGTTTTCTCCAGGTTGGA
GTGGCCGGTCCGGACGCTGTCGTTTAGCTTCGACGGCAGGCTGCTGGCGTCCGCGAGCGA
GGACCACATCATCGACATCGGAGACACGGAGACAGGGGAGAAAGTAGCAGAGATCCCGGT
GTCCGCGTCCACGTTCACGGTGTCGTGGCATCCCGCGCGCTACCTGCTGGCCTTCGCCTG
CGAGGACAAGGAGCCGCCCGAGAGGAAACGGGATTTGGGGAATCTCAAACTGTGGGGACT
CTCTAGTTCTTAGTGTTGGAAATGTAATATACAAAATAAACTAAAATACTAAAAAGGATT
GTGTGGTTTTATGA
(1094 bp)

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