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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp100129_c0_seq1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		ATP-binding_cassette_sub-family_B_member_3_[Trichoplusia_ni]
Ontology
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005919 C pleated septate junction
GO:0006810 P transport
GO:0006855 P xenobiotic transmembrane transport
GO:0008152 P metabolic process
GO:0008559 F ABC-type xenobiotic transporter activity
GO:0015562 F efflux transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031427 P response to methotrexate
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042908 P xenobiotic transport
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0055085 P transmembrane transport
GO:0060857 P establishment of glial blood-brain barrier
Transcript
Level		FPKM:2.51 TPM:2.75
ORF EntryO_BomoFB19404_5prime_partial:A_BomoFB_comp100129_c0_seq1
Sequence
(Nucleotide)
AACGAATTGCAATTGCCCGGTCTCTCTTACGTGAACCGGCGGTGCTACTGCTTGACGAGG
CTACTTCAGCCCTTGACCCTCACTCTGAGAGACAAGTACAAGCAGCGCTCGATCGTGCCA
GTGTCGGACGCACTACCATAACCGTGTCACATAGATTGTCGACCATAGTGAACGCCGATA
GAATTATTTGCATGGACCAAGGAGTTATAGTCGAACAAGGAACGCACGAGGATCTCATGA
AAGCCAAAGGGTTTTACCATAAACTGGTGACAACTGGTAACGAGAACAAAGAACCAGCAG
ATATAGAGCCCCTTATTGAGGAAGCTGACGGTGATGGAGACAACATAGAACCAACTGTAC
CTTCAAGATTAGACGTCAGACGACGATCAAGTAAGAAAGTGCTGAGACATCATTCTATTA
AAAAAGATCACCCGGACTGGTTGACACCTCGCGGCTCGATTTCTTCAATGGTATCGATTG
GACTGCAAAATTTCGTATTTAATAGTGATCTCGAATCTGAGGAAGATGAAGACGAAGAAG
AGACTGTAAAAACTGTCAGTGATTGGCAGCTACTGAAATTGAATGCCCCTGAATGGCCAT
TGATAACAGTTGGCTCTATTGCTGCTTTCCTACAAGGAGCATGTTTCCCTGTCTTCGCCT
TACTTTTTGGATTTTCCAGCGGGATCTTCATACTAGATAATCGCGATGATATCATTTATT
TAGCAGATCTTTATTCTGTGTTATTCGTGGTGATAGCCGCGGTTGCTGGTATATCCATGT
GTCTACAAAGTACAACCTTTACAAGCGCTGGCTTGAAAATGACAACTCGACTAAGACATC
AATATTTTGCATCTTTGTTGAAACAGGAAATAGGGTTTTTCGATAAAGAAACGAATACGG
TCGGCGCGATCTGTGCGAGATTGAGCGGTGACACTGCTGAGGTACAGGGTGCCACTGGAC
TCAGGATAGGCCTCATACTGCAGGGTATAAGCTCAGTGGTCGTCGGGTTTTTGTTAGCTA
TCAGCTACAACTGGAAACTTACCTTAGTTGCGACAGTTTTTCTTCCTTTGATGGTAGGTA
GTATATGGTTGGAAGGTATTATATCTCAGAAGGCGCAAATAGATGAACGAAATGCAATGG
AATCAGCCACTGCCATAGCTACTGAAGCCGTTGTCAGCATCAAGACAGTGCAGAGCTTAG
GTGTGGAGACGGTTTTCCTCCAAAAATTTCAAGATGCACTCAAGACTGCCTGTGTAGCTG
TGGCTTATAAAACGCGTTGGAGAGGATTAGTCTACGGTCTTGGAGTTTACATACCGTTCA
TGGCGTACTGTAGCGCTACTGTTTACGGCGCCGTGCTCGTCGCCTATGGAGAAATGGAAT
ATAAACTAGTGTTGCTGGTAAACGAAGCTATAATGTACGGAGCCTACATGTTAGGCCAGT
CGCTGGTGTATGCTCCCAGTTTGAATACGGCAAAGGCGTGTGGAGCAAGGATTCTGTCCA
TCATTCAAAGGCAACCTAAAATTCACAACGCAGTTGGAGTGAAAGACAAAAAAGATTGGG
TGGCGTCCGGAAACTTCAGCATGCGTGATGTAGAATTCTGTTACCCTACAAGGCCAAGTC
AACGTGTTTTGAAAGGAATCGATCTGAAAATGGAAGCTGGTAAAACCATCGCTCTCGTCG
GGTCCTCCGGATGTGGCAAGTCTACAATCCTCCAGCTATTTCAACGTTTCTATGACCCTG
ATTCTGGTTTTATTGAATTAGACAATCGTGACATTAGATCTGCTCTGACTATACCACGGC
TGCGTCGTCAGTTAGGAGTCGTGCAGCAAGAGCCGGTGCTCTTGGACAGAAGTCTGGCCG
AGAATATCGCGTATGGAGATAACAATAGGAAGGTCACTATGCACGAAATCGTCGCCGCTG
CCAAAGCAGCAAACATACACTCATTCATCGTGTCTTTACCCAAGGGTTATGAAACGAATT
TGGGTGCGAACGGTGCTCAGCTGTCAGGAGGTCAAAAACAGCGGGTCTGTATAGCAAGGG
CACTCATTAGGTCGCCACGCTTGTTACTGCTAGATGAAGCTACATCAGCATTGGATGCTA
GCAGTGAACGGGCCGTGACAGAAGCTTTGGAGAAGGCTGCCAAGGGCCGCACTTGCATCA
CTATTGCTCACCGCCTCTCTACAGTTAAAGACGCTGACTTGATCTGCGTTATTGATAAAG
GTAAAATCGTTGAGCGTGGAACTCATGCTGAATTGGTCAGCATGAAGGGACATTACTGGC
GCATGTGTAGAGGCCAAAATATGGCTTAATTATTTTTCCTATAATGCCTTTTATACTCGT
GTTTTCCTGTTTCTGTTTTCCTATTTTGAGATACTCATATTTTAAGATTATAAGATTTTT
TTTGTGCCATGCG
(2413 bp)

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