SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10008_c0_seq6
Scaffold_idBomo_Chr26
NCBI non-redundant
(nr)		MLE_protein_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000785 C chromatin
GO:0000805 C X chromosome
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003725 F double-stranded RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0007549 P dosage compensation
GO:0008026 F helicase activity
GO:0008340 P determination of adult lifespan
GO:0009047 P dosage compensation by hyperactivation of X chromosome
GO:0016456 C X chromosome located dosage compensation complex, transcription activating
GO:0016457 P dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome
GO:0016787 F hydrolase activity
GO:0031453 P positive regulation of heterochromatin assembly
GO:0044822 F RNA binding
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048675 P axon extension
GO:0072487 C MSL complex
Transcript
Level		FPKM:5.62 TPM:6.16
ORF EntryO_BomoFB11353_complete:A_BomoFB_comp10008_c0_seq6
Sequence
(Nucleotide)
GCCCGAGTTAATTCATTTGGTGCGGCTTTAATTGAGTTTAAGTTTCTACCGCTTTCTACA
ACTAATCAACATAATAATTTAGAAAGAATATCGCCCAAAGTATCTGCTCAAAATGGATAT
TAAATCATTTTTATATACTTGGTGTGCTAAGAAAGGCTTAACTCCGCTTTTCGATATCCG
GGCCACAGGTCCTAAACACCGCCAACGCTTTCTGTGCGAAGTCCGCGTCGAAGGATTTTC
ATATTTAGGAGCTGGAAACTCTACTACCAAAAAAGATGCACAGATGAACGCCGCTAAGGA
CTTTGTTAGTTATCTAGTTAGAGCGGGGCAAATCCCACAGGCTGATGTTCCTGAAGATGT
GAAGGCAAAGGCAATTGAGGAATCTACTAATGAAGAATCTGTCGAGAATAATGGTGGTCA
ACAACCTAAGCAAGTCTTTCAGGATGGAATGGGTCCAGAAGTTATAGGACCAGCGTACCA
AGCTTATGGAGGTGAAAATGACAAGAAATTTTCATACATAGATCGCATGCAACAACAGAA
AAATGTTGAAGAAGCTGAAGATCTGGACATAAACTCCAGTCTCCATGGCAACTGGACAAT
GGAGAATGCTAAGTCAAAACTTCATCAGTTTTTACAGATGAATAAAATAAATGCAGACTA
TGTTTACAAAGCAGTTGGACCTGATCATACACGGAGTTTCGCTTGTGAGCTAACAATATA
TGTGAGTCAATTGGGACGCAATGTCACCGGTCGGGAGACCGCCTCAAACAAGCAAACCGC
CAGCAAGTCATGTGCACTGTCGATCGTGAGACAGCTATACCATCTTGGAGTCATTGAGGC
ATACAGCGGTACGCTAAAAAGGGACAGATCCTCAGAGGGTATTATGAAACCATATCCAGT
TGCTATATGCCCGGAACTTGAACAACAATTAGAAGATACCTTACAAGAATTAGAAATCGA
GCCAGTTAATGTCGACGCACCAAGCCAAGATAACCAAGAGGGGAGTGCTGTGACTCTGTT
GCAAAAAGATCGCGCGAAGGCTATGAGAGAAGCGAAGCCTATGCCGGCTGGTGTTGTGAC
GTGGTCTCCTCCGCAGCCGAATTGGAACGCTTGGACAGGGTGTAACATCGACGAGGGCGC
TTTAGCAACTGCCTCCATGGACGAGATTAGCGCTGACCTGGAGAAATGTCACAGGAATAT
TTGTCAGAATAGCAAATTGTACCAGGAAAGCCTCAATGAAAGAGAACATTTGCCGGTGTT
CTCCATGAAATCACAGATAATGGAAGCGATCAACGAGAACCCTGTGATCATCATCCGTGG
TAATACTGGCTGCGGTAAAACTACACAGGTGTGCCAGTTCATCCTCGACGACTACATAGC
GAGCGGTCAGGGCGCGTGGGCCAACGTGTGCGTGACGCAACCGCGCCGAATCTCCGCCGT
CAGTGTCGCCGAGCGCGTCGCGGCTGAGAGGTGCGAAGAGCTCGGGAACACCGTCGGGTA
TTCAGTGCGTTTCGAGTCAGTGCTACCGCGGCCTTATGGGTCAATCATGTTCTGTACCGT
CGGGGTGCTGCTGAGGAAACTGGAAGGCGGTCTGAGGGGTGTCAGCCACGTTTTAGTCGA
CGAGGTACACGAACGCGATGCCGATACGGACTTTGCTCTGATCCTGCTGCGAGACATGGC
CCACACCTACCCCGACCTGCGCATCATTCTGATGTCGGCCACGGTCGACACCACGCTATT
CGTAAAGTACTTCGGAGGCTGTCCAGTCATTGAGGTGCCAGGTCGAACGTATCCAGTGAC
GCAGTACTTCTTGGAAGACTCGATAGAGCTGACCAAGTTCATGCCCCCGCCGATCACTAG
GAAACGGAAATCTACAGGAAAACGAGCGAATAAAGACGACGAAGATGACGACGACGAGGA
TGATTTGGATGAGCCTTACGAAGATTTGAACAAGCAATGCAGCTTGGGAGACGGATACTC
TCAAGCCACAGTGGACGCTTTACAACAGTTGTCCGAGAGAGATTTCAGCTTCGAGTTGGT
CCAAGCGATCCTCATGTACATCGATGGACTGGGAGGCGACGGCGCTGTCCTCGTGTTCCT
CCCCGGGTGGAACCTCATCTTCGCGCTGATGAAGCACCTGTTGCAGCACAGACTCTTTGG
AGATCCATCAAAATACGTTATACTGCCTCTGCACAGTCAAATACCGAGGGAGGATCAAAA
GAAAGTGTTCATTACCCCACCGGAAGGGATCACTAAAGTGATCCTGTCAACCAACATAGC
GGAGACTTCGATAACCATCAACGACGTGGTATACGTCATCGACTCGTGCAAGGCGAAAAT
GAAGCTGTTCACGTCCCACAACAACATGACGTCATACGCCACCGTATGGGCGAGTAAGAC
CAACCTCGAACAGCGCAAGGGGCGTGCGGGGCGCGTGCGGCCCGGCGTGTGCTTCACGCT
GTGCACGTACGCGCGCTACGAGAAACTTGAGGAACATTTGGCCGCCGAAATGTTTAGGAC
TCCGCTACACGAGCTTGCTTTGAGCATAAAGCTCCTCCGCCTGGGTGCGATCGGTCACTT
CCTGTCGAAGGCCCCGGAGCCCCCGCCGCTGGACGCTGTCATCGAGGCGGAGGCTCTGCT
CCGCGAGCTGGGCTGTCTGGACGCCGAGGACGCGCTCACGCCACTCGGGACCATCCTCGC
CAAGCTGCCGATAGAACCTCGCCTCGGCAAAATGATGGTGTTAGGCTTTGTGCTTGGCGT
TGGAGACGCCCTGACCACGATGGCGGCTAATTCTACAACGTTCCCGGAAATATTCGTGCT
CGAAGGCCGGAGGAGACTGTCGATGCACCAGAGAGCCCTGGGCGGAGACCGGGCCTCCGA
CCACGTGGCCATGTTGAATGCATTCCAGATGTGGGAGAGAGAACACAACAAAGGCGAAGA
GGCAGAGCTACGGTGGTGCGAATGGAAGGGCGTACAGCAGACCACGCTGCGTGTTACTTA
CGAGGCTAAACATCAATTGATAAATATCCTCACGACCGCAATAGGCTTCAACGAAGAATG
CTGTGTTCCACAACGTTGGATGCCGAACGGACCGGACCCAACTTTGGACTTGGTCATAGC
CCTCATGTGCATGGGCCTGTACCCTAACGTTTGTCTACACCAAGGGAAGAGGAAGGTATT
AACGACGGAAGGGAAACCGGCATTGATACACAAGACCTCAGTGAACTGCAGCAACATGGA
GCAGAAGTTCCCCTCGCCTCTGTTCGTTTTCGGCGAGAAGGTGCGCACCCGGGCCATCAG
CTGCAAGCAGACCACCATGGTCGCTCCCATACATCTGCTGCTCTTCGGCTGTAACAAAGT
GGAATGGGTGGACAACGTGGTGCGGCTGGACAACTGGCTGAACTTCCAGATGTCGCCGCG
ATCGGCCGCCCTCATCATAGCGCTGCGGCCCGCCATCGAGAGGATCGTGGAGCGCGCGGC
GGCCCAACCCGACGCGGCGCTGCAGTTCTCGCCGGCAGAGCGAAAGGTGGTAGAATGTCT
GCGGGAGCTTTGTGTGACGGACGCCGGTGACTACAACATAAAACGAGACGTCAACATGCC
ATCGTTCCGATCCGAAGGTCCAAAACGATCCATGAGAGGATGGGGAACTAACGGACCTCG
AAGTGGTTTTGGTGGTGGAGGGACCACAGGCAGAGGCTTTACCCAAGGATTAGGAAACCA
AGGTGCTTTCGGGACGCGCTTCGGAAATGGTGGTATCAGCACTCAAAGCAGTCAAGGCGG
TTTTTGGAATCAAGGTGGCAACTTTGGCGGAAGAGGCGATTTTAATAGCGGCCGTGGAAG
TTTTGGTAACCAAGGAAGCTATGGTAACCAAGGAAGCTATGGTAACCAAGGAAGCTATGG
TAACCAAGGAAGCTTCGGTAACCAAGGTAGCTTTGGTAACCAAGGAAGCTTGGGTAACCA
TGGAAGCTTTGGTAGTTCTAGGGGATCCGGGTTCGGTAACAGAAATCAGGGAAACTCTAG
TTGGACACAACGTTATTAATCTATTATTCTGTATAGATTTTATATTCCATTGTACCACGA
AATGATTACCATAACGTTGGGCGGGTTAATATCGTCCCGAACTAGCAATATTACGTAGCT
TATAAGTCTATAAACTTTGGTTTGATTGTTCGACTGTGAAATAAAAACAACATCTATCTT
AAAAACTATAGCCCGATTGAATAATAAGTGAAACACGTTTTTTATTCCTGCAACTAGTAA
TACGCATTTACCTCCG
(4276 bp)

- SilkBase 1999-2023 -