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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70655_c0_seq2
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		chromodomain-helicase-DNA-binding_protein_1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008026 F helicase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
Transcript
Level		FPKM:35.99 TPM:62.77
ORF EntryO_BomoEE23484_complete:A_BomoEE_comp70655_c0_seq2
Sequence
(Nucleotide)
GTCATAAAATCCCTTAAAAAAAAGTACACCGGAAATTACGATTTTCACCATTCGCTTTGA
CGTTTGACATTGGCAACATTGTAATAGTGTTGTTCGAAATAATTTTGATGCGACTAAAGC
AGCAACCTAGTACTATCATAAACACTAAATACTAGTTTTTTCTAAGCTATTCTGTAGTCC
TTCCTAGAATTTTTCCAGCCTATTAATCTAACATCATATTTTACACAAAACATAAAAATT
ATGACGTATAAGCTTTTAACTTTAAGTTACAATGTATTGTTAATTTGAACTGTTAATCAG
TTTCTAGTGGTGAATATCTTAAAATTTAAAAAATATCTTTGTCACCATTGTCAAGCATGT
GATTTTTGTATTGTACCATGGTAAACGAAAATAAGTGTTAAGTAAAAATGAAACGGCAGT
AAACCAGATTGTGTTGCCAAAGAAAACGATTTTCAAAGATCCACAATATTATTTAAGATT
TTTCTATTTGTATTCTAAAGAAAGATTATTCTATTAAATTTTCCACAAAAGCACAGTAAT
TGCAATCATTATCAAACGAAATTTTGGTTAATCGCTTTTATTCCATTTCTGTTGCTTCTT
TGATCTATAAAAGTTCTAATCTAAAACTAAATGTTTTAAGAACTTAACTAAAAAAATACG
TTTTGACGTTACACAGCAATAGGTATTTGATGAGAATACCAAAAATACTAAATAAGGATC
GCATTATGTGCACAACACTAATAAAATTTTGCCAAGTTGCTCGAAGATGGCAATATGGCT
GCAGCGTTCGAGTTTCACTGGCAGTGCGCGGTGCTCGTTTCGTTTCTCGTATAGGATTGG
TGTTCTTGACGGCTCAAAGTTTCATTTTTTATTTTTTGTGGTTATTCTCTTTCTTTACTT
CAATTTGTTAACGAATATTACCAAAATTAAAGTTATTTCATTCTTGTAGTCATCAGAACT
TACTCGTCGACAAAATGGCGTCGCTTCACAAGATTTTGCAGCCAAATGATTTTGTTCAAT
TTTTCACTCTTTCATGAAAATATGATTAAAATTTATTTGTTCAGTATATTAATAAGATTT
TTTTCAATGAAATGTTTTAAGAAAATCGGTTTTGAGCCAATATTATACGAGTAACAGTGA
ATTTCTTAAATAATCACCAAAATGCACCTGAAGGGTTCCATAAATGAATCTGAAAGTGAT
TCCACAAGTGAAAAAGGAGATAAAAGTGACTCCAGCGAATCAGGCTCTGGAAGCGAAAGT
GAAAGTGGCTCTAGTTCCTCAGGTTCAGGATCACACAGATCTGCATCAGAAAAATCTGGT
GTAGGGGGTTCACATCATAGTGATGATAGCAAAACATCACATAACTATGATAATGCGAAT
TCATCAAAATCTGACCATCATACTGATAAAAATAGTTCTGATGAAGACTCAGCACCAAAG
TCTAGATCTAGAAATAGCCATAGCAAAGTAAAATCTGATCTTTGGGAAGAAAATCCAGAT
ATATATGGAATCAGAAGATCAGCACGGCCAAGAAAAGAGCCAGATAGATTAAAATTAGCA
GATAGTGATTCTAGTGAAAGAGATAGAACTCACAGTCGGAAAAGTAGAAAAAAAAGCAAC
TCATGGAATTCTGATACATCAGAAAGTGACAGTGAAATAGGGGGCTCTCCACCACCACCA
TCAAAGAGACCTGGCCAAAGAAGTCTACCTCTGAGGAAAAAGAAACCGAGTAGGAGAAGA
AGGTATTCTAGTGACGAAGAAGAGAGTTCAGAGGGTACAGATGATGAAAGCAAGAGTCGA
ACAACAACAAGACGTACAGGCGCAGCAGTTAGTTATAAAGAAGCAAGTGATGAACAAACT
GATTCTTCTGATCTTTTGGAGGTGGAAGGTGTGGAAGGAGATGGTGAAGCTGAGCCAGAA
CCTGAGGATCATAGTGAGACAATAGAACGAGTTCTGGGAATGCGACGAGGGAAAAAAGGA
GTCACTGGCAATGTGACCACCATTTATTATATAGAAGAACATGGAGACCCTAATGAAGGT
TGTGACCCTAATGATGAAGACTCTACTGAACCTCAATACCTGATAAAGTGGAAAGGATGG
TCACATATTCACAACACATGGGAATCTGAAAAGACAATTAATGATCAAAAAGTTAAAGGC
TTAAAGAAACTGGAAAACTTTATTAAGAAAGAAGTAGAAATCTCATGGTGGAGACAGCAA
GCTGGACCTGAGGATATAGATTACTATGAGTGTCAGTCTGAACTACAGCAAGAATTAGTT
AAAACCTACAATAACGTTGAAAGGATAATAGCTGAACAAAATCGTGAGCTAGAAGGTGGT
GGAACTGCTCATGAATATTTTTGCAAATGGGAATCTCTTCCATATGCTGATGCAACATGG
GAAGATGCAGTTTTAATAGAGAAAAGATGGCCTGTTGAGGTGGAGCACTTTAAAAGTCGA
GAAGCTGCTAAAAGTACTCCATCTAGGCATTGCCCTGTATTGAAAAGGCGACCCAAGTTT
CATCAGATAAAAGAACAACCTGAATACGTGGGAAAAGATTCAAGTTACCACTTGAGAGAT
TATCAAATGGATGGATTGAATTGGTTAATTCACTCATGGTGTAAAGACAATTCAGTAATT
TTAGCAGATGAAATGGGCCTAGGCAAAACGATACAGACAATTTGTTTTTTATACTATCTC
TTCAAGTCGCAACATCTGTATGGACCATTTCTTTGTGTAGTGCCTCTGAGTACAATGACT
GCCTGGCAAAGGGAATTTCAGCAGTGGGCACCCGACATTAATGTTGTTACTTATATTGGT
GATGTTAGTAGCAGAGATATAATTAGGCAGTTTGAGTGGAGCTTTTCTAGCTCAAAAAGA
CTGAAATTTAACGCAATATTAACCACATATGAGATTTTGTTAAAAGACAGACAGTTTTTA
AGGTCTTTTAGTTGGGCTTGCTTGCTTGTAGATGAGGCTCATAGGTTAAAAAACGATGAC
TCTCTACTATATAAGGCCTTAAAAGAATTTGATACCAATCATAGATTATTAGTTACTGGT
ACACCTTTACAAAACTCACTGAAAGAATTGTGGGCCCTTTTACATTTTATAATGCCTTAC
AAGTTTGAGTCTTGGGAAGACTTTGAAAAAGATCATGAAGATGCTGCTACCAAAGGATAC
GAAAAATTACACAAACAGTTAGAACCGTTTATATTAAGGAGGCAGAAAAAAGATGTAGAA
AAATCATTACCTGCCAAAGTGGAACAAATATTAAGGGTGGAAATGACATCTATACAAAAA
CAATACTACAAATGGATATTAACAAAAAACTATAGTGCACTTAGAAAAGGCGTAAAAGGT
TCAATTAACACATTTATCAATATTGTTATTGAACTAAAAAAATGTTGCAACCATGCATTA
TTGACAAAGCCAGAAGATTTCGAGTCTAGAGCTTCTCTTGCTACTTCGGATGCTGTTGAG
AAACTTCTTAGGGGCTCAGGAAAATTACTTTTGCTAGATAAACTGCTGTGCAGGTTAAAG
GAGACTGGTCATAGGGTTTTAATCTTTTCTCAAATGGTCCGAATGTTAGACATTTTAGCA
GAATATTTACAAAGGAGACATTTTCCTTTTCAACGTCTTGATGGAAGCATTAAAGGTGAA
TTGAGAAAACAAGCACTTGATCATTTTAACGCTGAAGGTTCGCAAGACTTCTGTTTTTTG
TTGTCTACTCGTGCTGGTGGGTTAGGTATTAACCTTGCCACTGCAGATACTGTGATAATA
TTTGACTCAGACTGGAATCCTCAAAATGATTTGCAAGCACAAGCACGAGCACATCGTATT
GGTCAAAAAAATCAGGTTAATATTTATAGGTTAGTGACTGCAAGGTCTGTTGAAGAAGAT
ATTGTAGAGAGAGCAAAAAGAAAAATGGTTTTAGACCACCTGGTAATTCAAAGAATGGAT
ACTACTGGAAAAACTGTGCTGAACAAACGGGATGCTTCAGGGACCACAGCCAATAATCCA
TTCAATAAAGAAGATTTAAATGCTATTTTAAAATTTGGTGCTGAAGAGCTTTTTAAAGAT
GATGAAGAAAATGATGAAGACCCAGTTTGTGACATTGATGAAATTTTGCAAAGGGCTGAA
ACCCGGGATGAAGGTCCTGCAATGGTGGGTGATGAGTTACTGTCAGCTTTTAAGGTGGCT
AGTTTTACTTTTGATGAAGAGAAAGCTGTCAATGAACTGAAGAAAGATAATGCTGATGAA
GAACCTAAAGACTGGGATGACATCATCCCTGAAAATGTTCGGAAAACAATAGCAGAAGCA
GAAAAATTAAAAGAAATGGAAGATATTTATTTGCCACCTCGAAGAAAAAATCAACTACAA
AATAATGCTGATGGTGGTAGAAGACGTCGCGGTCGTTCTGGTGATGGTGGCGATGGCGAT
GGTGTTGATGGTGACGGTGAGGCTGAAAGCGATGCATCTGATGGTGAAGCCAGTGCTGAT
GATGATCGACCGAGAAAAAGAGGTCGTCCTCCTGCTTCACATCGGGAGAAAATCAAAGGC
TTCACAGATCAAGAGATAAGACGTTTTGTGAAAAGCTATAAGAAATTTTCCGCGCCACTG
AAGCATCTCGACAGTATAGCGTGTGATGCCGAATTACAAGAAAAACCATTAGCTGAGCTA
AAAAGACTGGGTGAAATACTGCAGGAAAGATGTAAAGCTGTACTTAGTGAGACAGCAGAA
CCAAGTGAACAAAATGAAGGCCGTAAAAACAACAGGAAGACATTTAAACTCGGAGGAGTA
CCTGTAAATGCGAAAACCCTAGCTGCATGTCAAGATGAGTTGGCAGCTTTGGATGACTTT
CTGCCACAAACTAAAGAAGAACGTCTCAAGTGGCAACTAGATTTTAGGACGAGACCAGCG
AATTTTGATGTTGAGTGGAATGTCTCGGACGATTCAAAATTACTAGCAGGAATATACCAA
TATGGTCTGGGATCATGGGAAGCAATAAAAATGGATTCTTCTTTCGAAATAGGAGATAAA
ATATTAACGAATGAGGATAAAAAACCTCAAGCAAAACACCTACAGTCGCGAGCAGAGTAC
TTATTAAAGCTTATTAAAAAGTTACTGGATCAAAAGAATGGAAAACAAAAAATGAAAAAA
CCTCGACCGAAGAGGGCAAATAAAGAACCGGTCACCAAAGATATTGTCGAAGATGACGGT
AGCTCAGCTGAAGATAAAAAAACTAAAGGTGTTAAAAATGATAAAACTGAAAAGGGTAAA
TTAAAAATTGAAGAAGTTTCTACACATGATGAAACTTCTAACGATAAGAAAGAAAAAGAC
AAAAAACGTAAAAAAGACGAAGACCGCAAGGGTGACAAATCTAAAGGACGGAAGAAACCA
CGACAAAGAGGAAATGAAGGAATACCAGGTCCCATGCATTTTACTGCCAACAATGAACCA
AGGGCCTTGGAAGTCTTAGGAGATTTAGATCCATCAGTTTTTGAAGAGTGCAAAGAAAAA
ATGAGACCAGTTAAAAAGGCTCTAAAGGCTCTCGACAATCCAGACCAATCTTTATCGGAA
ACTGAACAAGTGTCAAGAACCAGGGCCTGCCTCACCCAGATAGGTACTCAAATAGATTTG
TGTGTTGAAGCATATCCAGATTCTCAAAAAGTAGAATGGAGAAGTAATCTCTGGTACTTC
GTTTCAAAATTCACTAACTTTGATGCAAAGCAGTTGTACAAGTTGTACAAGTATGGCCTA
AAGAAAAATGAAGCTTCAAAGCAAAAAGATGGGAAGCATAAAGAAAATGTCAAGACAAAT
AATCGTAATAATCATAACTCCATAAACCATTTAAAATCATTCAAGAAAAATTCAAATTCA
AAGCAAAAAAGTGATACAAATGATAAAAAAGAAAAGAAAATGAAGCTAGAAAAGGAGAAA
ACTGATAAGCACGATAAAAACCAGCATACATCAGGGGTCAAGAGAAAACTAGAAGATGGA
GAATGTGACCCAGAACCCAATGATAATAAACGCCACGAAAGAGAACGGAGTCGGTCGGAA
CGAGAGAGGGATCGTGATCGAGAAAGGGACAGGGATCGTGACCGAGAACGCGATCGAGAT
CGCGAAAGGGACCGAGACCGTTCGCGGACACGGCGGGACAGCGGCGGCGCGGGGGGGCCG
CGGGCTCGGCCTTATGTGGCACAGCACGCGCACGTCGAGCACCCCTCGCACCCTGCACAC
CCCGCCTGGACCCCGCCGCCCTATCCCGGGCCCCGACAGTACCGCGGAGACCGCAATCAG
AGACAACACGATAAAAGAAGGTATGGATTCAGTGGCATGGCAGGTCCATACGGTGGCTAT
TATGATAGCACAACAACCATGGCTAGTGGTATGGGTTTTCCGCCTGTGAGGCCTTACGCA
GACGACTGGAGAGGATATTCACAGCCTGAATATGGCTACGATGATCGGGAGTACGAGCGT
GAAGTTTATAGAAGAGATTACGATAGACGCGCACCACCAACATGAGGATAGTGCGTTATT
TGCCGATAATTTGTAAATAATATATGTAAATAGTCCGTAGTTATTTCTTTGGACATCGGT
TTAGCCGTTGCTTAAAGTGTAAGTGACATGTGCTGTGTTTTTTATCTATGTGATAAGCGA
AGCGCTGGTTCAGAACTGATTAATAAATAAATAAATAGTGTTTATGTGAGACTGTACAGT
AAATTTATTTATTGTCGTATCAGTCGATTGTTTTTGTACATATTTTAGACAATTACCAAT
AATTTTAAATTAATTTCTAATGTGTCGCCAATTTTACGGTTTAAGTATTTTGTGTGGTCT
GTTTTTTATTTATTCAATACTGTGTTATCATTATAATTGAGTAATTGATTTGACAGACAG
GTGATATGCATAGTTGATAATAAAATGTACAAAGTTAGTAATTGTTTCTAGGAATGCATG
TAATACAATCATGTGCAATCAATAATGTGTATAGCTTAAACAAAGAGGCACATAATCTTT
TTTCATTGCATTTCTGGCAATGTACAGAAGTGTACGTATTTGTAAACTAATTTCTCATTA
TATTTGCATTTCTGAGTCCTGCTATGGATTCGAACAGTCCTATTTTTATATTATGTAAAG
TTATTCTCGGATAAATAAATGGAATGGAGTGAAAGTGTATTGAATGGTATAAAACCATAA
TTGATAAGCAAATAAAGAAATTAT
(7224 bp)

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