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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70603_c0_seq3
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		probable_chitinase_3_precursor_[Plutella_xylostella]
Ontology
GO:0000272 P polysaccharide catabolic process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 F chitinase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005764 C lysosome
GO:0005975 P carbohydrate metabolic process
GO:0006030 P chitin metabolic process
GO:0006032 P chitin catabolic process
GO:0006955 P immune response
GO:0008061 F chitin binding
GO:0008152 P metabolic process
GO:0008843 F endochitinase activity
GO:0009617 P response to bacterium
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
Transcript
Level		FPKM:0.12 TPM:0.21
ORF EntryO_BomoEE23146_5prime_partial:A_BomoEE_comp70603_c0_seq3
Sequence
(Nucleotide)
CTCATTTGTATCTAAATACAATATTTACAAAATCTTAATTTTTATCTTAACCTAACTACA
ATAATTAAAATAATGTCACACATTTTTAATTTAATTGTTTTTTTTTGTCCAAAAAAAAAC
CTCAACCGACATTGGTCGTTTAAATAGGCAGTGATTTTAGCTGATCTGAGTATTGAGTTA
TTATAAAATGATTAACTAAAAATCTATTCCAGAAAAAAATAGAAGAAAAATTATATTAGT
TTCCCAAAAACACTGAACACGTACTTATACAAAGGAGGTCATTTGGAACTATTGCCTTTA
GCGTCGGAGACCAAACGTGATTCGAATAGTTAAACCCTAATTGCACGAACAATATTCACG
TGATGTTAACGTAATTAAAATACAAATTGACCATGTAAAGGTATATGTGATTCGAATTCT
TGTTATCAAAAGCTATGTGGAAACGAAAACCCATTTTTTGACTTTTGTTTTGGTGCAAAA
AATCGTTTTTGGAAACTCAAAGCACATCTCTGAACGCGTAAATAGTGACAAAGCTATGTT
AACTTGGAAAGCTCTTAAATTTCAGTTTTCTAACAAAAAATAAAATGGTTTTAGTATCAT
CCGTATTTTTGGGAGAAGAAAGTTTTTTTAAAGAAAACTAAAGTACGATAATTTAATATA
AAAATATAAAATAGGAAATTTTATGATCTTATTAATTAGAAAATCAAGAATTTCACACAT
TAAAACGTATTATCACACCTCACTATTTAACCCAATAAATATCGTGTAACTTTATTGTGA
TAGTAGCCGTAAAATAATATAGGCTTAGACAATGAAACGTTGAAATATGGGAGTTGAAAA
TATTATTACTATGCACTAAGTGTGTCATCCAGGTAAACCAATTATTAAAAACGCATACAA
GAACACATACATATTTACATTCTCTCATTTATCGTGCACTTACTGGAACGAATTAAAACT
AAAACTAAAACCGGAATATACGAACAGTTTTGTTTAGATCTAGATGCGAAGGCCGATGTT
GGTCGGTGTGGTCCCGGGGCCTATCGTCTGGCGGGCGGCGCCTGCGTGTGGTGCGCGCAT
CCCTCCACGTTCTCCGGCCAATCGCAGACGTTCTCGTTGGGGTTGAACACGAGGTTGGAG
GGGCACGGCATGTGGTGCTTCCGCTCGCCCTCGCACATGTAGTACATGGTGCAGTCCGCC
TGGTCCTTGTGGTACGAGATGTGGCCGTCCTCCTCCTCGCACGTCACCTCAGTGGGGTCC
TTAGTGGTGTACTGTCCGCTGGTGAGCACCGTCTCGTAGGGCCCGTCGTATTCCAGCTTG
ACCTTGTAGTCGGACAGTTCCTGCTTCATGGTCGTGATGAGCGGGAACTTGCCAGTTCCA
CAGGAGCCGCGGAAGTCGTCCATGTCGACAGACCAGACCATGATCCCGCCGAACCCTTCT
TCCTTCAGCCAGGCCATTTTTGTTTTAAGCGATCTCTCGTCGTCGAACCCGACCCACTGG
TCGCCTCGGTAAGCGAATGGCACCATCTGCTCGTTGTCCCAGACGAGCGTCGTGTTGTCC
TCTCGTAGGAACTCGCAGATTTCGTAGTAGGACATGAAGCCGGCTTCGTTGGTGAAACGT
CCGGCTTCTCCGCCCTCTGAAGCCGGAGCGCCGATGTCGTACTGTGTTTCGTTGATAAGC
GTGAAGGACCTTCCGTACGTGGGCATGCCGATCATCAGCTTCTCTTTGGGGGCGCCCTGG
CGGACCCACTCGCGGGCGGAGTAGTCCACAGTTAGTTTCTTCTGGTAGCTCGTGGCGCTT
TCTAGAGGGAACAGCGGACTGTTGTGGCCGACCTGGCGCTCCCACTGGCCGTGGAAGTCA
TACGTCATCACGTTTATGAAGTCCAAATATTTCGATATTTCCGGTACATCATATCCGGCG
GCGATGGCCAGTGGGAGCGCCAGGTCGG
(1948 bp)

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