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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70600_c0_seq5
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_protein_SON_isoform_X1_[Bombyx_mori]
Ontology
GO:0000226 P microtubule cytoskeleton organization
GO:0000910 P cytokinesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0007049 P cell cycle
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0043066 P negative regulation of apoptotic process
GO:0043484 P regulation of RNA splicing
GO:0044822 F RNA binding
GO:0050733 F RS domain binding
GO:0051726 P regulation of cell cycle
Transcript
Level		FPKM:0.69 TPM:1.21
ORF EntryO_BomoEE23141_complete:A_BomoEE_comp70600_c0_seq5
Sequence
(Nucleotide)
GCGAAGCGAGAGCGGGTCGCTAGTATGTATATAAGACTACAAATTCTTTTTAATTTTGCA
TCTAAAAAGAATATCCTTTTGCTATTTCATAGTTTTGAAATGTCGTTGCAACCATCTGAT
ATTTGAGATAGAGGTCGAAAAACATAATACAAGTGTATTATGAGATCCGACCGGTAGCCG
CGCACAGCATCACGATCGTTGACACTGTCAGCTTTTTAGCCCAAGCCTGCGTACCGCTGG
CCAGTTCCTTTGGGGTTAAGATCTGTGCTCCTGTCGATCCAGTGAACTGACCGAGCGCAC
TGTCCTTTGACCAACCAAAGCCATGAGTACTCAACAATTCGCTTTCTTCTTGTTCCTTAC
GAATCATTGACAATTTCTGTGATACAATCAATGCCATGTCGATGGGAGCGGGCTCTATTC
CTGGCGGATAAGCTTGTGGTCCCGGGGCTGCTAAAGCGGGAACCGATGATAATTGCGTTC
CTGATGTGAAACCCTTCATGTAACTTGGTTGAATTAACGGTTGGGGAGGGGCTGGGAGTG
CCAGAGGTACAGAGCTCGTCTTCGCAACATCCTCAGTGGGCACTGTACTTGGTAGTATCG
CTTTGGTTAACGTGTTTTCAGAAATGGGACTAAGTTTGGCTATTTGCATATCTTTTTTTG
GAGGTGAAACTGGAACCCATTCTAATGCTTTTTCTCTGTGCTGAGTTCCTGAAGATACAG
GGAACTGTAATCTTAGTTCCTCTTTATTGGCTACTGGAACAATGCTGTTTTTTATTGGAA
GGGGCGCTCCTCCCCTAATATTCATGACAATAGGAGCCTTTTCTTTAACAAGAAATGGAT
GATGGAAAGCAAGTGTGTCTTCATTCTCACTCATGTCATCATCGTTTGATGAGACAGAAG
ATAGCTCCCCTAGTGCTTCCTTTTTTGATAAGTGTTTGCAGAAATCTGTTAGTTCATCCA
CTGATTTACCTCCAGATTGTATAGCAGCCATAACTTGGTTTCTGGTATGTGGAGGGAGTG
CAGCCGCCCCAGCAGGCACCGCACCATTTTTGAGCATATTGATAGCATTTCGCCTTGCTA
CTTCAAGAAGTCGTTTTTTTTCACTGTCTGCTAATTTTACCCCAGTTGGTGATCGACTTG
CTCCAGATCGTCTACTTCGTTGTCTCGGAGAATAATGTCTAGACCTGTGTCGAGACCGCG
ATCTTCGTTTTGACCTGGATCTATGCCGCGAACGGCTAGTAGAACGATGTCTATGTCTGC
GTGAAGTAGACCGTGATCTGGATCGTCTAGATTTACTAGGAGATCTTTTAGAACGACTTT
TGTCTTTATGTGATTTTTTATGTGAAATTTCAGATTTTTCTTTTTTCTGACTTTTCTTTT
CTTCTTCACAGATTTTATTATCTTCCACAATTTGCTGTTTTAAAATACCACCAGGATCTG
ATGTTTTCGGAAATTGGGGATTCAGCTCCACTTCTTTGACTGAACTACTTGAGGAGTCAG
TATATTCACCATCCTCATATTTTTCAGCTTTTTTCCTGGCTTGTTCTTCAGCTTTTTTAA
CAGTTTCTTCAAACACAGCACTAAATTTCAGGTTTTTTATTTGAATTTTACCTTTATTTT
TGTCTGATTCAGTATTCGAATCCTGTTTGTTGGTCGGCTCTTGATTTTGGTTCTGATTTA
ATGTGAGATCAGTGCTGACAAGTTTAGAGCCATGAGGAGATTCGGGCATAGGGATTCTGC
TTGCATCCATTGAATTCAGTATATTCGTATCACTTGGGACTTCAGATTTTATGGGTAATG
GTTTCTCATTTTCTACAGATTCAATTTTAATATTTTCATTTGCATATTTTTTCTTTGTAG
TTTTATCTGTTTTCTTCGATTTTAGCCCGTCCGATTCACATTTAATTTTTTTTGGCGGAG
TCAGAGAACGAAGTGAAGGCGATCGACTGTATCTACGTTTTTTCAATTTACTCTTTTTCC
GTTTTTTAGCTTTGTTTGATGAAATTTCACTATTATCAGAGTCATCGCTTTTGGTATTCC
TGTGGGATCGTTTCTTGTCTTTTTTCTTGTGTTTCTTTTTGGTTTTCTTTTTCTTTGAAG
GCACCTCCTCGATTTTAGGAGGGTCAGCATTGAAGGCGCTGAATAGCTCAGAGAGGATTT
CATGCGAAGATTTTTTTGAGTCATCTTTCTTTTTTTCCGGTGTAGTTTTTTCCCTTTTAA
TTAGCAACTCGATTTTGTTAATCAAACTAGTCATTTTTGTCAAAGATTACTTGTTTTGTG
TTGATAATTGTACTGTAAATATTCTCTATATCTATCTCACGAATATAGCGCGATATGCCA
TACTTTTTTACATGACAGCTGACAG
(2365 bp)

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