SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70600_c0_seq1
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_protein_SON_isoform_X1_[Bombyx_mori]
Ontology
GO:0000226 P microtubule cytoskeleton organization
GO:0000910 P cytokinesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0007049 P cell cycle
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0043066 P negative regulation of apoptotic process
GO:0043484 P regulation of RNA splicing
GO:0044822 F RNA binding
GO:0050733 F RS domain binding
GO:0051726 P regulation of cell cycle
Transcript
Level		FPKM:1.69 TPM:2.95
ORF EntryO_BomoEE23132_complete:A_BomoEE_comp70600_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTTTTTTACATAAAATTGTATATATTTACAGCAAAGTACAAAATCGTATCCATA
TTGTTTTATGTGTGAGCACTAGCAGACTATTCCTAATTTCTGCAACGCCAACTGTGCGGC
GTCTGCTTTGGCTTGTTTTTTATTGGCGCTCGCGACGGCTGGCTGGTATTCGACTCCGGC
CACTCTCACCTTAAACAAAAAGTTTTTTTTATGATCAGGACCACATTCGAAACACAAATT
ATATTCTGGCGGTCCGAGTTTCTGTTTCGAACAATACTCTCCCAGCAGCGAGACGGGATG
TTTACCGCCTGCCCCAATTAGTGGCGCTGGACCCCGACTCCTGATTCTGTGTTGTTTGAT
AGCTTTACTGTATTTATTGTTGTATTCTTCTTTGGCTTGCAGACCCTTCGTGTCGAGCTT
GACCTCGAGCAGCAGCGGCTGTAGGGTCCCGGTGCCTTCCTTCCCGAGACCTCGACCCGG
GGTCCAACCCATCTTCTGCAGCAGATGCATACCCATTCCTCCCTCAACAGGAGCTGCACG
TTGTAGTTGATCCTCGCATTAGGTAATACGTTTTGGTTTATCGGCGCAGTACCGTCGTGC
GTCTAACGTACAGCGTCTCCGTATCACAAACAAGCTGCAACAAATATTCACGAATTCCCC
GTTAAAGCCATGCTTCCCTTTGAGTGTTGTTGAGTTATTTACGTTTTTTTTTTAACTCAA
AAGACTGCCAGGCTTTATGAAACGATTTAGAAGACTGACGGAAAACGAAAGATTTTTTTG
AATGACGAAATAAAAATAATGTAGAGATTTTATTCAAATAAGAAAAAAAGACATGATTTT
CTTTCGCAAATAAAGTCTTATTTCAATATTATTGTCAGTCTGATAAATGGGGAAGACTGA
ATATTTGTTCCCGATGTAATGATGATTGACATGCCGAGGAGTTGGCATGATAATTATCAT
CACGGTCATCTCCGTTGAAAAGTAGACAGAGTCTTGTCAAAATATGAAAATAATCAATAA
AATAAAATATTTCATGTATATTTTAGAATACACGGGCCAATTTCACCAATTTATGTCCTG
CAATATCAAGATTTCCTAAATTTTGTTCATATTTAGGACTTTCAAAAATTTCAGACCAAA
TTTAATAGAAATCCCTTTAAAATGGTGGAAAAACAAAGGAATTAATTGGCAACTTAAGCA
TTTTAGAAATATATATATGGCAACCCTTTAAATCTTTATTTAACTGTTATGGTAGCATTC
AATTTAATTTGACAAGTCTCTGTTCGCTTTATTTAAGTTCACGATCACGGTATGTATATG
TTTTCCTTCAGTGTAATGATTGAACGAACATAGTTCTCTCATTACACTATTTTATATTAA
ACGAGATGGTTGCAGTAACATTTTCTTGTAGTTCAATCCTACTATATATTGAGTGAGTGA
TAAAGACTTACGAGTAAGAACAGGAATGTTAATATTATTTGTTAATTAACGAATTAATAC
GGTATAAACGAAAAAATAAAATAAAAATACATATATTATATAAAAACGAATCTGCGTAAT
GTATGGACACGCATGACTTCAGAACGCCGGTAGCAATTTGGGATAATTATTTTTTTGTTG
CATTTCTTATTGTCAGAAGAAAGTTCTTATGAAAGAAAAAATTAGAAAATTGCGAACAAA
ATTAGAAAATTTATGAACAAATAACCACTTTATTAAATTTTCTAATGTAACCTTATGGCG
TTTGACATAACATTCACAGATGTGTGCTGTAAATATCGTTAAAGAGGATTTAAGAAAAAC
TGAAATTCGTTTAAAACAAATACTTATATATAAAAGGAAATTCAGTAAAATAAATAATAA
ATTATAGTCCACGAAGCGAAGCGAGAGCGGGTCGC
(1895 bp)

- SilkBase 1999-2023 -