SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70578_c0_seq6
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_28S_ribosomal_protein_S29,_mitochondrial_[Plutella_xylostella]
Ontology
GO:0003735 F structural constituent of ribosome
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005761 C mitochondrial ribosome
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006915 P apoptotic process
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
Transcript
Level		FPKM:0.96 TPM:1.67
ORF EntryO_BomoEE23059_complete:A_BomoEE_comp70578_c0_seq6
Sequence
(Nucleotide)
TTTTTTTTTTAAGTATTATTATGGCTACAATTTATTTAATCTACATTAAATTACAAAGGA
GCACATTGTAACATAAAGTTATAAGGATTACTAGCACTTGTGAATTTTAGTTCGGTTTCC
AGATCAGAAGGTCCTCTGAGCCACAAACGATCTCTGTAGTAATTCGCACAAGATAAAAAT
TCTTTATCTGTGTATCTTCCTACTTCGATAGGCACAAAGGGGTCTAGATGTTCAAAGCCC
TTTTTGTATAACAAGTATCTGGGTAGGAAACTCTCCTGGTTTTCATCTGGCACAGCCAGT
TGATCTATTGTTAATACTACAACTCCATTGTTTGTTTACTGTTAGAAAGTATTTTGATCT
CTAGGAGGAGTGCATCGATGACGTCACAAGCGTATTTGACTCTGTTTATGCCGTGCTCTA
CGAGTGCCGCTATGGGGGAACCAGCTTCGGTCTTCTCTCGCTTGCTCCATTCATAATCTT
TAGAGATTTTTAACTCACAGTTTTTCAGCAATGCCTGATTCTGAGTCTTGAAATGCAACA
GCCACTCGGCGGCGTCCAGGGGAAGATCGACAAAGCCTTCTTTTGTCTGAGAATTGGTCA
TTTCTTTATGACGAGGAGTTCTTCGTAACCATTCTGACACCCATGGAACATGAAGAATAA
GGTAGCCTTCTTCAAGTGCATAGTGTAGGAGGTGGGCCAATGTCAATGATTTACCTGAAC
CTTTTTCACCATAGAGTACATATCTTATAACTGGCTTGTTCATATCCGAGGCTCTGATGC
AATCCATTATATCCAAAGCAGGCTGTCGCACCATTATGGCTGTTTCAGTGAATGTCTTTG
TCTGCTTCATGAAACTCTTTGGTAAGCCACCATGATTGAACAACTGCTTGCACAAGTCTG
GCTTTATAGTATAGAAGAGGCCTATTTGATTTTCATTGTGTTGAGCAGGATAGATTTCAC
TTGTTCTGAATGTGACTGCCTGAGAATAGCGGCGACAAAGATGCTTCCAGTTACGGGTAA
ACATTATAAACGCACTTATTTAAATAAATATTTAAAATAACAATAACATAACCTAAATAA
CCTAACTTCTTTTTATTTCTTTTTAAATTATTCTAATGGCCTGCATTCTAGTCTTTTGAG
TCGTGTATTATCTATGTGATGTCATAGATATCAGACTTAGTCACTGAAGTATATAGGTCT
ATGGACTTAGTTTGTATTATGTGGAATACAAAACTAGGTATCAACCCAAATACAACTTTT
AAATTTAAAACTTCATGGGATTACCATTATTATAATTACAATTTATTACAGAATACTTCA
AAACACTACCTTGTTTTTTTAAGCCGGAAGTTGTGTTTTAGGCCTGCCGGAGACAGAATT
CAGGAGAAATAGGGTAACCGGGGCCACCACTTCTTCTAAATCTGCCGTCAAAGTAAACGG
CTGACGTAAAGGCGGTGATCTTACCTGGGAATTTCAAGTTTTACATTTAAAGTGTATTTG
ATACCTATCGCCTAAGATGTATTCTACGCGGGTCCGGATCTGTATGTTGTGAATCAATTG
AACGTGAAGTATGGCTAGAACCACTAAAAAAACTTACACAACTCCTTTGTTCTGTTGAAT
AATTTTAACGTTTTAGAACCCAACTTTTACAAATTATTTTGGTACTGAAATGTAGACGTC
TAAAATCATACTAAGAAGGTTACATGGACGCTCCTTGCGTCATATAGGTGCAATTACTGT
TTTGATCTGTGTGCTTAGTGCGAGTTT
(1767 bp)

- SilkBase 1999-2023 -