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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70570_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_nipped-B-like_protein_A_[Bombyx_mori]
Ontology
GO:0000795 C synaptonemal complex
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0008278 C cohesin complex
GO:0010468 P regulation of gene expression
GO:0010628 P positive regulation of gene expression
GO:0032116 C SMC loading complex
GO:0034088 P maintenance of mitotic sister chromatid cohesion
GO:0035327 C euchromatin
GO:0043234 C protein-containing complex
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0070193 P synaptonemal complex organization
GO:0071733 P obsolete transcriptional activation by promoter-enhancer looping
Transcript
Level		FPKM:3.29 TPM:5.74
ORF EntryO_BomoEE23042_complete:A_BomoEE_comp70570_c0_seq1
Sequence
(Nucleotide)
AAAATTTACAGTTTATGGCAACACCAATCTGCAATTTCTTGAGCTAAATGTTGAGATTAT
GTTTAATTTTTTCTGGCTATGTAAAATACAAATAGTTAGCAATGTTTCTGTGAGTATTTC
ATGTATATCAACACGGAATCTTTTACATACAAAGTATCGAAAGTTTTTCGTATCTAATGG
GAGTGTCGTTTAGATGCGCTGACCTTCGTTTTGATGCACAACTCACAACAAAGCATCAAA
TTGACGGCTGCCCCATTTTCACAACAATCTTAGGATTTGTTACTGGTTAATTATTAGTGA
AAATCAATTACTATGATGAGGTTCCAAATGATAAACAGCAACCTGTTATGTGCCAAGTGT
TACGTGAGTGGAAAGTAAAATGATAATGGAATCGGCGACTACGCAAACAATTTTGTACGG
TGTGATTTGTCGTTCAGAACCACAGACTTTCTTTTTAACTTCTAGGAAAGTATTATTAAA
CCTGAGGAAATAAAATTGTTGGATCAAAATGAATGAGAGGGATATTCCCAGTGTCCCCAT
TACAACACTAGCAGGAGTAGCTAGTCTGACAGATTTATTACCAGTGTTACCACTTCCAAC
ACCTTTACCGTCAACATTAAATAACAAGTCGCAACTTTTCCACCCACTGGTGGCTGAAGA
GGCAGCAAAATTATTGGCAACACGAGATAAAGATTTAGTTTCGCAGCTTCTTGAGTCACT
AATGCAAACGTCTGTACGGAATATAGATTTAAAGGATGAAAGCATTCCAAATGCAGTTAG
TCCTGCACCTCAACAACAATCTACACCTGAATTGTTGAAGGCAATTTTAAGCATAAATCC
CAATGTATTTGATCAACAGCAACAAAATCATTGGAGTAACAATAGTATACACACATCAAA
ATTTAATGGGATATCTCCATCTCCATCATATAGTTATACACAACATAATGCAGTTCCCTC
AAGCCCTTCGACATTAGGGACAGCAATTCACTCTGGGACCATTCCCAGTCAACAGTTGTT
GGCTCCACCATGTCAGTCATCACCTCACGTAAACATGGGTTCCCCTCCATCCCAGGCCAG
ACCAGGTTCCCAACTTAATATCACTGGACAAAATAGTATATCCCCGATTTGGAGTAATGC
AAATTCATCCAGTACATATCCGAGTCCGCAGTCCACAACTTGTTCGAATCCTCAAAATGG
TGGATTCTACAATAGTATAGTTTCAGACAATAGAAATTTTGATACTAATATTAGTGATGA
AAAAGATCCATTATCTATGTCACCAACAAATCAACCTGAACAACAAAGGTTACACATGCA
AATGCAAGACAAAACTTTTGAACAAGCTGATGGTAACGTTATGACTGGCCAATCTCCAGC
CCAAGCTAGTGTAGCGCCATCACCCTTACGACAAGAACCTCATGTGCCTCAGCCGTCAAT
GGGTGCACCTTATGCTCCCATACAACAAACACAAAACACTGCTACTGATAAGCAAGACAA
CAAAAACGCCAATGCAAACAACAGATATCCTGTAGTAAAACTTGGCCGTCTATCTGATGG
AATTCTGAAAAAACACGACTTTTCTAATGATTCTCGATCCAGAAAAAATAGTGTTCTTGA
ATCGGATTCAGATGAAAACGCGCCGCTTAAACCAAAATCTAGTAATTGCACTCCCACTGT
AGACAAGGAAAGGGAAGCCATAGATATTGCTAGAGAAAAAAATTGGGAAGCTGTTAAAAG
GAAACATGAAGAAGCTAGTAAAAAAGAAGAAGCTGAGGCAGCTATAGTGCGACCCAAACT
AAGAAAAGTCGAAAGACGATTAGTACCTGTTTTAGAAATGTTGTCAGTAGATGAATTAAT
GGAAACAAACACGTATCAACGATTCAATAAATTAATTGAATCGGTATTTGAAACCATTGA
TGATGATGTAATTATAACAGAAGAAATGGAGGGTACTGATATCCCAGAAGAATTACTGCT
GCCACGGTATCAACTTCAGGAACTGTGTTCGGAGGCAGCAAAATTGAAAAACCTTGGTGC
TATGGAAGCAATACCTTCAGACAGATTAGTTCGCCTATTGAATATATTAGAAAAAAATAT
AAGAGCGTCAGAGAAAATGTCATTGTTGGGCGATCCTGAAGACAGTGAAGAAATGCGGCA
GATATGGATAGAATCAGCTTTAGAAAGAGTGATGTGTGCGTCAGATGCATGTCTCACGTC
TTTGTACATAATGACATCCCCGAGCATGCCGAAACGAATATTTTTAGAAGACGTTATAGA
TAGAATTATTATGTTCATTAAATTCCAATTAAACAATACCATTTACTGTGTATATGATCC
TGTATATAGTATTCAGACGACATCTAAAAGGAAAGTGGACGGCCGCAAGCGTCGCGGCGG
CGGGGCGGGGCTCGCGACGCGTCGCTGCGGCGGCTCCACGCGCGCCGTCAAGGAGCTGTA
CACGCACGCGCACGAGAGCGTCACGCTGCTCGCGGAACTGTTCGCGGCGCACCACCTCAC
CGACACCACGGTGCTGCACGCCTCCACTGTTGGCGTCTCGCCCTTCTTCGTAGAGAACGT
CAGCGAGCTGCAGCTGTCGGCGTTGAAACTCGTCACGACGATATTTACAAAATATGAACA
ACATCGACGTCTCTTACTGGAAGATATATTGGCATCGATAGCCCGTATACCCAGTTCAAA
ACACAATTTGCGTTCCTTTCAACTAAATGCTGATCAACATATTCAAATGCTCACGGCGCT
TGTCTTACAACTTGTACAATGTGTCGTCACTCTGCCAGAGACGCTTTGTAAATCTAATGA
GAAAGACAAGGAACATTCAGAGTCTTCTGATAGTAAAAAACCTGTAGATAAAGACCTGCT
CATCATCTCAAAGTACGAAGCGGCAATAAGCGTAGGTGGCACATTCCTAACGTCATTCCT
AAACAAATGTCGGAGTCGTTCCGAAGAGGTGGACTTCAGGCCGCTGTTTGAAAATTTCGT
ACACGACCTCTTGACGACTGTTAACAAACCCGAGTGGCCCGCGACGGAACTACTGCTCAG
CTTACTCGGAACCATGTTGGTGAAGTACATGTCGGACAAATCTATGGAGATGTCCGTTCG
CGTGGCGTCGCTGGAGTACCTCGGGCTGGTAGCGGCGCGTCTGCGCAGGGACAGCGTGCA
CTCGCGCGGCAAGCTCGCCGCCATGGACGCTGTCGTGAGGGACATCCGCGCCGAGGAAGA
GAAGGACGGCACCCACGGACAGAACGTGACGTCCGGCCTCGACGAGGACGAAGAGAGAAC
GGAATTCCTGCAGCGGGTCCTGCTGGATTATCTCGCGATAAACGGGCAGAAGGATCAAGC
TTGGAATTGCGCTCGACATTTTTATATCACGCAGTGGTACAGGGATATGGTGGTTCAGCC
GAAGAATACATCGCCGACAAAAAAGCCTAAAAATAAATCTAAGAAGCGTCATAGAGAACT
TTCTAGCGAGGAGGAATCCGACGCTGACGAAGACAGTGATGGAGGCCTGAAGGACTCTAA
ATCGGATCGAAAGCATATCGCGAGTGCTATCGATTCGGCAGAAAAATTCAAAACAATAGA
ACGAAGAAAGAATTTCTTTATAGAAAAAATTAGGCCATTCCGGTACCAGGGTGGCACCCA
AGTGCAGGTGATGCAATCGTACATAGATTATAGTGGAGCTGAACTTATTTCGCAATATCT
AGCTTCAAAAAGGTCTTTCTCGCAAAGTTTTGATCGGTATTTGCGAAAAATTCTTGTTAT
ACTGTGCGAAAATACGATCGCCATACGAACGAAGGCGATGAAATGCTTGGCGATGATAGT
CGAAGCAGATCCGTCCGTATTGGCGAGGCCCGATATGCAGATCGGAGTGAACCGATCGTT
CCTCGACCAATCCACGGCAGTGCGGGAAGCTGCCGTCGATCTCGTTGGAAAATTCGTCTT
GAGCAGACACGATCTTATCGACAAGTATTACTCTATGCTCTCAAACAGAATATTGGATAC
TGGCGTATCAGTAAGGAAACGTGTAATTAAAATTTTAAAAGACATCTGTATAGAATGCCC
CGAGTTTCCTAAAATACCCGAGATATGTGTAAAAATGATCAGACGAGTAAATGACGAGGA
AGGTATCAGGAAACTGGTTATGGAAGTATTTCAGAACATGTGGTTCAGTCCATGCCTAAA
CACCAGCCGGCCGGGAGCCCTCGACATGACGGCGGCGGCCGCCGACCCTCTCACCAGGAA
AGTACTGAACATCACGGACGTTGTTATTTCGTCCAGAGACATCGGTCTCGAATGGTTTCA
GCAATTACTTATGAGCTTATTCAAACCTAAAGAAGATAAAGATGATTCCACTAAAATAAT
TTATCAACCGCCTAAATCGCTGCTAGTAGCTTGTCAACAAATAGTCGACTGTCTTGTAGA
GAGCTTACTACAGTTGGAAGAGACTAGTTCAGAAGGTTCCAGTTCACCACAAAGAATTTT
AGCGTGTCTCTCAACTTTGCATTTATTTGCAAAAATCAGACCGCAGCTGCTTGTTAACCA
TGCCTTAACTTTGCAACCGTATCTCAGTTTGAAATGTCAGAATCAACACGAGCAGCAAAT
AATGTCGACAGTGGCGTCCACTCTTGAACTAGTCGTACCGCTAATGGAACACCCGAGTGA
AGTATTCCTGGCTCAGTTGGAAGAAGATGCCGTTAAACTTATTCTGCAGCGTGGTCAACA
CGTCATCGCTTCGTGCATAGCCTGCTTAGCAGCTATAGTCAACAATCTCACGCATAATTA
TAAACTAATTAGGGATGTATTTAATAAATATCACGGGGTCCTACTCCAATGGAAAAGCAG
CTGGCAGCGAAATCCCGAAATGACACGTTCATCACATTCGAGACCTCATTTTCGTCGTGC
ACTTTTCATCGTGGGCTTATTACTCAGATACTTTGACTTTACGGACGTCAAAGTCATTGA
TGGTCTTCCAAACGACATAAAAGAACAGGTTTATTCAACGCTGATGTTTTTTGTGGGTTT
GGAAGATGAGGACTTCGTCTCACATACTCTTAAAGCCCTGGGTTCAGTGTGCGTACGGCA
TTACGAATTCATGTTACGCCCTGAACTCAAAGAATTCTACCATCAACTACTGACCTCAGA
TTTAGCTCCGATAGAAATGAAAGTGGACGTATTGAGGAACATTGAAATGTACTTACAAGA
GGAAGAGCAAAGAATGATAAGGCAAGATAAAGAGTGGTCAACAAGATCAAAACATGAGAA
TCTCAAAGAGATGGGTGACGTATCATCGGGCATGGCGTCGACGGTGATCCAGTTGTACCT
AAAAGAAATCCTCGGCTCGTCCATACATCACAGTACGGTCGTGCGGTCCGCCGCCATGAA
GGTTGTACAGCTCGTCTTGGCGCAGGGGCTCGTGCATCCTGTACAGATTGTACCATACTT
AATAAGCATGAGCACGGACTTAGAGGTAACAGTGTCACACACAGCGGACAAAAATCTTCA
GGAAATAGATAAAAAATATCCCGGTTTCATCCACATGAAAGCGCAACTAGGAATCAAACT
ATCATACCAGTTACAAAAAACTTTGCAGTCGAACAGCAGAGAAAAAAACGTCATAAGGGG
ATTTAGGAAAAAAGAACTAGATGATCTACCCACTGCCCTTAACGGGTTTTTATATTCACT
ATTGAGGAACACAAGGCCGCAGAGACGAGCTTTAATTTTGTCATTACTAAAACAGTTTGA
CGATGTGTCGACTGCTCCATTAGATCAGATGCTGTACCTGGCCGATAATTTAAGTTACTT
TCCATATCAAGTACAAGATGAACCATTGTTCATAATACATCATATAGATATCATAATTTC
AACGTCAGGGTCAAATTTATTACAGCTTTTTCGTGAGGGCTTAATAAAATCCAATGCAGG
AGAGAAAGGTACCGCGGAGGAAGAGGAGGAGGAGGAAGAAGAAGACGCAGAGGCGTTGGA
GGCGCGGGTACCGGACAACACGCGCGCGCTGCGGGACGCCATGCGCCAGGCGCGCGGCTG
TCTCCTGCTGCTCGTACTCAAACAGCACCTCAAGCAACTCTATGGATTCACAGATGCTAA
AATCAATCAATATTCTCCATCGGAGAGTGTGAAAGTATACGAGAAGGCGGTGTCTCGACG
GCACGCGCCAATATTCGAGCCCAAGGCCACGATCTTGCAGCTGCAGGAAGACGAGTGTGA
AGACGAACTCGACAGACGCGGCCGCCGTAGACTCATCAACGATTACCTCGAATTGAAGCA
GCTAATGCTGAAGTTCGACCCAGAAGAGGAGGACGAAGAAGAGAGTGCGGCGGGCGGCGG
TGCCCCTCCCCCTCCCCCTACCTAGCGTCCCCTTCCCTCTGCCCCTCCCGCGCCCCTAGA
CTGACCGCTCCGCCGACCGACCGCCGCGTTACTTCGATCGGTTTATTTATTAGCGCTCGA
GAGCCGGACGAGAGCCGCCTTGTACAGTGTCCGGCGACTCCCGCCCCGCGCCCTCGATGC
GCCCGCGACGATTACGACGTCTTTGTACAACTTATATTTGATAAACTCTTGTTTTTTTTT
TATTATTATTTTATTTTATTGAAAAGTCTTGTGTGTAGATAATTTTTTTATGGAGAATAT
AAAGTGTATGTATGTACCTACTCTGTTTTGCGTTTCCGTGTGCCGTGCCGGTGAACGGCC
TAAATTGTCACCGGTGCGGCGGTCGGTGCGTCCGTGTGTCCGATCGACCGACATCTGTTA
AGATTTTTACTTATAGTTTTTTTTTTTTGCATAAGAGAGAGGGTACCCGTTGCAATGATT
TGCATTTCTTATAATGATAATTATAATATAAAAAAAATATTGTAAATAAATCGATATAAC
ATTAAAGTTACGAAGTTAG
(6919 bp)

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