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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70568_c0_seq1
Scaffold_idBomo_Scaf335
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_znrf1_isoform_X1_[Papilio_polytes]
Ontology
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0008270 F zinc ion binding
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030054 C cell junction
GO:0042734 C presynaptic membrane
GO:0045202 C synapse
GO:0046872 F metal ion binding
Transcript
Level		FPKM:6.91 TPM:12.05
ORF EntryO_BomoEE23033_complete:A_BomoEE_comp70568_c0_seq1
Sequence
(Nucleotide)
CTTCTTTTTTTTTCTTCTTTGTTTTTTTTTTTTTTTTTAAAATTTAGAAACAAATAAAGT
TTTATTTATGAAGATGAAAAAGATGAAATCATACAATATATAAACGATAAGCTTACAGGC
AGAGATATGTAAACCGAAGCGGGTCGTTTCGCGCGACCCGGTGACGTCACTACCACACGC
ACGGCACGGAGTGCACGAGTTACTCAACTAAAACGACAATATTACTAAATTATAAATAAT
CCACCGAGAATTTCCCAACTTTTTTTTTCATTTTTTTTAATATTAATTTTTGTTTCCTAT
AATTGTCTTTGTTAATAATTTTTATTATTATCATTATTATTAATATTATTTTGTTATTGT
TTAAATTCATTAAATGGTAAACGTCTCACTAGCATAAGTTTTCTTTTGTTTTTTTTATTA
ATATTTACAATGCCCTCTGGCGTCACAGTCTGTTTGAGCGCACTAGACGGCGCACTAGTC
GCCGGGGTGCTCCGGACACGACCTGTTCACTTCGAACCATTGATCTATGCACCCTTTATG
ATAGATGCAGAGGCACGGCAGACGGGCGATAGTGTCGCCCGCGGACAGCTCCTCGAGGCA
TATTACACATTCGCCTTTCGAGTCGCTCAGAACATCCTCATTATAAGATAGACGTGGCCT
CGTCAGGCACATTACGAGATGGCACTCTATGTCGTCCGGTAAAACGAACTTGCTGCACAC
CGGACATTTTATACCATTTATTGACCAAATATGTGAAGGCAAGGAGTGCGCTGCGTAAAC
ACGGCCCAGAGCCAGCGACGCCGCCGGTCCGGCACCAGTTTCCTCATTTGAACTAGAATC
TGTGTCGGGGCTCGCAGCTGCAGAAGCCTCATAGCTCTGCGAGTTCGGGGGTATGGCTAT
TGCTTCGTGAGAAGCGTGCAGGTCCGGCACTGAAGACAGAGACCGAGCGCGCTGCCGGTC
ATTCGACACTTGAATTCCTGGGATGGCTCGCAACAAGCTAAACCCTGCCGCGCCCGACAC
CACGTCCGACCCGGAGCTAGTCGAGAATGTCCTTGCGCGAGGACTCTGCCCCCCGTTCGC
AGTGCTCGCCTTTGCACCCATAACGACTCCGTTACGCAAATCTCGAATATGTCATGCACT
GAAACTGAAGATCACGAGAACTCGCGCGATTCGGCCGACGCACCGGCCGAACGCATCGTA
CGAAGCACGGAAACAATTGCGCGATTAATTAAATTAGCACTTGAAATACCTACGACAAAA
CGATATCACTTTACTCTTTGCAGAAACGTCGCAAGATTGTAAACAGGCTCTACACTTCTG
CAAAATTTTGACAGATTGTCTTAAGACATATGAGACGAGCTTGCGCCTAAACAACACTCT
GGAATACAGTCTTTTTAGACAACATTAATTAAAAGTTCTCAGGTTACAACTAATTAGATA
ATTCTGTATCCAGAATATTTGAATAGCAATGATAATTTGGCACCCATACGTGTACCACTA
GTTCTCATATCTGCTGCAGATCATGTGTTTCAATTTGAACGGTATTCCAGGCGAAATATT
ACAAAAATAAAACTTCGACCGCGCGTTTTCACTCTGCGGTATCTACGGATTACGGTATTC
CCGTAACACTAAATGAATTCGTTCATCTATGAAGGCAATAAAACAAAAGTGGAATTCTGA
AAATCTAGTAAATTGCTAGTGTAGTTGGAAGGGTGTGGCATAGCCATTTTACTATATAAC
TGAGAACTAGATCTCATATACAGATATATAGTGAAAAGGCCACACAAAATTAGACACATA
ATAATATGTTTATAACTGCTTTTTATTAAGAGCACGATATTGCACTCGCTCGGCTACGTT
CACGGATTGGAAAACGATCGGGGCGCTAAAATAGCGTAACGCTTGAGCTGATACAGACTG
ATCTACAAGCATTTGAAACCACAACCATAGTGATCTCATTTCGGGGGTAAAATGCAATTT
GGGTAAAAAAATATTTGTTTCTATTTGCGCGAATTCTATCAATCGAATGAACGGGTTAGA
TTAAATGGAATATTTTAACTACGGTTCATGAACGATACCTTACTTTGTGATTTGGTGACC
AACATGTGTTGAAATAAACCAAGTAATTGCGCAAACTAAATGATTTCTTTTTAATTTTGG
GACTTATATCACATTTACCATTATGAGTTGGCAATTATCCAAACTAACAGGTTAATTTAA
TAAATTAAAAAAATATACATCGTATTTACTAAATTTTATGATGATTATGTATAATTACCG
GCCTTAATATATAATCACTGAACTAATCACATTTACCTTAACTTAAAATTATAATGTAGA
CCTACGTTAAATTCGCTATTAAAAAATAGATTTCATTGATTTGATTTTTTTCCTACCCAA
GCTGATGGTTTTGAGAGACCATGTCAGCGTCGCCGGCTTAGCTCATGGGCTT
(2452 bp)

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