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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70537_c0_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101735722_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006979 P response to oxidative stress
GO:0007275 P multicellular organism development
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007350 P blastoderm segmentation
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0008340 P determination of adult lifespan
GO:0008359 P regulation of bicoid mRNA localization
GO:0042070 P maintenance of oocyte nucleus location involved in oocyte dorsal/ventral axis specification
GO:0043565 F sequence-specific DNA binding
GO:0045450 P bicoid mRNA localization
GO:0045451 P pole plasm oskar mRNA localization
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0048813 P dendrite morphogenesis
GO:0060322 P head development
GO:0060465 P pharynx development
Transcript
Level		FPKM:1.98 TPM:3.44
ORF EntryO_BomoEE22871_complete:A_BomoEE_comp70537_c0_seq1
Sequence
(Nucleotide)
GTTATGATATTTTTTCCAAATTTTTAATCTTTAAATGACTCTTCTGTGATGTTGCAAAAC
TGTCCCTTAAATTAAATAGGCCTTTCGCCTTTAAATAGTTCGTGCGCCCCTGACATATAC
AGTTCAGGGAGACTATAGCGGTTAGTTAACGCGCAATGAAAAGCGAATCCTATGAGGTCG
TTCACCCCGTCAGTCGAGTTTGTATTGCATTGCGCCGTGCATCGCTTCTGCTACAAATAC
AACCCGTGTTGCTCGCACACAAAGCTCAATTTAATATGTATACTAAAATCGTCGGAATTT
ACCGAATGAATAAGACTTATATCGCCATCCCTTTCCCTCGCATAATAATTTCAACAAACA
AAGGTTGCATCCCAAAATCTAATTTGGCAGTAATATCATTGAGAGCATATAATTTACATT
GTGTAATGTAATAAGCTGATGAAGATAAAGCATGATGAAATTTTCTCATCTGTTTTTCAA
ATACTTTTCTATTTCATAATGACGTGGGTATCAACAATAAAAATAATCAGACTTTTTTTT
AAGCACATAATAATATGTTATATTAGAAATGAATAGGAAGCGAATCATAAAATTAATTGT
ACAACGTTAAACCAATTTGTTACTTGTGCCTTAATGCTTAAGGTCGATATTAGGTCGCAT
CAAAAACCTACGCTTCCAATAATAGTGGTGGAGGGTGGTGTAGGTGCGAGAGGGACGGCG
ATACGTCCCGCGAAACCGATCTATATATACAAAATGACGTATGTACTAAATTACCCTTTG
CCCGTCCGCGCCTTAATACTACGGTTGACAGCTGTCAATTTTGGCAGGTGTCTTTTAGAT
AGTTCTGTCAGTCAGATAATTCTGGCCGCACTTAAGAGTAGACCCCTCGCTGGGAGGCAG
CGGCGCGGCGGAGCGCGGCCATGTGTCACTGGTCGTAGTGCTTGGCTTTCCTCTCCATCT
CATCATCCGAAGTCCTGTTCATCGGGTGATCTTGGTGTTGAGGCATCTTCGGCACGAGGA
CCACGTTGCCGTCAGCCGCCTGCTGCAGCGAGTACTGGCCCGAGGACAGCGGCCTCCCTT
CGGGGTCGCGGAGGTTCTGGAAAACGTGTCGGTATAGGGCCGCAAACCTCTCCTTGAGCC
TCTGCCTCTCGGCCAGCAGACTGTGGTGGTCCCTCTGGGTCCTCAGCTTCCTGTCCCGGA
CGGTCCTGACCTCGTCCGCGAGCGAGGTTATCTGGTCCAGTTTCCGTTTCCGGCAGTTCT
GTGCTGCCACTTTGTTCTTGCCCCGCCTCCTGATGTCCCGGATCAGCGACAACTGCGCCT
CGCTGAGGTCGTGCTTCGACAGTCTCTCGTTGAACTCGTCCATGGGCAGATTAATGATGT
CCTGGACTTCGAGGGGGATACCTAATGCCTTGGCCCGTTTCTCGTCTCGGGACAGATGCT
GCGCGCTGGTGCATGATGAGCCCCCGTCCGAAGCGCTACCGTCGGTGAGTCGGCGAACCC
TTTTGTCGCGCACGGTGGGGGCGTGCGGGGGCGCGGCGAGGGGCGCGCTGTACGTGTGGT
TGTGCCGCACGCGCTCCGGGACTCCGAACCCCGGCCCCACGGCGCCCTGGAGCAGGGCGT
GGCTGGAGTGGGGCGCGTTCAGCTCTAACGCCGGCTGCAGACCCGCCACGTGGGGCGGAG
CGACCTGGTGCCGCCCTCCGAAATCGTTGTGCATGTGCAGGCCCTCGTGGTGGTAAGCCT
GCTCCGGACACTCGTACTTGACGGGAGTAGGTCGCTGCGTCTGCACCGGCTCCATGGGAG
GCGGCGGCTGCTCCTGAAAGCATCTCTTCCCAAACATGTGGTGCTTCTTCTGGGGCTGGT
GGGAGGCGGAGCGCTCTCTGCCGTAAGAGCTTTCGAATGGGCGGAATTTGGAACTGTGGA
ACTCTTGGGCGGAATCGCTACCGTCGCACCATTCGCCGTCCGAAAGCGAAGGCACGCGTT
CGGAGCCCATCGAGGAGACGGCACTGTCTGATGCGGAATCACGCTCTGGCACCATCATGT
GGGAGTGGTTGTGGTGGGGGCCGTGGTGGGAGCTCGCCCCGTCCAGCATTCGCATTGTGT
ACATTCCTTCGTTCATCGCCATATCCATCAGCTGCAGGTCCTCGTCGTTGAGGATCGACT
GGAGGAAGCCGTCCTGGTTGACTGGCCCCGGCATCTCGGCGGGCGTGTTCTGATAATAAA
CTCCATCCTGCTGTTGCGAGGGATGAGTACTCTCAACTTTGTACCCCCCTTCTATGGGAG
CAGTTGCCCCTACGTACGCATCCGGATGTTTATCGGCCACCGGAGCCGGGAGGGGTGCGT
GCGGCGCGTGCGGCACGTGAGCAGCGTGAGGTCCGTGAGGTCCGTGGGGTCCGTGAGGTC
CGTGGTAGTTCGGAGCATAGCCGGCCGCTCCATGGGCGCTGATGTTGTGCGGGTGCTGGT
GGTGATGGTGGTAGTGTTGGTACTGCTCCGGTGGCGGCGGGATGGTCAGCAGAGAGGCGA
GGTCCTGCCAGCGTTGCTCCACCGACATCGACCGCATCAACGACTGGTTGTGGTAATGGG
CGAGGGGGTGGTGCGGGACATGCCGCATGGCAGGGTGCAACATGGTGCTCCTGCGATCGG
TGCTACTCCCTTCTACCGCCTCAGTGGGTTCATCTTTGGCTTCAGCGCCGTCTCCGAGTT
CCACCAGCTGAAGCGCCTCCTCCAGCAAATCGAAGCGCGACTCCTCGCCGCTCACCAGCT
CCCTGGGCAGTTCTCCTTGGATCACGTATTCGCCGGTTTCCGTGTCGACGGTGTAGGATA
GGCCAGCCCAGGGATCATCCTCTTTGACTTCGGGATCCAACAACGAAGCCTTGACCTTCT
CTATCTCAACCTTCTTCAGCTCTTCATCTTCATAGTTCTTCTGGATCCTATCTTTGGCCT
TCAGCAGTTCCTTGTCGATTTCCTCCCCCAATACCTTCGTGGCTTGCGGACCTTCCGGCT
GTATTGGATCTTCGAGCGAGAATCCCATGTCCACGTCCTGCTTCCAGAGCACCTCGATGA
GATCCATGTCCTCTTGCGTCAGTTCATCTCCAGTATGGTTCCCCTCATCAGGCTCGACCT
TGACGTCATTATAGTCCAACGGCTCGGTTTTGACGTCGGATATGTCCATCTCGCTCACGC
CACTCGAACTGGCCGACGTGAAACTAGTGCTAGCTCTTTCCCTCTTAACGTCCAACACCA
GTTCCTCTTCAAACATTGGAGCCAATTCATAGACCTCCGCTTCCAAAGGAGTGTTCTCAA
GGAGATACTGTTCCAAGTTCTCCTGCTGTTGTTTTATGTCTAGTTCCAGGTCGTGTTTGA
GGTCCGGATCGTCGGTGAAGACGTCCCCATAATCTTGAAGGTCGGCCATATTCTGGTGAT
ATAAATTAGGCTCCTCCACCTCGATCTTCTCGGATCTTGCAGCAAAATAAGTCGCAAAGT
CGATAGCGTTGTCACTGTAAAAGTCATCGGTGTTCGATTCGTTGACCTTGAGGTCGAAAG
CCTCGTCCTGTTCCTTTTTAATTTGCATATTGTCCTGCTGCACCAGGAACTCGGTCACGT
CGAAGGTTCTGGAAGCGATCTCCGGAAATATATCCGATTCGGTGCGATTGTGGAGGAAGT
TGTCCGACACCGTCACCGTGGACTCGCGACTTTGGTCTTGGGCGTCCTCGTCGGTCACTT
TGACCTCCTGGGCGACGTTGTCGTCCGCCGAGACGGCGTCCTGGTCGGTTGCGACCGACT
GGGCCGCTGACACGGGTTCGACTGCGCCAGTTGCGACATCGTTCAATAAATATGTATGAA
GAATCGGGCCACGGTTCTGCCACATCCGGGCATTATGTGCGCTTGGACCGTACCGGCCCA
AGGAGTTGAGCTCTTCAAACAGCTGCCTCTCGTAGTTCACGAGGATGTTGTCCAGGGACT
TGGGGTGGACGAACCTCGGCCGTATCAGCGTCCGGGCCTCCTGTTCCGGGGACAGGTCGG
AACCGTTCGCGATGTGCAGACCGGCCAGCAACTGGGTCTCCCGTTCGAGGTAGTCGTCTG
GGTCGATCCTGAGCAAACTCAAAACCAGAGCCAGGCGAAGTAGCTCGTCGCCATATAGTT
TCTTCAGGGCGATCATTTTCGATGTATCAAAATTGTATTAGAATAAACTAATATTGAGCA
CTAAGATATTTTGAGATCAGATATATTTATTTATAATATGTATATGATATTTGGGGCTTT
TATATACGAGTCCTTATTTTGTTACTAAAATGAATTTCCTCTCCGATCCTCCTTTTGCGT
TTATCGGGAGACATCTTGGTTCTTTGTCACTTTCGCCCCGAAAAGTACCATTTCAGCGTA
AACGTATACATTTTGATGCACACTACTGAGTCAGTTGGGATAGAGCCAAAAAAGTTTTTT
TTTTTTTTTTT
(4451 bp)

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