SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70435_c0_seq12
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		PREDICTED:_ER_degradation-enhancing_alpha-mannosidase-like_protein_2_isoform_X2_[Bombyx_mori]
Ontology
GO:0001948 F protein binding
GO:0004559 F alpha-mannosidase activity
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006491 P N-glycan processing
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0097466 P ubiquitin-dependent glycoprotein ERAD pathway
GO:1904154 P positive regulation of retrograde protein transport, ER to cytosol
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_BomoEE22571_complete:A_BomoEE_comp70435_c0_seq12
Sequence
(Nucleotide)
AGGTACCTACGCTTTTTTGGTAAATAGTATCTTTGTTTATAGTCATTGGCCCTTGATAAC
TGCTTAATTCCCATTTATTTCAGAGAGGAAGTACGTGAAATGTTTCAACATGCATACGAC
AGCTATTTAAGATATGCATATCCTTATGACGAATTACGTCCATTGAGCTGCGACGGTGTT
GATACCTGGGGCAGTTACTCACTCACCCTCATTGATGCATTGGACACGCTTGCCATTATG
GGAAACTATAGTGAATTTAATCGAGTAGTAGATATAGTACTACAGAAAAGACACTTTGAT
GCAGACATTAACGTTTCAGTGTTTGAGACGAATATTAGAATTGTTGGCGGTTTATTGAGT
GCTCATTTACTGTCACATAATTGTAAATTTTTAGAACTGGGATGAAATTAGAACCAGGCT
GGCCATGCAATGGTCCTTTACTTCGTTTAGCTGAAGATGTAGCACAGAGACTAATAGCTG
CATTTGATACAACTACTGGAATGCCTTATGGAACAATTAACTTGCGATCAGGTGTTCCAC
CTGGGGAAACTAGTATCACATGCACTGCTGGAGTTGGTACATTTATAATTGAGTTTGGTA
CTTTGAGTAGACTGACAGGAGATCCATTGTATGAAGAGGTAGCTTATAATGCTTTGAAAG
CCTTATACCATCATAGATCACCAATTGGTCTCCTTGGCAACCACATAGATGTGATGACTG
GACGCTGGACAGCTCAAGATGCTGGAATTGGTGGTGGAATCGATTCTTATTATGAATATT
TGGTTAAAGGTATCATACAACACTTATAATCTAACATAATAGAACTTAGGCAATAAAATA
TCATCAGTTATAATAAAAATAATATATGTGTGCTGTAAACGTGCCACATTATATAGATCA
AACATTAATTAGAGATATTCGATTAAATCAGCACATAGGACTCTGGGCACTTGCCATTTA
ATGTGCCAAAACAGTAGCCATTTTTTATTTCGAAATACCCAGCAGTTGTGAATGTCATAG
TTAAATGGGGATATTTTCAGAGTAAAATATGTATAAGCCTAAACCATCCTAAACAATCAT
TATCTCCAAATACATTTAACTATTATTGTTGTAGCATTTTTTTTTTAAATTGCTTGTAAT
TTTAATGAACTAAACACAAACAATTACAATAATTTTCAGGTGCCATACTACTAGAGAAGC
CAGAGTTAATGTCCATGTTCTTAGAAGCACGTCAATCTATTGAGAAGTACCTGAAAAAAG
ATGATTGGTTTGTGTGGGCCACTATGTTGCGTGGGCACGTCACCTTACCTGTCTTTCAGT
CTCTTGAATCATATTGGCCAGGTCTTTTAAGCCTCATAGGCGAAAGTGACGCAGCGATGC
GCATAATTCACAACTACCACAGCGTGTGGCGCCAATATGGATTTACACCTGAAGTGTACA
ATCTCGGGACGGGTGAGGCGTCTTCGTCACGCGAGAGTTATCCCCTACGACCCGAACTCA
TAGAGTCAATCATGTATTTGTACCGAGACACCAGAGACCCTATACTGTTGCAAATGGGCG
AAGATATTCTGAGGAGCATACAGCATAGTGCCAGGACACCGTGTGGGTATGCAACGATAA
AAGATGTTCGTGACCATCGTAAAGAAGATCGCATGGAATCGTTTTTCTTAGCCGAAACCA
CAAAATACCTGTACCTACTGTTCGATCCGGATAATTTCATTCACAACCCTGGGGTCCGCG
GTACTGTCATCGACACACCTAATGGCGAATGCGTGGTCGACCTTGGCGGATACATCTTCA
ATACAGAAGCACATCCGATTGACCCTAACATGCTGTATTGCTGCCATGAAGCTAGACAAG
GTATAAATATCAGCGAGGTTTACAGTATATACCAAATTTTGGAAGAAGAAGATAATATAA
AATTTATGACTATGATAGAAGCGAACACCAATGAAACTAAGATCACTCAATCGAACAACA
ACAATAATGAGAGTGCAATAGAAAATAAAACAATTGACCACACAGAACCGAAGGAAAGAT
CAGATGAAAACGAGCCTGAACAAAATCAAGTATTGATAAAAACTGAATCGAGAACCGGAT
ACGTCAACCTCGACGGAACGGAAAGGGAGAACGCAAACGAATCAAACCTCAGTGATCTTG
TTAAAGAGACGATCAATAAATATTACAACGACACTATAAATGCCGAAACACAAGAAAATG
TTAAACATTCAGCCGAAGAACCAACGGCAGGATCGTCGCAAACCGTTGAAGTGGACGACA
TAATCGTGCCAGAGAAATCGGAGGTGCAACTGCCAAGCGTCACGAAAACGAAAGAAGTAA
TGAACATGCTGCCAAAAGTTATACAAGACTTTTTGAACAGCGATTGGAAATCGAAACCGA
AATGCGAACCGCAGAAGATGTTAGAAAGGATACGTAGAGAACAGAAGTATCCAGATCACC
CGGATGTATATAAGTACGAGTTATTATTGACGCCGGCTCCGTCGTTTCTACAAAGAATAT
CGTTGGCCGGAGAGTTCTTAAATAAGAAGCAACTGGAGTTGTGATATTTTGTTCGACTGA
TTAAGTTTATAGGGGGATTTTTTATTTTAATTATTTATTGGTATTTTCATTAAAATATTT
ATTCTGTTTAAAAAAAAAAAAAAAAAAGA
(2669 bp)

- SilkBase 1999-2023 -