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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70435_c0_seq10
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		PREDICTED:_ER_degradation-enhancing_alpha-mannosidase-like_protein_2_isoform_X2_[Bombyx_mori]
Ontology
GO:0001948 F protein binding
GO:0004559 F alpha-mannosidase activity
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006491 P N-glycan processing
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0097466 P ubiquitin-dependent glycoprotein ERAD pathway
GO:1904154 P positive regulation of retrograde protein transport, ER to cytosol
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
Transcript
Level		FPKM:2.27 TPM:3.96
ORF EntryO_BomoEE22567_complete:A_BomoEE_comp70435_c0_seq10
Sequence
(Nucleotide)
GACTACTGCGGGACCTCTAGTTATAGTAAAACCACAAAATGAATTCACTCACCAAGTTTA
AATTTGTGTTGTTTAATGAATTTTTTAAACTGAAAACAACTGATTGACAACTTATGTGAT
TTAATTAAAAATACGTTATGAACTAAGCTTTTGTTACAATTACTTAGTGACCTAATTTCT
TGTTTCTAATCTTAATGATAATGAAATGTTGAATTTATGTCAATCTTAGTAATTTATATT
ATTGAATGAGATTATTATTATTGAATCATAAACATTTTACTAAATTTTACTAATAATATA
TGTTTACACTTTAATACTTTAAAGTTAAAGTGTTTACCATACCGTAAAATTATTCATACT
AAATTGTTAATAAGTTTAAATAAAAAAGTATAAAAAATTGATAGCTGTTTCTTATTAGGT
AGCTTATAATGCTTTGAAAGCCTTATACCATCATAGATCACCAATTGGTCTCCTTGGCAA
CCACATAGATGTGATGACTGGACGCTGGACAGCTCAAGATGCTGGAATTGGTGGTGGAAT
CGATTCTTATTATGAATATTTGGTTAAAGGTATCATACAACACTTATAATCTAACATAAT
AGAACTTAGGCAATAAAATATCATCAGTTATAATAAAAATAATATATGTGTGCTGTAAAC
GTGCCACATTATATAGATCAAACATTAATTAGAGATATTCGATTAAATCAGCACATAGGA
CTCTGGGCACTTGCCATTTAATGTGCCAAAACAGTAGCCATTTTTTATTTCGAAATACCC
AGCAGTTGTGAATGTCATAGTTAAATGGGGATATTTTCAGAGTAAAATATGTATAAGCCT
AAACCATCCTAAACAATCATTATCTCCAAATACATTTAACTATTATTGTTGTAGCATTTT
TTTTTTAAATTGCTTGTAATTTTAATGAACTAAACACAAACAATTACAATAATTTTCAGG
TGCCATACTACTAGAGAAGCCAGAGTTAATGTCCATGTTCTTAGAAGCACGTCAATCTAT
TGAGAAGTACCTGAAAAAAGATGATTGGTTTGTGTGGGCCACTATGTTGCGTGGGCACGT
CACCTTACCTGTCTTTCAGTCTCTTGAATCATATTGGCCAGGTCTTTTAAGCCTCATAGG
CGAAAGTGACGCAGCGATGCGCATAATTCACAACTACCACAGCGTGTGGCGCCAATATGG
ATTTACACCTGAAGTGTACAATCTCGGGACGGGTGAGGCGTCTTCGTCACGCGAGAGTTA
TCCCCTACGACCCGAACTCATAGAGTCAATCATGTATTTGTACCGAGACACCAGAGACCC
TATACTGTTGCAAATGGGCGAAGATATTCTGAGGAGCATACAGCATAGTGCCAGGACACC
GTGTGGGTATGCAACGATAAAAGATGTTCGTGACCATCGTAAAGAAGATCGCATGGAATC
GTTTTTCTTAGCCGAAACCACAAAATACCTGTACCTACTGTTCGATCCGGATAATTTCAT
TCACAACCCTGGGGTCCGCGGTACTGTCATCGACACACCTAATGGCGAATGCGTGGTCGA
CCTTGGCGGATACATCTTCAATACAGAAGCACATCCGATTGACCCTAACATGCTGTATTG
CTGCCATGAAGCTAGACAAGGTATAAATATCAGCGAGGTTTACAGTATATACCAAATTTT
GGAAGAAGAAGATAATATAAAATTTATGACTATGATAGAAGCGAACACCAATGAAACTAA
GATCACTCAATCGAACAACAACAATAATGAGAGTGCAATAGAAAATAAAACAATTGACCA
CACAGAACCGAAGGAAAGATCAGATGAAAACGAGCCTGAACAAAATCAAGTATTGATAAA
AACTGAATCGAGAACCGGATACGTCAACCTCGACGGAACGGAAAGGGAGAACGCAAACGA
ATCAAACCTCAGTGATCTTGTTAAAGAGACGATCAATAAATATTACAACGACACTATAAA
TGCCGAAACACAAGAAAATGTTAAACATTCAGCCGAAGAACCAACGGCAGGATCGTCGCA
AACCGTTGAAGTGGACGACATAATCGTGCCAGAGAAATCGGAGGTGCAACTGCCAAGCGT
CACGAAAACGAAAGAAGTAATGAACATGCTGCCAAAAGTTATACAAGACTTTTTGAACAG
CGATTGGAAATCGAAACCGAAATGCGAACCGCAGAAGATGTTAGAAAGGATACGTAGAGA
ACAGAAGTATCCAGATCACCCGGATGTATATAAGTACGAGTTATTATTGACGCCGGCTCC
GTCGTTTCTACAAAGAATATCGTTGGCCGGAGAGTTCTTAAATAAGAAGCAACTGGAGTT
GTGATATTTTGTTCGACTGATTAAGTTTATAGGGGGATTTTTTATTTTAATTATTTATTG
GTATTTTCATTAAAATATTTATTCTGTTTAAAAAAAAAAAAAAAAAAGA
(2449 bp)

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