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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70428_c0_seq1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_UHRF1-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005720 C heterochromatin
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007049 P cell cycle
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010216 P maintenance of DNA methylation
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0042393 F histone binding
GO:0046872 F metal ion binding
GO:0051726 P regulation of cell cycle
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0071158 P regulation of cell cycle
GO:0090308 P regulation of DNA methylation-dependent heterochromatin assembly
Transcript
Level		FPKM:8.19 TPM:14.28
ORF EntryO_BomoEE22544_complete:A_BomoEE_comp70428_c0_seq1
Sequence
(Nucleotide)
ATTTTTTAAGGCGCTGGCAACTTTGATGGTAAAGTCAACGTCATCTGTCATCTTTGGAAA
ACATGGAATTTGGTCTAATTTTTAGTCATAGATTATACGCTAATTTAAAACACTTTTGGT
GAAATTCGGTTAGGTACGCTTCAAATTTAGAATCATATTTATTTAGTAAATTAAAGATAT
TCCATTTAAAGGCAAATAAAGTAGTAATTTTTTACGAAAATGCATGTTCGTATCAGGATG
CTTGGGAAACCTGATACAATAGTTGTAGTGGAATCGAAACTAACAAAAATAGACCATTTT
AGAAAAATTCTACGAGATAAATTCGACGTCCAACCAAAATTACAGCGGTTGTTTTATGGA
GGAAAGTTGCTTGAAAATGGCTACACATTTCATGATTACAATATAAAATTAAATGATGTC
ATCCAACTTATGGTCAAAATAAACACAGATAGTCCAAAAAAGAGCCTCACGAAGTCTACA
GCTGATGACAAAACTGACAGTGATAATAACAAAAATCATGAACAAGAATCTTCTGATGCT
GTGTATACAGATGCAGTCAGCAAGCTCTATGCTGTTGGAGACTTGGTCGACGTAAGGGAC
CCAGAACACGGCGCTTGGTTCGAGAGTAAAATAATTAGAATAGTCCATGATCAGAAGGGA
AAGAAATCGGAACATGAAAAAGAGAAGGGATCTGACACTTCTAGTTCTTATCAAAGTCAA
AATTATGACTGCAATGACTTAGAGAACAAACCACCCATAGAAATGAATGGTGATTGTAAA
CCAAAGAGTAAAGGTATAGCTAAATACTTCACAAAAAGTCCTAAAGGAAAGAAAAAAGAC
AAAGATTCTAAGAGTGAGACCAGAATAGTTGATAACCTTCTTTATAAAGTGCAACTTGAT
AATGACGAAGACGACTCAGAATCTTACTGCAAAGAAAAAGACATAAGGCCACGAGCACGA
ACCATTATTGACATTAAGGATTTGAAAGTTGGACAAACAGTGATGGTGAATTACAATATT
GAGGAGCCAATGGAAAAAGGTTATTGGTTCGATTTCAAAGTAAGTGAAATAAGGAAACTA
CGCACCAGCTATGATTTAGTGGGAACTTTATATTTGGGTCCCGAAGCAGTACCTCAGAAT
GACACCAAAATAAGATTGCAGGACAAAATTTTTGCCATAGAAGAAGTTGTACCACTGGAA
AAGCGCAGTGATGAATACAATAGATTAATGACTATGAATCCTGAAAAACGGTCTCAACCA
TTAACTTGTTTGACTTGTCGTGATGATGAAGAAGCACTATGTAAAGACTGCGGTTGCTAT
GTCTGCCTAGGAAAAGAGTTTCCTGAAAAGATAGTGCTCTGTGACGAGTGCAACTACGGC
TATCACATGAGCTGTCTCAAACCTCCATTAAAAGATCTTCCCGACGAGGACTGGTATTGC
CCTTCTTGTAAAAGAGATCCTCAGGATGTAGTAGCGCCAGGAGCAGCCAAACAAACCAAG
AAAAAAAATGCTTCACAGAGTAAACGCGATTGGGGCAGAGGAATGGCATGTGTTGGTAAG
ACGAAAACATGCGCTATGCCTGCCAACCATTTTGGACCGATCCCTGGCATCGAAGTTGGT
ATGTGTTGGCGGTTCAGGATTCAGTTATCCGAGTCTGGCGTGCATCGGCCGCCCGTGTCA
GGAATCCACGGACGTGACGTAGAAGGCGCTTATAGCATTGTTTTATCCGGTGGATATGAA
GATGACGTTGACAATGGCAATGAGTTCACGTACACGGGAAGCGGAGGTCGTGATCTATCC
GGGAACAAGAGAACCGCCGAACAGTCGTGTGACCAGACCCTCACTAGAGAGAACAAGGCT
TTGGCCAGGAACTGCGCTGTTAACCAAATCAAAGAAGACGGTGCTGACGCAGGTGAGAAT
TGGAAGAACGGGAAACCGGTCAGAGTTGTGAGATCCTACAAAATGATGAAGCACTTTCCG
AAGTACGCGCCCAGCGAGGGGATCAGATACGACGGTATCTACAAAGTTGTAAAGTACTAT
CCAGAGAAGGGTCTGTCTGGCTACAGAGTATGGAAGTATTTACTGCGTAGAGACGATCCC
AGTCCAGCGCCGTGGGAAGCTGGGGCTAAACATTATCCCATTGTGTATCCAGACGGTTAT
TTGGAAGCCGAGGCGGAGAAGAAAGCTTTGAAGCAGAAACAAAATACCAAATCGAAAGGA
AAAGTGACAAAGAAGAGGGCGCTGCGAGAGAGCAACCAGTCTGCCGAGTCGGAGTGTGAT
ATCTCCCCTCCCGCGAAGAAACGGAAAACCGCAAGCGAGAACAAGAGAAAAGGAAAATCA
TCAAAAACGAAATCGACGACAAGCCCAAATGGTAGTATTTTAGAAATGTTCTCACCGAAA
AGAAGGAATTCTGCTAATGGGATGAAACAAGTTAAAAAATCGGAAAGTGTACTTACCAGC
GAGGAAAGGGACGCAATTAAAGCTGACACGTTGAATAGCAAGTTATGGGGCGAATGTTTG
GCTGTGTGCGATAGCTGGGGCAAAAAGGAATTTGTTGAATTTGTATCAATGCAGTTCCTC
TGTATTATATGTCAAGAGGTCGCAGCTAGTCCTGTAACGACACCTTGCCTACATAACTTC
TGTATGGCGTGTTTAAAATTGGCCTTCAAAACAACCGGAGCGATTTGTCCGTGCTGCAGA
CAGAACTTAGCAAAATATGAACCGGAGCCTAACGAAGAGTTGAAAACCGCACTACGTAGC
ATCATGACCGGCTACGACGCTGGAAAGAAGTAATTTTAAAATAATAGACTATGTAAGAGC
TAGTAATTTCTATGATAAACAAATATTAGGTTCAAATCCATTAGTAATTAGAGTTAAATT
TTCTTACCAGATTTTACAAAAAAAATGTAAAGTAAAATGTTTATGATTGGCACTCCCTCG
GACCGCAGTAGACATTTTTTAATATAGCTGGTATAATATATGCTGCGGGAAAAAAAATTC
ATCACGTTGAGATGCTGAATAAAAATGCACTGTAAAATTCACATGAACAGGTTTTTTGAA
AACGGTTTTAATTTATGGTTATAAAGTTATAGATTTTTACGAATTCAAACAATGTATTCA
TTTATTTATTATTACCAGTTAATTGTTATCTATAATAAAGTGCACACAGCAGAATCCTTT
TGACAATGATGTTTTGTTAAATTTGGATTTTTTTTTGCTCAATTTTCTAACTATAAGTCT
TGTTGGATTTGAAATAATGATGAACGAGTGAAATATTTAATGAACTATTTAAATACCAGT
AACTATAGGAATTTGCGGGTTTGATTTTTACTACA
(3335 bp)

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