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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70413_c0_seq1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		transcription_factor_AP-4_[Bombyx_mori]
Ontology
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006461 P protein-containing complex assembly
GO:0006978 P DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:0008285 P negative regulation of cell population proliferation
GO:0010629 P negative regulation of gene expression
GO:0017053 C transcription repressor complex
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0043065 P positive regulation of apoptotic process
GO:0043392 P negative regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0043922 P negative regulation by host of viral transcription
GO:0043923 P positive regulation by host of viral transcription
GO:0044212 F transcription cis-regulatory region binding
GO:0045736 P negative regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0070888 F E-box binding
GO:0071157 P regulation of cell cycle
GO:0071549 P cellular response to dexamethasone stimulus
GO:2001269 P positive regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway
Transcript
Level		FPKM:13.32 TPM:23.23
ORF EntryO_BomoEE22464_complete:A_BomoEE_comp70413_c0_seq1
Sequence
(Nucleotide)
TTTTAATTTATTTTTATATTTTCAACATAAAAAATGTAACGTCGATTATATTTATATCTA
AAACTCAAAACCTCGGAGATTGTAAAATGCAAAGAGAAATGTCGTAAACGAATTTAGTCC
CCAGGTCTACATTAAATTGCCACAGTCTAGTCTATGATTTAGGAAAAAATTAACAAAAGG
TAGTCTATGGTCTTCAGTGCATCGACGTATTGTTGCCCTTGACTTGTGTAAAAATTGCTG
TTTTTCTGTAATTGATGCATAAAATTTTTAATACCGAATGTTATTATGTTGGTTTGATGT
GTGACTAAAGGACTGTACAACGGATTTAGTGTGTTGTTTAGTGATATTGCTTTTAATTTG
CGAAGCGTCACCTGACTGAACTCATTGTCATTTCCCGCCATTGTGGCTCGTGTGTAAACT
GATGGATATTAGTTAACGCCTTGTGCATCCTCTGAAGTATATGAGGAATAAGTAGAAAAC
AACGACTAAGGAATGTCATTGCACGGTAATGACGTTTGTTTACTAGAAGTAGAAGATTAC
AACTTGTACGAAGAAGAAGCATCGGATCACACGTTTGTCAGTGAGAAACATTCGACATCA
GGGAGTAAGACAATGGAGGCAGAAAAAAGGATTAGACGAGAAATTGCCAACAGCAATGAA
CGCCGACGAATGCAGAGCATCAATGCAGGTTTTCAAGCTTTGCGGACTTTACTTCCACGT
CATGAGGGCGAAAAATTAAGCAAAGCAGCTATTTTACAACAAACTGCAGAATACATTTAC
AATCTTGAACAAGAGAAAACAAGACTACTTTCACAGAATTGTCAACTAAAGAGATTACTA
AATCAGCATGAAGGAGGTGAAGTTCCATTGAAAAAAAGAAAAGGTGATATACTAACACAT
ATACCATCAGTCATACCTCCTGATTCTACAGACGATACTTTATCGAATTCACGATCACCC
GAACCAGTTGCTGTTATAACAATGTCAAACACATCACAGAAAAAAGATTCTGAGTGTGTA
GAATTACGGGCGCAACTTGAACAGGAACGGAGATTACGTCGCTTGCTTGCAGAGCGGTTC
AACGCACTAGAAACGCAGGTCTATCCTAAAACAGGGCACGACATCGCGCGACCTTTATCA
GGCCCTATCGAACAGACTGAAATCTCAGACTGCAAAGTGGAGAATGAAGAAATTCCCATA
AAACCTGTTGAGCCACCCCCACCCACAACTCAATTACTTGAAGCCGCCATCAAGGCTGAG
CCCCGAGTGGAAGTCGAGGTACTGCCAGAGGCGAATCAAGACAGCTCTTCGCGGCTCTAC
CTAGCAAGCACGAGCCGCCAAAACCTCGAGACCATTGTGGAGGCTATCCGACACTTGGAG
GGCGACCACCTGTTTCGCGAGGAGACGGCCGAAGCGCCCCTAGCGCTAACCAAGAAGCCG
AGTGCGCCCCCGCCACGACCCGGTGTCATCGTCGTCAAGCACTTGTGATCGCCTCGACGA
GCGGTTTAGACTTTTAGCTCGTAAAATGCTTATCGCTTAGCGAGCGCACCTGACCCTCCT
CGAATGTAGTTTTAAATTTTAGTTATTTAGTTGTATCTTCCAAAGTGACGAATCGATAAG
TCTGCGTCTTTGTTTATTTTATGCATTGAAGTCAAATAAAACACGGTAGATTTAGTCCTC
CGGGTGAGCATTCTAATGGACGTATGGTCTCAAATATTATTATTTCATACTGTTGTGTTA
TTTTTACATGTAAAATTATTGTAACTGTGTTAGTGAAATGAGGGGTGACTGAAATATTTG
TCGCGAGTTCTAACTCATTGCTTAAAAATATATGGATTGATTGATCAGAAAAATATGTAC
AAAAAAGCATCATTATAGTGAAGAATATTTTAGCCGAGATACAAGCCGCGTTGGAACTGG
CGACGAATGGTAGCAATGCAGTACGCCATGTGCCAAAAGTCGAAAGATGGCTAGGTGTAT
TGTAAATTTATAATGAATGTGTGGTTTGCATTAGTTACGAATTGTGATATTTTTACTGGA
ACTTGAAAGACAATGCAAAAAATCAAAAAATTATGATTAATCTACCATAAACCAATAAAA
CACTCATATATCTACGCTAAAAAGAGGGATTTTCGAAAATTTCAGCAATATGCAGCAAGT
TAGTAAAGTACCACTTAATCTAATAAAAGTATATTAGCTTGAATATTTTAAAATAATTGA
AAAACAAGTATTGACTAAGCTTTGTAAATTTTTAAAATGAACATCATTTTATAAGTTAAT
GAACATTATAAGTGTTGCAAAAACAGCTTACAGCTATGGAATAGAGAGTATAAATGAAGA
CCCTAACTATTATGCTCTATAGCTTCCTGTAAAAATAATATATGAAATATCTAGTAAATG
ATTATAATTAGGTTTAAAACAGCAATAATATATTTAATAAAAAGTTGACATTGAGAGATC
TGAAATAATGATTGCTTCAAAATGTATTTTATAGGGCAATATAACTTTGAATGACCATAT
TGTAAGTTTTCTTGATAATATTTAACTGGAACCCCAGTGCATAGCTTGATTCTTATTCGG
AATTAGTAAATTTAATAATGGTATTGTTCGCCATTGCATTTTGGGGACAAAAATACCCCT
GCATTCCATGTTGTTGAATTCTTTAAAGAGGTATTCCCTATATTGCGTAGTTAATCGAAT
GAGTTAGTGTGTATTTTAATCAATTTAAATTACTAGTGTAATTTACTGCTTAAAAATATA
ATTACCTACTTAATAATATATATTTATCTACTAGTATTGGAGTTATATATTTTAATTGAA
AATTTTATAGTTCAGTGAATGAAAATTTGTGAAATTCAATAACCTTATTCAATTTAAAGA
ATTTCCAATGTTCAAGTTTCTTTGGTTTTCAATTGTAAATTAGAAGTTGTCATGGTAATG
TTTTATTGTGTGGACAAGTCTACCAAGTAAGCAATTGCATATGTAAGTCGATTTGGCAGA
TAAATTGATTGATCAACATGATGAAATTGTTAATTTTAATTACATATGCAGTCTTTGACA
TCGAAATAATATAGCAATCATCAAAAAGATATAAGAGAAGTATAAAGACACAATATAAGA
AAGATGAAGATAAACAGAATGAAAATTTGAAAGTGTTAATTTCTTTCTTGCGTGTATTGT
ATTCAAGGTAGTAGCGTAATTATATATTTTAAAAATTCACAAGAAAAAAGAGCTGTCTTT
TTTTTTTTTACAAGAAACTTATTTTCATTTTCCGATTGTACTCTAGACAACCTTTGTTGC
GATCGAAAGGGATCCGAATAAATGTTAACGTGAACAGTGATTAAGCTAAATTGCATTCAA
TTGCTGACATTTTTGTTAGAAATACATATTGTGCTTTTGTTATTTAAATCGTAAGTTTTG
TGTGTGTGTATTTTAAGTTAGACTCAGTAACAGAGTGAAACTGATTTAAGTACAGTGTAC
TTCAGGTAGTCTTATGAGGAGTCATGGATTTTTAAGACTGATCAATTTTCATTATTAAGT
TACACTACATAGTTCAAGTAAATAATAATAATAGTATAGTTTGTGTGCGTGTGTGTGTAT
GTGTGTTGTTTATGTATCTTGATGTTTATATGTACATTTAATATTTTAATGCCTTTTGGT
GGACAGAGATCACTAGTCGATTCATATTTTGTAAAGAATTATTAGTTTGTAGACAGATAA
ATACTTAGTTTCTAGAGAAATTATCCTTTATTGCTATGAGGACTGAACCATTATTATTCT
GCACTTTATGCACTTATAATATCATATTTCTCTTCGTTAATAATTTGAATGAGTTTGTAT
TAATTTATATTAAAAAATCATAGTGATCTCTATACCTTTAGGCAATAAATATACAATGTG
TGCTTCAACGAAATGCTCTTCTTCATTATGGACGTAATCCTTGTATTGTGTTTTTTTAAT
AGACCAATTATGACACCGATTTAACGTCCTGTAATAAACTTTGTGGTTGCACATATAGTG
GTGTGAGGTTGCATGTTTAAAAATGCAGCTGAATAAAATATTAACCCTTCCTCTTAAAAG
ATGTAATTACAGTTGATTCAGCGATATCTTAATTTTTATTTACGTTTATTTCATTAACAC
TCTACCACAGCTGTTTGTTGAACTATATTGATAGAAAGACAGAAGTCAAAGTCTTGTTTT
ATTTTAATTTATATCAATATATGTAATTTAACTATATTAATCTTTTGAATTACATATTTT
CTTATAAAATAACACTTTTTTTAACAGATAGAAATGAGATTAATATTTCTTGTGCGTTTG
AAATCGTTTTCATAGTTGGTTGCCATTTTTCTCCCGAGAAAGCTCATTACGTCACTCTGT
TTCTGAGTCCGTAATTTTAGAAGTTGCCTACCGCCTTTAAATTATGTCATAGGATAATTA
TTAACTATGTAACATAACAGACTTGGTTATACTATTAGTGTAGTCAGAATAGAAGTAAGA
GATTTTAAGTCAAAGAAACAAGTTAAATTGTTTAAAATGTGTTATTATTTATGTCGTAAA
GTATTAAAAACGGTTATTTCTTATTAATTAGTTTGTAACGGATAGCAATCGTCTGTATTT
TAAAGCTAAATATTTTTCTTGTCGAGCCAAGTCTACATTCATTCTTTCATACAATGATTG
ATTGATTCTTGTGTAAAAATTGTAGTAATTATTAATAAAAACTTATAACTTTATGAAGTA
GGTACCAGTTTTCTTCTTTTTTTTTGCAATTGATATTATTTTCTACAGATTTAACACAGA
ATCATTCAAACACTCAAATTCAAGCAGAGAATATTTGTATGTGTTTAATACATAATGTTC
ATTATCTGTTGTTAAATAAAAAAAGATATTAATATCTTTTTT
(4902 bp)

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