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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70400_c0_seq2
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		integrin_alpha-PS3-like_precursor_[Bombyx_mori]
Ontology
GO:0001968 F fibronectin binding
GO:0001974 P blood vessel remodeling
GO:0003366 P cell-matrix adhesion involved in ameboidal cell migration
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007157 P heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007159 P leukocyte cell-cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0007507 P heart development
GO:0008305 C integrin complex
GO:0009897 C external side of plasma membrane
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
GO:0016477 P cell migration
GO:0019960 F C-X3-C chemokine binding
GO:0034113 P heterotypic cell-cell adhesion
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0034669 C integrin alpha4-beta7 complex
GO:0043113 P receptor clustering
GO:0046872 F metal ion binding
GO:0050839 F cell adhesion molecule binding
GO:0050901 P leukocyte tethering or rolling
GO:0060324 P face development
GO:0060485 P mesenchyme development
GO:0060710 P chorio-allantoic fusion
GO:0061032 P visceral serous pericardium development
GO:0070062 C extracellular exosome
GO:0072678 P T cell migration
GO:0090074 P negative regulation of protein homodimerization activity
Transcript
Level		FPKM:0.50 TPM:0.86
ORF EntryO_BomoEE22406_complete:A_BomoEE_comp70400_c0_seq2
Sequence
(Nucleotide)
GTTCATTTACCGCTAACATCTGAACTGTACGTCGCGTCATTGTTCCAATAAAAAAATACA
ATAACTTGCGTAAATAGTTTGTTAATTATATTTAAAAAAAAATGTATAGATCAATTATCT
ATTTAAGCGTTTTACTGTGTTGTGAATTTGTATCCGGTATTGACGTATTCCACGAGGGAT
CAAAAATAACGTTTCACCCCAACGATGGAGGGTCAGGTTATTTTGGTTACAGCGTCTCTC
TGAGCTCCTACGGTCTCGTAGTTGGTGCGCCAAAAGCTGTGGCCAAAATGCCCTCCTCCG
TTTCATCAGGTTTGGTCTACAACTGTCCTCTAAAGGACACGATGGATGCTAGCAACGTTA
CTTGCAATGTAATTAGTCTGGGCAGCTCGCGATATCTGGGTTACGTGTCGTTTTTAGACG
AAATGATCAAGGATGACATGTGGTTCGGTGCAACCATAGCCCCCATGTCGAAGAACAAAC
TATTGATCTGCGCTCCTCGTTGGCTGGTCACGTACAAACGCAAGCATTACTTGGCGAACG
GAGTGTGTTTTTTACACAAAAACGAACGAGACTGGATATTGTATCCATTGAGGGACATGG
ATCGCCAGGCTTTCGTGGTAAACGGTGACAGGATTGAATACGGGGAATACGGTCTCCATG
TCAACTTCTACGCTTACGGTCAAGCGGGAATGTCGACCAAAGTGACCGAAGACAATTACG
TGATCGTGGGAGCCCCTGGACTACTGCAATGGACAGGCGGTATCGTGAGTTTCAAATACA
GCCAGGACGAGGAGAGCTCGTATATCAGCAAACAGACAACTTCGAATCCTTACTACACCC
GGGATCTTGAACCTTATAGCTATTTCGGTTACAGTGTAGAGTCTGGGATATTCGAACCAA
ACGGGAGCGTATTGTATGTAAGCGGAGGTCCGCGTGCACATATGGGCTATGGAGAGGTTT
TAGTCTTCAAACCAGTTCAAAGAGAGAAGGATCCCTTGAATATCTTGGCGAAATTGGTAG
GACCGCATCTCGGAGCTTATTTTGGAGCTAGTCTTTGCTGTACAGACATTGATGGTGACG
GCCGATCAGATCTGCTGGTTGGAGCACCAACGTATGTGAAGAAAGACGGTGGACTGCCTT
TTGATCAAGGCGCCGTATTCGTTTACATGACTCGAGAGAAAGATTCGAGCTTTGTTTTAG
AAGAAGCGGGTATGGTCCTCGGCTCTGGTGAGAGCGGAGCTCATTTTGGGATAGCTATTG
CTGATTTGGGTGATATTGATGGGGATGGCTATAAAGATATTGCCATAGGCGCACCCTGGG
AGGATGAAGGAACTGGCGCTGTCTACATTTACAAAGGACATAAGAAAGGTTTAAGAAGTA
ATCACATTCAGAGGATATCGCCAGAAGGCGCAAGAAGCTTTGGAATGTCAATATCTAAAG
GATACGACGTGGATAACAATAACTGTAGTGATCTAGCCGTGGGTGCTCATGAAAGTGCTG
AAGTTTACCTCTTCAGATGCATTCCATCCATGGACGTTCACGCTCAGATCGAAGTTCCAG
ATGCCATCAATTTACCACAGAACACAACCGAATTCACAGCGCTTGCCTGTATTGAGATAC
CCGATAAGCCTTTGTGGCGACACGTTAAATTATATATAAAATCACGAATAATCGTTGACC
CGGAACAAAACAGAGCGCAGGTATCGGGCGATTCGGAAACTATTGTAGTGGCGAGGCCCG
GAGACAAACAATGCACTGAACGGACTATTGCGGTTAAACCTACTGCCGATCTCTCAACAC
CGATATCCCTGAAACACGAATTAGTTCTAGAAGAACGCCTGAAGAAAGACTCAAGAGAAT
TTTTATATGATGCTGCGAGATTATCTGAAGAGTCAACTCTACGCGCCACATTCTTATTGC
AAATATTAAGGGACTGTGGTAACGATCTCATCTGCTTACCATGGCTGAAGATGACTCTGG
AACCGCTGACAAGGTAAGCTTTACTAGACTCGGGCTGAGGTCTCCAATGAAATTGATGAT
AACGGGTGAAAGAAAAATCTAGAAATATGCGGACGTAATGTAACATTATACGGGTAGTAA
GAATATCAACGGTTCATTAGCTGTTTGATTAAGTGACAATCAAAGTCCGATGATGTTTTA
ATATCATTATAGTCTTTCTAGTAGGCAATGATAAGATACAATTTTGTAGTCTGAATCTCC
TAAAACTGCGACTGAATTTCCAGATTATCAGTTCGTAGTAAGGTAGCGTTAGTTTATTTC
CCTGTATAATTAGACCTACTTTCTAAATAGCCTCTTAGATCATGTTGTGATTCTGTACGC
CTTGGTACAAATAACCTGCGTTACATTGGTTCTTAATTCTTTTGGGGTTCAGTTACCATC
TAACAACGGATGGGCTAAGAATCAATCTGTCCATATGTCATTTAAAAATCCACTGGTCTT
TTAGCATGACACCAATTCAATTATATCTAACTATCGTCTCGTGAACAAAATCCTTCAGAT
TCTGACCCGAAAACAGTCCATATGTTCCAGGTACAGACGACAAATTAGGATTTAAATTGA
AGATATTGAATACCGAAGAACCGGCTTACGGTGCTAAAGTCAACATTACTCTTCCGTCTG
CCCCTAAGAGAGTTCCAAGCGAATGTTCTTTAGAAGATTTAATCATGAACTGTGATGTGC
CAGCCCCTTTATTGAGGAACGAAGAAATAGTTTGGGAGGTTGAACTGGAATACACTGAGG
AAGCTGATAAGTTTATTGTTGAAGCTGAATTGGCAGATTTATTGTATAGGACCATTACTG
ATGATGCAAGCAAAGAATTGACAATCGATGTAAATCCTGTGGCTAATTTCAGTATTAGTG
GTAATCAATTACCAAATATTACCATTCATGTCTCGAGAGATAAGCTGAATGACGGCGAGA
TGATATTATTTACGCATTTTTATAAGATCACGAACTACGGGCCCTCAAATTGGCATGTTT
TGGATGCTGACATCATCATACCAGAAAAGATTGAGCTGATTGATTCGCTGAAGGGCTGCC
ACAGCATCAAATCACACGTGGAATGCGGATGGTCCGTACCAGCTATGGTATCCATGCCGG
TGATTCTGAATTTACGGTTCAACTTGTCTAAGCACGGAGATTTTCTACAATCCAACAATA
ATTTCAACGTCACCACTGCAATCGTGCTGCGCTTGAAGGATCTAAATAAATCATTCGAAA
TCACAACCACGTTGATTCTGGAGCCGGTTCCACCGATCTGGCCACAAATAGTTGGCTCGG
TGGTCGGCTTCATTGTTCTTGCTGCAATTGTGTTCGGATTATACAAAGCTGGTTTCTTCT
CGAGGAAACAAAGGGATCAACTGAAACTGCTTCAAGACGAAACACAAAGTGGCCAAGAGA
CGCTTGAACATGTCAATGACGAGATCAAACAATCAACATCAGATTTACTGGAAGACACAT
AAAGTCTAAGAATTAATGTTAGAAGCGCATTAAGATAGACCAGTAGTAGAGGGTATTGCG
GACTTAGATACGGATACTGGTAATCTGTTTCTAAAGTAAAATAGTCGTGCATCTCAGCTT
GAAGGTCCTCAAGTTATCTTTCGAAGTTTCCCCCGTAACTCCTACGACCATTTTCAACTG
GTCGGCTGTTTTGTAATTTTGTCTAGTTAGGAGCTATTGTATTGTCTATTTCAGGAGCGA
AGCTATCATTCCAGTTTAATAATTTCCAATTTAAACGGGAAAATATGTATCATTATTATT
CCGTTTTGATATTGAAATCACTAGAGCTTCGGTGTTAATAAATTCTTAACAATTAATATT
TCTCGTTAACGATATTCTGTTGGATATCTTTGATTGTTCGCAACACCGTTTCCGAAATCC
AAATTTGTAGAACCGTTAAAAAAAACAAAGATTTCTCTGAAAATTTTATCGAATGTTGTA
GCCTGAAAATTCTCGTATTAGCTGTCACGATTTCACATTGTCGAATGTTTGCAAATAATA
TGTTGAAGTGATATATTATGTAAATATAATGTTAAGTTCTCTTTCAGCAAATTTTCTTTA
TCCTCTCTCTCTTTATATTTTGCGCCAGTATTTTAGTTAACTTGAAAATAAAACGATTAG
TTTTATAGTCTTTAGTTTCCGATTAACGTAGTATCGCTCTGCTGTATCGATTCGTAATGA
TATTGTTATGCGCTGGGGTTCGGAATAAATAAAAAATTCTACCGAATTACAAGTTAATAC
TGTATTCAACACCTAGAACACTTAAAACACTTCACAATCACTTTTAATTTCTCAATTCGC
TTCTTCCGCTTCTCTTCAGGTGATCCGTTCGCTGTTT
(4357 bp)

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