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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70349_c0_seq4
Scaffold_idBomo_Scaf481
NCBI non-redundant
(nr)		PREDICTED:_pumilio_homolog_2_isoform_X1_[Bombyx_mori]
Ontology
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000900 F translation repressor activity, mRNA regulatory element binding
GO:0001709 P cell fate determination
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0007067 P mitotic cell cycle
GO:0007268 P chemical synaptic transmission
GO:0007275 P multicellular organism development
GO:0007280 P pole cell migration
GO:0007281 P germ cell development
GO:0007616 P long-term memory
GO:0008258 P head involution
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016441 P posttranscriptional gene silencing
GO:0016477 P cell migration
GO:0017148 P negative regulation of translation
GO:0031594 C neuromuscular junction
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042078 P germ-line stem cell division
GO:0045727 P positive regulation of translation
GO:0045786 P negative regulation of cell cycle
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048149 P behavioral response to ethanol
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0050804 P modulation of chemical synaptic transmission
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0061176 C type Ib terminal bouton
GO:0061177 C type Is terminal bouton
GO:0097482 C muscle cell postsynaptic specialization
Transcript
Level		FPKM:17.60 TPM:30.69
ORF EntryO_BomoEE22123_complete:A_BomoEE_comp70349_c0_seq4
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTCATTGTAATATTATTACAGAAATGCTTTATTTTAATTAATGTCTA
AATAGATGGATCCTCTTATAAACGTTTATCTAGTACAACCTACAGACGAGGCCTCCAGAG
GGACGGCTCCGTCAGCTGTCTCTCTCGACGTCTCATCCAAATTCCATCACATTATGGGAT
TCACAAATTATTTTTGTTAACATTTTTTGTACAGCCATTTACAACAATTTTATTTTCAAT
TATACCTAGACGTAAAAAATCTGAGGTGTCGCAGGAATCTACGCTTCCTATTCAATTTTA
TTACACAGGGGAATGAGGAGCAGCTACGTGTTCGACGTGCACACGGCAAGGTAGACCTCG
GAACTACATCTATCAGTACAGAACTTTACAATCATCACTATAACCTAAGCACACACTACA
ACATAAGCATCGTCCACTCGACAGAGCTGATCCCGCTCTTCGCGGGGCCCTTTACTAAAT
AACTTAATTACATAAAAATATACAAAAATATCATTTTCACAAATTATAACCGACCATCTA
TACACACCGGCACTAAAAATATTCGATAGTCTATATACGATTTTAAGCCGGTTCATAAAA
CTTAAACGAGAGCTCAGCTTGATACAAAAAAATAACGCTACGATCACGACTATAGTGTCG
ATTGTCCAGAACTGCCTGCGGCATCTCTACGTCGCTCAGAAGATTCAAGGTCCCCTAGCC
CAGCTAACAGTAAATCTACAACGAACTAACCTACGAGGCGCTCGGGCCCGTCGCCCGCCG
CTTTGCATCGAATCATAAATTACACAAGAATGAGAGACGTTCAAATATTTATACATAGAT
TCATACGAACAACGAATAATACTAGAACACTTAAAACTATAAAACGCAACGAAATATGAA
GTCGCGGAGAGACGACTCTATACAACTGTTACAAGTACTCGGATACGCACGTTCTGTACA
TCAGTCTGCCGCCGGGACGTGGCTATGTACAGGCGCCGCGGGCTCTTTACTTACAAATGT
ACAATCGCAAATATTCACAAATGTATAAAAGTGTTTGCCGCCTAAAGCACGGCGCCCGGC
GGCGGCGGGCCGATGGGGCCGAGCTCCGGCGCCTTCATGAAGAACTTCTCCAGCTTCGCG
ATGATGTGCTTGCCGTACGTGTACTTGCGCAACGAGCCGATGTGCGGTCGGATCTTGTGC
ATCAACACTTTACGCTGCGTCGGCTCCGCGACGTCGATCATCTTTTGCACGACGTAGTTC
GCGAACTGGTCCTTCATCATGACGTGGAGAGCGTTGTCGTTGAAGCCGCACAGCTCGTCG
ATGAGCAGCGCGCGCTCGTTGCGCGTGGCGTGCGTGACGCACTTCTCGACGACGTTGGAC
GCGAACTTGTGCTGCGAGAGCTGCAGCACCTTCCCGCGCACGGCGGCCACCAGGCGCGAC
CGGTCCTCGCCGGCGCCGTGCTCCAGCACGTGTTGCACCACGTAGTTCCCGTATTGATCC
GTGATTAGTTGGTCTGTGTGGGCATGCAGCTCGTTGAGCACGGGCGCGGTCTGCTCGGGC
GTGCAGTGCTCGAGGATGCGCTGTATGACGCGGCAGCCGTACGGGTGCGTGGACAGCGCG
TACACCTGACCCGCGAATGCGTTTATTATGAACTGTAACGCTGACGGCTCCACGCATTCT
ATGCACTTTTGAACAACATGGTTCCCGTTTTGGTCCTTGACACATTTAAGCACGTGTCCG
TCGAGTTCTCTGACGACCTCTTGTTGTTGTTCAGGCGGGATAGACTCGAGCGCCTTCTGT
ATGACCCGGCACCCGTACATCTGTAGCGCCAGGTTGAGCACGTGACCGCGCACCTTTTGT
GCAAGTGTGGTTTTTTGTTCGGTCGTGCCAAACTCGAAAAATTTCTGTATTACATAATTC
CCAAAGACGTCCGTCATGAGGCTGTACGCTGCCCCGATAATTTCGTTAAATACCATTTGT
TTCTCTTGGACTGTTGCTCTTTCTAGTTTCTGTTGTATAAATCTGGAGCCGTGCTGGTCC
TGCGAGAACTCTACGATGTGGTTGGCGAGGTCGCGCAGCTGCAGGTTCGGGAAGCGGTTG
TTGCGGAAGTCCTCGAGCAGACGCGAGCGCCCCGCGGCCGGCTTGTCGCCCACCAGCGCG
CCCACGCCTCCGCTCACCAGCTCTGAGATAGTTCCAACTCCACCGAGTTTGCTGAGTAGC
GATGAAGACGAACCAAACATTCCATTAGAGGTGAGTCCCTGGGCTAAACTGCTCACAGCT
CTGTACTTGGCGGTCTCGGCGCCGGGCGCGGCGGACACGGGCCGCAGCCCCACGGGCCCC
AGCGCGGCGCCCAGCGGCGGGGACAGCGGCGAGGGGCCCCACTTGCGTGCGTACTCGTGC
AGGGCGCCGCCGCCGCCGAACTCCAGCGAGTCCCGCCGCGCGCCGCTCGCGCCGCCTGTA
ACACGACATACCTCCGCGCTCCAACACTCTGCTCCTCCACTCTCCTCTACGTTCTGTACA
CGACTCGCGAACTCGGAGGCCTCGCGGGCGAGTGGCGACATCGATATGTACAAAACTTTA
CACTCTTCCACGTTTACTCATACCGGTATTACCTACTAGGTGCGTACTGATCATCAAATG
TGTTTTTAAATAGTGTCTGCCACAGTAAACATGTATATTTGTGGAAGTAATAAATTGTTC
GGATTTACTATACAGATTTGAATGTGTTATCATCATCTAAGTTCACATATTATTCGTCTT
ATTGGGTTAACAGCTTTGTGGAATAGTCGCTATCGGTAGCTGATGTTTTAGAATACTATA
AACCTACAAGGAACCAAAAAGCACAAATTCTAATTTTTTTCTTAGAATGAGAAAAATGTG
TCTAGTATGGCATGGAATTAAATTTATATTTATTGCTAACCTCCAACAAACAGACTAATA
AAACAAAAGCGATGGAGACCAAATTAAATAGATTCCATTCTTCTCTAAGCTTCACATAAT
ATTACTTTATTAAAATAAAGTTCAGTGTTTTTTGAGGGCCTAAATATTTTCAAAAATATT
ATATTTTATATAAAAACGCTATTACTTTGTGGATTGTATATTTGTATTCACATTATTCTA
TATTTTTCTTTAATGAGTAATACTGTATTCTTTCAAATATACAGACATGTTTGCCAGTGC
CAAAACCAGACGGACATACATGTTTACTAGAGTCAAACAGAAATTTTGAATAAAGTCAAT
AAAAAAACCGGTTAAGTAATTTTAAAAATAGGATTTAGATTGTAAAATATTATAAAAGAA
AAAAAAAGGCTTTATCTAGAGACCTTTTGTTACTACCACTAATGTACGCACCTTATGTTT
ACTAGCTGTACCTAATATTTTATTGATGGAGTGATTTTTTTTCTACTTAATAAAAGTAAA
GTAAATCTTCAAAATTTTTATGTACATTACTGTTACTCGTATATACATAGTACATAAACT
AATACATTTAAAAAATATTATGAGCATATGTAAATTTTTATGTTTTGCCGTCTACATTTA
CATTTGCCGCCGTCACTTGCAGTGAGAATATTATATAATAAAATGTATATGAGACACTTG
TTATTTTAAAAGAAGCATAAGATGAAAAGGTCACTACTATCAACGAGATGTAGGTATTTG
ATTTTAATGTAAACTAAATTAAATACTTGTGCATATTAGTCGAATTCATTTTTATTTTGC
AAGCAAACTATCATCACCTCTCTTCAATACTTGCAACTTTGTTAGAAGTTAAAGAAATCT
ATTTGGTAAGAGTAAAATTTAATATTTTCCTGTGTTTTCATTATTATTCCTTTTTCGAAC
TACTAAAAAACTTATACGAGGATTAAGCAAAATTTCATTCAAAATATGCTATGCATTTTA
GACACACCATGCATCTGGAATTCAGTTTGGTAACTTTATGTACAAGATGAAAAAAAAGAA
GTATCCCCTTGTGCACACTCACTTTTAATAGTCAGAAAAGATAGCGTTTATAGAAAATTT
ATGAAAAATTAGTTCTAATCGAACGTTTCAACGATCATAAATTATATTATAATATTTTTC
TATAAAAAAACGAGACGCTCGCCATTGTTTGTGTGTAAAATGTACACAACAATCGAAGGC
AGTGTAAATGTGAGTGAGCTAGTGGCGAGTGCGCATAAGTTTGCACGTGGTGTTTGTTAC
CTGGCGGCTGCGGCTGGTGCGTCTGTGCGGGGGCGGGGGGCGCGGCGCCGGCGGCGGGGT
GTGCGGGCGCCGGCTGGTACTGGCGCGGGGCGAGCACGCCGCCCGGCGACACGAGTCGCA
GAGGGGTACCGTTGCGGCCGCCCATGACCAGCGAGCCGGGGTCGTAGTAAGGAATCACGT
ACTGGCCTTGCCCGTTAACCTGCTGTTCGCCTTGCTGCGGAGTGAGCGGCCGTCGCGGTT
GCTGAGCTTGCTGTTGCGCGGGTTGCGCTACGAGGCCGGGATATACTCCCCATGGCGCTG
CGACTCCGTAATAAGGCGGAACTCCCGCGATTAACGCGCTCACGTACGGCGCACCTTCCT
GTCCTGTGTTGATTACGTACGGGGCTTGCGTGAACGCTTGTTGGGCGGCTATTTGCTGTT
GCAGTTGGAACTGTTGCTGTTGTTGTTGCTGCAGCAGTTGTAACTGTGCCGCTGCCGCTT
GTCCGCCCGCTGCTGCCGCTTGTTGTGACCGAATTAGTTGCTGCACGTCGAAGGGCGTGT
GATGCGCGGAGTCGGGCGCCGAGGGCGCGCCGTTGACGAGTCCCCCGCCTGCGCTCTCTG
CGCCCACCCCACTCACCGCGCTCACCGCTCCCACCGCGCCGCCGTACTGTTGCGAGCTCG
CAAAGCTGCTGTTGTCGAATTGAGGATGTTGTTCCATTTGTAAAACAAGTTCGATGTGTT
GGTTCATAGAGTCGTTTAGTGTCATTCCTGGGTGAATCTGTGCGTGTTGCGGATGCGGTA
GGCCCTGTAGTGGAGCCACGCCTAACATCCCCGGGTGTGGCTGTGGGTGCGAGAGATGCG
GCAGATGGTGCATGGGCTGCGGCTGCGGCAGCGCGTGGTGCGGGTGCAGCGGGAACACGG
GCGGCTCGCCGTTGCGCGCGCCCCCCGCCCCCTCCTCCTCCGCGGGCGACGGTTGGCGCG
ACCCGGGCGTGCGGTTAAAAGCTTTATCGTCCTCTTGTCCGTTGTGTATCCCGTTGGGCA
GGGAGCCGTGCTCGTGTAGCTCGTGCAGGTCCTTGTCGAAGGGCGAAGTCGCTTTATCTT
CGGCGCGCTCCTCCAGCACCATGCCGCGCAGGCCCGCCACCACGCCGGCCACCTTCTCTC
CACCGCCTCCTGTAGGTGATCCTCCCAAGACATATTCGACCATTTTTACACCAAGTCCAG
CTGTGTCACGAGGAGAGAGAATGCTGCCGGCGTCTCCACCGGGAAAAGTAACCCCACGAC
GGTTTCCCATCATTGCCACGCTGACATTGTGTTCGACAGCTTGAGCAGACCAAGTAGGAT
CACGCCACATTTGGTCGGGGTTCAATTGCAGTGGAGGCAGGTGCGGAGGGCCTTTGGTAT
CGCCACCGGCGCCTGGCCCCTTGTCCCATAGCTTTTTTGCAGCAGGTGCAATCTGATTCC
TTATTGTAGCAACAGGTGTAAGCCCAAGTTGACTTTGTCCTTGTTGCAAAAACTGGTTAG
TTCCGGGAGCTAACATTCCTGCCTGACTTAAATACATGAGATGCTCTCCTGTTTTACCAA
TGCCATTCATGGCTTGCATTGGGTTAGCATGATGTTGATGAATATCATAAAGACCTTGTT
GACCTAATTGTGCTGGGTTTTGAATGCTTTGAAGTGCAGGTATCATCATTGCACTGTTTT
GAATTGTCAAACTGCTACCCAATGTATGGTTTTGCATTGGTGCCAGTTGTGTGTGAACCA
TGTTGGTTGTTAGATGTGCAGGGTGACTGCCAATAACAGAGGGGTTCATAGCCAACGTTG
AAACCGAAGAAGCAATTGCTTGATTAATGTATTGTTGTTGATTTGTTTGGGAATTTTTAA
GCTGTATAGCTGGTCCTTGTTGATGTATATTATTCATTGTTATAGGTGTGGTATTTTTCC
ATTTATCTTGATTCTCAGCAATAGTATCTTCTCCAACAGCCCACCTTTGCTTATGAGCTA
GGGAAGCGAGTTCTCCTTCTTGTTGTTCACGTTGGAATACGTAATGCACTGAGGCATCGT
CCTGACTGCGAGTTTGTGAAGGGCGCACGTTTTGCAACCCTGCTTCTCCCGCCTCTTCTT
CTACTCCGGTACCTGGCCACTTCATTGGGCTACCGTGAGGTTCGAGCATTCAGCTTTACG
ACGATTTAATCTTTCCTACTCGTAAATGTATTCCGCTTTCCTGTTTACGGAATATATGAC
GCTCCCTTTGATTTTGAACAAAAACAAAATAGTCTTCTGTTGTCAATAGTTTACATTATC
TAGCTGACTAATTTTATTGCTAGTATTACAAAAACTTTGCCATTCAGTGACTTTTAAACC
TATGTTTCTTTGTATTGACAGTAGTTTATCAAGCACGATGACAGCCGCTGGAGAAACCAA
AATATTGCACTCGGTGACTCGGTACAACGGTTTGCTTGAAAAGTTTAAACAAAGGACAAT
TTGAAACTTCCTGTTTATACGATATTATATTAGTACAACTCCAAAATTTACTAATTATAG
ACTATTTTGTAGTATTAACTATAAACAGAAGTATTTGTCGGTGTCGAATACTGAACTGAA
TAAACACTGAAAAATTTACACTATTCACACAATTTCTAAACAAAACGACCACAAATATAA
TTACTATATGTACACAGAACTATTTACAATGTACAATTTTACAAAAAACCCGGTTTATGC
CATTGGCTGTTGTCGATACTTTCTGATTTAGAAAAGGCGATTATCATTCTTCACTGTCTG
TCCGCCATAATCGGTTGGTCGGGCAGATGCAGTGCGCGCGCAACGCGCAAAGTTAAACTA
TCCCGG
(7026 bp)

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