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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70340_c0_seq2
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101739573_isoform_X3_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001106 F transcription corepressor activity
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0042393 F histone binding
GO:0043197 C dendritic spine
GO:0043198 C dendritic shaft
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051491 P positive regulation of filopodium assembly
GO:0060999 P positive regulation of dendritic spine development
GO:0070491 F DNA-binding transcription factor binding
GO:0098815 P modulation of excitatory postsynaptic potential
GO:1902897 P regulation of postsynaptic density protein 95 clustering
GO:1902952 P positive regulation of dendritic spine maintenance
Transcript
Level		FPKM:2.32 TPM:4.04
ORF EntryO_BomoEE22073_complete:A_BomoEE_comp70340_c0_seq2
Sequence
(Nucleotide)
GAAGGAGTGAGATAGCATATACCTTTTGAATGTTGTTTGATAGCATCGCACGCCATCTAG
GGTCGTTTGGCGTCACTCTCGTCGTGCGATGCGATGGCGATGTGTGTGATTTTTTCGGTT
CGTTATTGTTATGTTTTGTGATAATAACAGAAGATTATTGAAATAGACAACCTATAAAGT
ACATGTAAAACCTAGAACTTCACAGCTGCTAATTAAATTTCTGTTCCTCTGTGAGATAAT
TCAACCTTAAAGCCATGGAAGACAATTCTGAAACCCACATGGAGACTGATGTTACTTCGA
CCACTGAGGATGTACCTGAGACGCAGGAGGTGACTGGATCAAATGGCAGTGTTGAAATGG
TTATTGTAGTGGAGAAAATGGAAGAAGAGGAGGACAACAACAAAACAGACAAGGCCCTAT
TAGATTCCGAAATAATATCAACAGGTCCAACAGAGCTATCCTCCGATGAGAGATCCTCGC
CAGCTAAAGATCTTGATCAACCAAAGACGGTTATCGTTTCACCAACTAAAGATATTGAAC
AGCCATGTAGTTCATCTTATGTCAATGCAACCGTTCCAATTTCACCTTGTAACATACCTT
CGCCGATTAAGCCAACCACAGAAGATGTAACTTCAGACTTATTGCAGACTGAAGTAGTTG
ATTCTTCAAGTAAAATGGAAATTACTAATCCTGTCACTGAGAATATTACAAATCCAGAAA
TAAATCCACCAAAAATGGTTCAAGATATTGATGAACCTGAAGACAAATCTCTTAAAGATA
TTCAATCAACGGCAACACCTATTATAACACCAGAAGAAATTCCATTGCATGAAAGCTCTA
ATGACAATGTTGTTATGACAATCCAGTTGTCAGAAAAAGCCGAGTCAAAAACACCTACTC
CTGCTGCAATGCCAATAGATGTCATAGTCGAGAGAGAAGATCAAAATGTCTCTCAAGTTG
AAATACCAGAAGTGCAAGAAAAAGATCACAATAAAAGCATCAGTAGAGAGCTTAAGTCTC
TTATAAAATCTGCAAAGGAGTCAAAGATAATAAGTGAATGTACTCAATTAAAAACCAAGA
CCAGGAAATCTAGAGTTATTCTAGATAGTTCTAATGCTAGTCTCAATGCTTCCATTGAAG
CTGAAAAAATACATGGAGCCAGAAGACACAGTAATAACTCACAGAAGAGCAATTGTAGTG
AGAAATCTGATAAACCTGTCACGAAAAGATCTATGCGGTCACAGAACCCTGAATTTGTGA
ATAAAGTGAAACAATTCTTAAATTCTGTCACTGGGAAAATGCAAAAAGAGGATGATATGA
CCGATGATGAACTCGAGGAGAATAAACCAGGTGAAAAGGTTGAAGGGATGAGGTCTCAGT
CTGGCACTCCTAAAAAGAAAAAACCTGAAACACTTCAGGTCCCGGGAAAACTTCAGTCAG
ATTTGTATTGCTGGCGTTGTCATTGGCAAGTTGAACAGGCTGAACACGAGAAGACCCATG
CTCCAATGCATTGTAATGTCTGCCCTCGATCATTCCACTATAGATGTTTGTCAAGTGCAG
AGCGTAATAAAATTACAGAAGATAAAAGCTGGGTGTGCCCTGATTGCTTAATAATACTGA
ATGCAGAAAGCTCTGAAACTAGATCACCGGCAATGAAAAAGATATCATTGGGAATGCTTT
GTGAGCTACTAAAGTTTGCATTGGAGAGGATGATGGATCTGAATGGGGTGGAGCCATTCA
TGACCCCGGTTGATCGCGAAGCGTTTCCCGACTATGAGAAATACGTGGTGCACCCCATGG
ACCTATCCCGCATGAAGTCGAACATCGCCAACGGCCTCTACGGAAGCACCGAAGCTTTTT
ACGCTGACGCCCAATGGATACTCCACAATAGTATTATATTCAACACACTTCAGTCGAAGT
TGACCGGCGCCGCGAGGGCGGTGGTGCGCTCGTGTCGTGCGGAGATGGGCGAGATCGAGG
CGTGTCCCGAGTGCTACGCGGCCGCGCATGCGCGCAAACCCACCTGGTTCACAGACGTGT
GCTCCACTCCGCACATACTCTTGTGGGCTAAACTTAAAGGGTTTCCATATTGGCCAGCGA
AAGGCATGTCGGTGAGTCCGGCCGGTCTGGTCGACGTGCGTTTCTTCGGCGCCCACGATC
GAGCCTGGGTGCCGGCCAAAGACTGCTTCCTGTACTCGGAGAAGGATCCAAACAACTTTA
GAACTAAGCGACAGGATATATTGGACAGCATGCAGGAAGCCGAAGAACACATTCGTAACA
TATCGAGGAAGTATGGAAAATTCGTCTACCCCCCGTTCAGAACGCAATTCGATCCTGCGA
AATTAAACGAGCAAATGAGAGTGATGATACCATCGTTCGAGGGTGAGATACGTGTTACGG
TCAAGGATAAATCGCCGAATACAACAAAAGACAAGAGCAGGACCAATTCTAAATGCTCTA
AGAACTCTACAAATGGCAGTCAAAAGTTAATGGAAGTTGACGAATCTGCGGTGAAAGACA
CAAAAGAGACTGAAAACTCGCGGAAAAGACGGCGCTCCTGTGTTACAGACACACCGGTGC
AAGACAACACAGCCAACGAGAAAAAAAAGCGAGTCGATGATGAAAAATCTGATAAAAAGA
TAGACACAAAAGATATGAGCAATAAAGAATTACCAAAGATCAAAAAGAAAGAACCAGAGA
ACGTTATTATTCCAATAGACGATGATGATTCAGTTATCTCGATCGATGAGTCAAACGATT
CAGTCAAAGGTAAAGAGAAAATAGTTGAGAAAAACCGAACCGTCACTCCAATAAAAATAA
TATTACCTAAACATAACCGACACACTCCGAAATCTAGCGGCACCAGAGAATCTCCCAGAA
CTAGCACCCCCAACGATAAATCTCTTCTGGTGACGCCAAAAGATGAAAGATCCGCATCAA
AACAAAAAAATAAACCAGGCAGGAGCTCCACAGAGAGACAAAGCAGGGAAAGCAAGAGTA
GACATGAAAAGAGAAGGAATTCCAAAAGTAACAAATCCCTGAACGGTAGCATAAGTTCTA
AAAATGAAAAAAATGACAGGATGAAAACCGATAAAAACAACGAAAACCCAAACGCTGCCA
ACAAAGAGAAACCCGCAAGTAAAATATCAGTTATCAAAGTTAAAGATAGCGAAGCGATAA
AATTAGCAGAGAAGACTCCGCCCGCAGAGGCTGTGAAGTCGGTTAAAGATCGAACGGCCG
AGGATGACGACACTAGTTTGGCGGCCATCGCCCGCGACACGGCCCGGAATGCCGACTCAG
TCATAATGAGCAACCCGCCCGGCATGCCCACAATCAGCAGCGTCAGGTCCTTGTCCACAC
TGGCCCAGGGCACCTCAACGACGACCACAAAAACGAACACGGCATCCGCGTCGGTGGACA
TAACCGCGGACAGTGCGCCGGACTCGAGCGCGCTCAGCAATACCGACTCGGCCAAGTCGC
AGAAAGCGAGGAACGAGAACGAGCCCATGGTGGGGAGGGTGGGGGTGCGGGCGTTCGCCA
GGATGACGTCACCGGAACGCAACAAAACTAACAATGTGCAAGTAGAGATCAAGACTGAAC
CGATCGATCTAGACGACCCGAGCAGGCACATGGAGAAGATGGATCTGATGAACGCATTCA
AACTCCGACCCGTGAATCAAAGTTCCAGCCTACGTGAGGTGCGCTTTAATAAGGTCGTTG
TGACGCCTCTAACGCGAAGAGCGCCGACAGGGGCGGCCGAAATACGTCCGCGTGCGAAGA
AGACTTTCCCACAGCCCAAGAAACCCGAAGACTGCCAGCTCAACGGGAAGAACTCCATGG
TGTACATACCCATACAGCCGGCCATCACCCAGGCGCCGGCCCGACTGGCGCGCCCCGCCC
CCGCGTCCCTCGCCGGCCAGCCGCGCTGTGTCGCACCCATCATAGTCAGCAGCTCAGGAA
ACAATGGTGTAAATACAGTGACAACACAGATGTTGCCGCCTACGCTGACGTCGGCCAGCA
CCGCGGTCACAACCCCAGTACAGTTGGCGCCCACAGTTGGGCAAGTGCCGACCACCGTCC
ACACGGTGCCCCTCATGACTTCCGTCAATGGACAGTGGATGTTTAGTTTACAACCTGTGA
TGTCCGTCGGAGCTATCGATTCGAACACATCGCCGCTAGTGAACGGTGTTCCGGAAAGGC
TCGGTCAAGCGGCGACCGTGGTGCCGGCCGCCGTCGTGTCACCCGCCCCTGCGACCCCCG
CCTGCCCCGCGCCCCTTGCCGCTGCACCGCCGAGCCGGCCCGGAGACTCTGTCGTCACAA
ACACTCCCACAGAACTCCCGAGGTTACAGCAGCGGCCGCCGATACAAAATCCACTAGATC
CCAACTTCCCAATTGGTATTGTACCAGCACCATCTACCGTCGGTCCTCTAACGGCTAAAC
TCAATCAGAATGCCATCAAGCTAGCCGATTTCTTCCGCACGCTACTGGAGGATTCGCTGG
ATAATCTCGACGATCCATCGACGCAGGTCACGTCCCTGAAGCTGCAGCTCGAACAGACCA
AGTGGAGGCACCAGCAGAGATTGGACGAAATCAAACATAACTTTGAATTATCGGTGGCGG
AAATGCGGGCAACGTTCGAGAAAGAGAAACAGCGGCTCGTCATGGAGACCAGGCGTCTGG
CGCAAATCGAATTGGAGACAGCTGTCAAACTAGCTAAATCCAAACAGTGGTGTGCGAACT
GCAGCCAAGAAGCTCAGTTTTATTGTTGCTGGAACACTTCCTACTGCGACTACCCGTGCC
AGCGCGCGCACTGGTCGCAACACTACTCCGTGTGCACGCAGCAACGATCGGAAGGCAACA
ATAATAATAACAGCGACGGAACTAGCGCTCCGGAAAGTAGATCGCAGACAGATAAGTTGC
CAGCGTTGCAGAAGAGCACCGTGGTGCCGACCCTCACGGTCGGCGGGAAACTTGCCTCCA
GATCAGCCAGCCAGGATAGTACGCCAATGTCTTCCATCATCATGAGCATGGTCGAGGACG
TCAGCGGGAACCAAACGGTGAAATGTGTGGGGACGTACAATGGGAGCAAAGCCGGCGCCG
TGCCCGCGCAGATACCACCTCTCATAATCAACAAGCAGATAATGAACGAGGAGAACAAAA
AAGTAGTAACGTCGGGAGGCTACCTCATCGTGGGCTCCACGTCCAACGCCAGCGTCAACC
CGCCGCGACGTACTCACACGCTGCAGTACTTCACTTAGCGCCAACCGAACTTGGAAATAA
TCCCGCGGACTGTCCAACAGAAGTAAGGTTAAAATTTTAATGGACATTTTAGCGGAATTG
TAACCCAGTGGGGTCGAAAATGTGAAAATGTTGGACGTAGTTCAACAGAAATAGCCCGCA
CTGAGCCACAGTAAAGCTGTTCAAAAAACAATACATACTGTACTAGCACTACATTATATG
GTTATAGTTTTAGGATGTCGTTACTTCTCTTAATGAATAAATAGTCTTGTTTTATGTAAC
GTCATCTGGTCACCAGATACACGTATTGACATTATTGTAGATATTTCAATACTTTCTGAT
AAGTTGCATTAAATTAAGCTTTGTTGAGTGGTACTACATATTTGAGTAAATTGTTTTTAT
TATAGTTTCTACTTCAACGATTTTAAGCCATATATATACATGTTTGGTTATAAATTTCTG
TTTGTGAAGCATTCAAATTAAAATTAAGTGATATTTGCAATTTATGATGCAACTATAATT
AAATATAACTATAACATTAAATGTTTTACTTGAAATTAAAGCTATGTTTTTAATGTGAAC
ATTATACATGTATTCTGCATATACTGTTATATAAATTAACAACAAACCATCTGTAATAAT
ATTAGATAGTGTGTAAGCTATCAGAAAAAAAAAAATTGTTACTTGTTTGAATTGGAAATT
GGAATCGTTTTTGAACAAAATATAATAATTGTGTAAATAAATATTAAATGCAATAAAAAT
TTGAGAAATTAGCATTCATCCATCTTTTTTATTTATATGTGGATGAATGGTTTTATAATC
TGTCCTTTTCTTTTTTTGTTATTATTATATCATTATAATAATTTTCAAACACTTAGGAAA
ATAAAATCCAATATTTCTGTTCTGCGAAAGATGTATGTTGTATTTTTCATTAGGCACAGT
ATACTACTATAGGTAGTTTGTCTCGAAATATTGTTTATTCTAGTATTCCATTAGAAGGAC
TATCTGTTTATATTTAAAAAAGGAGTATGTATATATTAGTGCATGCGTTTCAGTAGAGTA
CATAATGTTAGACAAATATTTACGTTATGTACACGACGTATATAATTAAATTAAGTCCCA
TACGCCCATTGTGCATTTATTTTATGATAGTTATGATTTTATTTGATCATCAGCTGTTTT
ATTGTCACTAGGTGCGTAGGAAGTTTTTTAGTGTGCTCTGTGAAAAGAATAGAAAAAAAG
CAATATTTATGCTAAATGCTAATAATATTAGTATATAGGAAGATCTGTTAAAATAAAACA
TATTAGAAATTAAGTTTTCGGATTTTATGATATATCAAAATAGAGATGCAGCTGAATGAA
AGTGTAAAAATTTGTGCTCAAATAAACTTGTCTGTCCAGTACAAATCATACTACTTTTAT
GTTTGCGGATTAGAACGTGCGGTTCACTATTTACATAATATTTAAGACTGCTATATAAGG
TTTGCTGCAAATAAAGCATTTTAGGATAATGTGATTTTCGGAAAACACGTTCAATGTGTT
TTCGTTATTATCGTATGTAAGTTTCATTAAGTGTAACTGTAAAGCGGAATTATATTTTAA
TTTTCTTTTTAATAATGATAGTGAATTAAAATATTTTGTTTAAATATTATGCAATTCCTA
GTCCTAGTCAATGCGTATAGAATATTGAAGATCAATCAAATTTATTATATGCGTACATAG
GTCACACATAAACATACTAAAAGCACATTAGAAAACATACAATATTGATTAAAGTTTTAA
AAATCCAATAGTGACATTGAATTATAAAAAGGAATGTTAAGCGTTTGCATTGAATTTTGA
CAAATATATGCTATGAGATTCATAGTGAGCTTCAAGTAATTTTTCAATGTTGACAGGACC
ATTGAAATTTTGGATTGCGTTGAAAGGGCCGGATTTACAGACCCATGATATATTTTAATG
TAGAAATTTGCTTGTCTCCATTTTAGATTTTAATCATAGTGTAACAGTAAAACGTTCATT
ACTTTTACTACATTGTACGACTTGAAAGATTAGGCATTATAATGTAATTGTAAATAGTAT
ACTGTAGTTATTAAATAAAAACTTGAAACATATCTGCTTGTTTATGTTCAATAACCCTTT
GTTAATGTCCTTGGAGAATATGTGTTATTAATAACACATAT
(7421 bp)

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