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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70340_c0_seq1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101739573_isoform_X3_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001106 F transcription corepressor activity
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0042393 F histone binding
GO:0043197 C dendritic spine
GO:0043198 C dendritic shaft
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051491 P positive regulation of filopodium assembly
GO:0060999 P positive regulation of dendritic spine development
GO:0070491 F DNA-binding transcription factor binding
GO:0098815 P modulation of excitatory postsynaptic potential
GO:1902897 P regulation of postsynaptic density protein 95 clustering
GO:1902952 P positive regulation of dendritic spine maintenance
Transcript
Level		FPKM:7.78 TPM:13.57
ORF EntryO_BomoEE22067_complete:A_BomoEE_comp70340_c0_seq1
Sequence
(Nucleotide)
GAAGGAGTGAGATAGCATATACCTTTTGAATGTTGTTTGATAGCATCGCACGCCATCTAG
GGTCGTTTGGCGTCACTCTCGTCGTGCGATGCGATGGCGATGTGTGTGATTTTTTCGGTT
CGTTATTGTTATGTTTTGTGATAATAACAGAAGATTATTGAAATAGACAACCTATAAAGT
ACATGTAAAACCTAGAACTTCACAGCTGCTAATTAAATTTCTGTTCCTCTGTGAGATAAT
TCAACCTTAAAGCCATGGAAGACAATTCTGAAACCCACATGGAGACTGATGTTACTTCGA
CCACTGAGGATGTACCTGAGACGCAGGAGGTGACTGGATCAAATGGCAGTGTTGAAATGG
TTATTGTAGTGGAGAAAATGGAAGAAGAGGAGGACAACAACAAAACAGACAAGGCCCTAT
TAGATTCCGAAATAATATCAACAGGTCCAACAGAGCTATCCTCCGATGAGAGATCCTCGC
CAGCTAAAGATCTTGATCAACCAAAGACGGTTATCGTTTCACCAACTAAAGATATTGAAC
AGCCATGTAGTTCATCTTATGTCAATGCAACCGTTCCAATTTCACCTTGTAACATACCTT
CGCCGATTAAGCCAACCACAGAAGATGTAACTTCAGACTTATTGCAGACTGAAGTAGTTG
ATTCTTCAAGTAAAATGGAAATTACTAATCCTGTCACTGAGAATATTACAAATCCAGAAA
TAAATCCACCAAAAATGGTTCAAGATATTGATGAACCTGAAGACAAATCTCTTAAAGATA
TTCAATCAACGGCAACACCTATTATAACACCAGAAGAAATTCCATTGCATGAAAGCTCTA
ATGACAATGTTGTTATGACAATCCAGTTGTCAGAAAAAGCCGAGTCAAAAACACCTACTC
CTGCTGCAATGCCAATAGATGTCATAGTCGAGAGAGAAGATCAAAATGTCTCTCAAGTTG
AAATACCAGAAGTGCAAGAAAAAGATCACAATAAAAGCATCAGTAGAGAGCTTAAGTCTC
TTATAAAATCTGCAAAGGAGTCAAAGATAATAAGTGAATGTACTCAATTAAAAACCAAGA
CCAGGAAATCTAGAGTTATTCTAGATAGTTCTAATGCTAGTCTCAATGCTTCCATTGAAG
CTGAAAAAATACATGGAGCCAGAAGACACAGTAATAACTCACAGAAGAGCAATTGTAGTG
AGAAATCTGATAAACCTGTCACGAAAAGATCTATGCGGTCACAGAACCCTGAATTTGTGA
ATAAAGTGAAACAATTCTTAAATTCTGTCACTGGGAAAATGCAAAAAGAGGATGATATGA
CCGATGATGAACTCGAGGAGAATAAACCAGGTGAAAAGGTTGAAGGGATGAGGTCTCAGT
CTGGCACTCCTAAAAAGAAAAAACCTGAAACACTTCAGGTCCCGGGAAAACTTCAGTCAG
ATTTGTATTGCTGGCGTTGTCATTGGCAAGTTGAACAGGCTGAACACGAGAAGACCCATG
CTCCAATGCATTGTAATGTCTGCCCTCGATCATTCCACTATAGATGTTTGTCAAGTGCAG
AGCGTAATAAAATTACAGAAGATAAAAGCTGGGTGTGCCCTGATTGCTTAATAATACTGA
ATGCAGAAAGCTCTGAAACTAGATCACCGGCAATGAAAAAGATATCATTGGGAATGCTTT
GTGAGCTACTAAAGTTTGCATTGGAGAGGATGATGGATCTGAATGGGGTGGAGCCATTCA
TGACCCCGGTTGATCGCGAAGCGTTTCCCGACTATGAGAAATACGTGGTGCACCCCATGG
ACCTATCCCGCATGAAGTCGAACATCGCCAACGGCCTCTACGGAAGCACCGAAGCTTTTT
ACGCTGACGCCCAATGGATACTCCACAATAGTATTATATTCAACACACTTCAGTCGAAGT
TGACCGGCGCCGCGAGGGCGGTGGTGCGCTCGTGTCGTGCGGAGATGGGCGAGATCGAGG
CGTGTCCCGAGTGCTACGCGGCCGCGCATGCGCGCAAACCCACCTGGTTCACAGACGTGT
GCTCCACTCCGCACATACTCTTGTGGGCTAAACTTAAAGGGTTTCCATATTGGCCAGCGA
AAGGCATGTCGGTGAGTCCGGCCGGTCTGGTCGACGTGCGTTTCTTCGGCGCCCACGATC
GAGCCTGGGTGCCGGCCAAAGACTGCTTCCTGTACTCGGAGAAGGATCCAAACAACTTTA
GAACTAAGCGACAGGATATATTGGACAGCATGCAGGAAGCCGAAGAACACATTCGTAACA
TATCGAGGAAGTATGGAAAATTCGTCTACCCCCCGTTCAGAACGCAATTCGATCCTGCGA
AATTAAACGAGCAAATGAGAGTGATGATACCATCGTTCGAGGGTGAGATACGTGTTACGG
TCAAGGATAAATCGCCGAATACAACAAAAGACAAGAGCAGGACCAATTCTAAATGCTCTA
AGAACTCTACAAATGGCAGTGATATAAGCGAAGCAGAAGATCTACTGGGGCAGCCTTGTA
ATAAAATTAATGATAATATTAATGATTCAAAGGACGAGGTGATGGAGCAGAATCAAAAGT
TAATGGAAGTTGACGAATCTGCGGTGAAAGACACAAAAGAGACTGAAAACTCGCGGAAAA
GACGGCGCTCCTGTGTTACAGACACACCGGTGCAAGACAACACAGCCAACGAGAAAAAAA
AGCGAGTCGATGATGAAAAATCTGATAAAAAGATAGACACAAAAGATATGAGCAATAAAG
AATTACCAAAGATCAAAAAGAAAGAACCAGAGAACGTTATTATTCCAATAGACGATGATG
ATTCAGTTATCTCGATCGATGAGTCAAACGATTCAGTCAAAGGTAAAGAGAAAATAGTTG
AGAAAAACCGAACCGTCACTCCAATAAAAATAATATTACCTAAACATAACCGACACACTC
CGAAATCTAGCGGCACCAGAGAATCTCCCAGAACTAGCACCCCCAACGATAAATCTCTTC
TGGTGACGCCAAAAGATGAAAGATCCGCATCAAAACAAAAAAATAAACCAGGCAGGAGCT
CCACAGAGAGACAAAGCAGGGAAAGCAAGAGTAGACATGAAAAGAGAAGGAATTCCAAAA
GTAACAAATCCCTGAACGGTAGCATAAGTTCTAAAAATGAAAAAAATGACAGGATGAAAA
CCGATAAAAACAACGAAAACCCAAACGCTGCCAACAAAGAGAAACCCGCAAGTAAAATAT
CAGTTATCAAAGTTAAAGATAGCGAAGCGATAAAATTAGCAGAGAAGACTCCGCCCGCAG
AGGCTGTGAAGTCGGTTAAAGATCGAACGGCCGAGGATGACGACACTAGTTTGGCGGCCA
TCGCCCGCGACACGGCCCGGAATGCCGACTCAGTCATAATGAGCAACCCGCCCGGCATGC
CCACAATCAGCAGCGTCAGGTCCTTGTCCACACTGGCCCAGGGCACCTCAACGACGACCA
CAAAAACGAACACGGCATCCGCGTCGGTGGACATAACCGCGGACAGTGCGCCGGACTCGA
GCGCGCTCAGCAATACCGACTCGGCCAAGTCGCAGAAAGCGAGGAACGAGAACGAGCCCA
TGGTGGGGAGGGTGGGGGTGCGGGCGTTCGCCAGGATGACGTCACCGGAACGCAACAAAA
CTAACAATGTGCAAGTAGAGATCAAGACTGAACCGATCGATCTAGACGACCCGAGCAGGC
ACATGGAGAAGATGGATCTGATGAACGCATTCAAACTCCGACCCGTGAATCAAAGTTCCA
GCCTACGTGAGGTGCGCTTTAATAAGGTCGTTGTGACGCCTCTAACGCGAAGAGCGCCGA
CAGGGGCGGCCGAAATACGTCCGCGTGCGAAGAAGACTTTCCCACAGCCCAAGAAACCCG
AAGACTGCCAGCTCAACGGGAAGAACTCCATGGTGTACATACCCATACAGCCGGCCATCA
CCCAGGCGCCGGCCCGACTGGCGCGCCCCGCCCCCGCGTCCCTCGCCGGCCAGCCGCGCT
GTGTCGCACCCATCATAGTCAGCAGCTCAGGAAACAATGGTGTAAATACAGTGACAACAC
AGATGTTGCCGCCTACGCTGACGTCGGCCAGCACCGCGGTCACAACCCCAGTACAGTTGG
CGCCCACAGTTGGGCAAGTGCCGACCACCGTCCACACGGTGCCCCTCATGACTTCCGTCA
ATGGACAGTGGATGTTTAGTTTACAACCTGTGATGTCCGTCGGAGCTATCGATTCGAACA
CATCGCCGCTAGTGAACGGTGTTCCGGAAAGGCTCGGTCAAGCGGCGACCGTGGTGCCGG
CCGCCGTCGTGTCACCCGCCCCTGCGACCCCCGCCTGCCCCGCGCCCCTTGCCGCTGCAC
CGCCGAGCCGGCCCGGAGACTCTGTCGTCACAAACACTCCCACAGAACTCCCGAGGTTAC
AGCAGCGGCCGCCGATACAAAATCCACTAGATCCCAACTTCCCAATTGGTATTGTACCAG
CACCATCTACCGTCGGTCCTCTAACGGCTAAACTCAATCAGAATGCCATCAAGCTAGCCG
ATTTCTTCCGCACGCTACTGGAGGATTCGCTGGATAATCTCGACGATCCATCGACGCAGG
TCACGTCCCTGAAGCTGCAGCTCGAACAGACCAAGTGGAGGCACCAGCAGAGATTGGACG
AAATCAAACATAACTTTGAATTATCGGTGGCGGAAATGCGGGCAACGTTCGAGAAAGAGA
AACAGCGGCTCGTCATGGAGACCAGGCGTCTGGCGCAAATCGAATTGGAGACAGCTGTCA
AACTAGCTAAATCCAAACAGTGGTGTGCGAACTGCAGCCAAGAAGCTCAGTTTTATTGTT
GCTGGAACACTTCCTACTGCGACTACCCGTGCCAGCGCGCGCACTGGTCGCAACACTACT
CCGTGTGCACGCAGCAACGATCGGAAGGCAACAATAATAATAACAGCGACGGAACTAGCG
CTCCGGAAAGTAGATCGCAGACAGATAAGTTGCCAGCGTTGCAGAAGAGCACCGTGGTGC
CGACCCTCACGGTCGGCGGGAAACTTGCCTCCAGATCAGCCAGCCAGGATAGTACGCCAA
TGTCTTCCATCATCATGAGCATGGTCGAGGACGTCAGCGGGAACCAAACGGTGAAATGTG
TGGGGACGTACAATGGGAGCAAAGCCGGCGCCGTGCCCGCGCAGATACCACCTCTCATAA
TCAACAAGCAGATAATGAACGAGGAGAACAAAAAAGTAGTAACGTCGGGAGGCTACCTCA
TCGTGGGCTCCACGTCCAACGCCAGCGTCAACCCGCCGCGACGTACTCACACGCTGCAGT
ACTTCACTTAGCGCCAACCGAACTTGGAAATAATCCCGCGGACTGTCCAACAGAAGTAAG
GTTAAAATTTTAATGGACATTTTAGCGGAATTGTAACCCAGTGGGGTCGAAAATGTGAAA
ATGTTGGACGTAGTTCAACAGAAATAGCCCGCACTGAGCCACAGTAAAGCTGTTCAAAAA
ACAATACATACTGTACTAGCACTACATTATATGGTTATAGTTTTAGGATGTCGTTACTTC
TCTTAATGAATAAATAGTCTTGTTTTATGTAACGTCATCTGGTCACCAGATACACGTATT
GACATTATTGTAGATATTTCAATACTTTCTGATAAGTTGCATTAAATTAAGCTTTGTTGA
GTGGTACTACATATTTGAGTAAATTGTTTTTATTATAGTTTCTACTTCAACGATTTTAAG
CCATATATATACATGTTTGGTTATAAATTTCTGTTTGTGAAGCATTCAAATTAAAATTAA
GTGATATTTGCAATTTATGATGCAACTATAATTAAATATAACTATAACATTAAATGTTTT
ACTTGAAATTAAAGCTATGTTTTTAATGTGAACATTATACATGTATTCTGCATATACTGT
TATATAAATTAACAACAAACCATCTGTAATAATATTAGATAGTGTGTAAGCTATCAGAAA
AAAAAAAATTGTTACTTGTTTGAATTGGAAATTGGAATCGTTTTTGAACAAAATATAATA
ATTGTGTAAATAAATATTAAATGCAATAAAAATTTGAGAAATTAGCATTCATCCATCTTT
TTTATTTATATGTGGATGAATGGTTTTATAATCTGTCCTTTTCTTTTTTTGTTATTATTA
TATCATTATAATAATTTTCAAACACTTAGGAAAATAAAATCCAATATTTCTGTTCTGCGA
AAGATGTATGTTGTATTTTTCATTAGGCACAGTATACTACTATAGGTAGTTTGTCTCGAA
ATATTGTTTATTCTAGTATTCCATTAGAAGGACTATCTGTTTATATTTAAAAAAGGAGTA
TGTATATATTAGTGCATGCGTTTCAGTAGAGTACATAATGTTAGACAAATATTTACGTTA
TGTACACGACGTATATAATTAAATTAAGTCCCATACGCCCATTGTGCATTTATTTTATGA
TAGTTATGATTTTATTTGATCATCAGCTGTTTTATTGTCACTAGGTGCGTAGGAAGTTTT
TTAGTGTGCTCTGTGAAAAGAATAGAAAAAAAGCAATATTTATGCTAAATGCTAATAATA
TTAGTATATAGGAAGATCTGTTAAAATAAAACATATTAGAAATTAAGTTTTCGGATTTTA
TGATATATCAAAATAGAGATGCAGCTGAATGAAAGTGTAAAAATTTGTGCTCAAATAAAC
TTGTCTGTCCAGTACAAATCATACTACTTTTATGTTTGCGGATTAGAACGTGCGGTTCAC
TATTTACATAATATTTAAGACTGCTATATAAGGTTTGCTGCAAATAAAGCATTTTAGGAT
AATGTGATTTTCGGAAAACACGTTCAATGTGTTTTCGTTATTATCGTATGTAAGTTTCAT
TAAGTGTAACTGTAAAGCGGAATTATATTTTAATTTTCTTTTTAATAATGATAGTGAATT
AAAATATTTTGTTTAAATATTATGCAATTCCTAGTCCTAGTCAATGCGTATAGAATATTG
AAGATCAATCAAATTTATTATATGCGTACATAGGTCACACATAAACATACTAAAAGCACA
TTAGAAAACATACAATATTGATTAAAGTTTTAAAAATCCAATAGTGACATTGAATTATAA
AAAGGAATGTTAAGCGTTTGCATTGAATTTTGACAAATATATGCTATGAGATTCATAGTG
AGCTTCAAGTAATTTTTCAATGTTGACAGGACCATTGAAATTTTGGATTGCGTTGAAAGG
GCCGGATTTACAGACCCATGATATATTTTAATGTAGAAATTTGCTTGTCTCCATTTTAGA
TTTTAATCATAGTGTAACAGTAAAACGTTCATTACTTTTACTACATTGTACGACTTGAAA
GATTAGGCATTATAATGTAATTGTAAATAGTATACTGTAGTTATTAAATAAAAACTTGAA
ACATATCTGCTTGTTTATGTTCAATAACCCTTTGTTAATGTCCTTGGAGAATATGTGTTA
TTAATAACACATAT
(7514 bp)

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