SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70324_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		shc_transforming_protein_[Danaus_plexippus]
Ontology
GO:0000187 P obsolete activation of MAPK activity
GO:0001525 P angiogenesis
GO:0001666 P response to hypoxia
GO:0001784 F phosphotyrosine residue binding
GO:0005154 F epidermal growth factor receptor binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007568 P aging
GO:0008286 P insulin receptor signaling pathway
GO:0009636 P response to toxic substance
GO:0010008 C endosome membrane
GO:0014070 P response to organic cyclic compound
GO:0030036 P actin cytoskeleton organization
GO:0030182 P neuron differentiation
GO:0030971 F receptor tyrosine kinase binding
GO:0031100 P animal organ regeneration
GO:0031175 P neuron projection development
GO:0032403 F protein-containing complex binding
GO:0032868 P response to insulin
GO:0032869 P cellular response to insulin stimulus
GO:0035094 P response to nicotine
GO:0035556 P intracellular signal transduction
GO:0040008 P regulation of growth
GO:0042542 P response to hydrogen peroxide
GO:0045740 P positive regulation of DNA replication
GO:0045907 P positive regulation of vasoconstriction
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0051219 F phosphoprotein binding
GO:0051384 P response to glucocorticoid
GO:0051721 F protein phosphatase 2A binding
GO:0070435 C Shc-EGFR complex
GO:0071363 P cellular response to growth factor stimulus
Transcript
Level		FPKM:3.53 TPM:6.15
ORF EntryO_BomoEE22029_complete:A_BomoEE_comp70324_c0_seq1
Sequence
(Nucleotide)
CCATAGGTTTCCTACTTCATTGGTACCTTGCTGTAAAGTACAAGAAATATTCAATAAGGG
TATTCTTTTCATATATAAACAAATAGGTAGTTACAAAAATATATTTTCCTTAAAATGTTT
TCCAACTGAAATTATTAGGCACAATTAAACTTTAAAAAAAAAAACATAACAGCATGTTTA
TGTCAGTGGTTAAAATGATTATAGTCTCTTCTTACCGTTAAATATTAGTGAGTCAGATAC
ACAAGATATATTGGATTTTATACTATGTACCTTTAGTCGTAACGTACGCTATAACTTGAA
TCGCTATCTATAACTTCGAATAAATTCTACATGTGCGTTTACAATAGGGATCTCTTATAA
ACTAACATATCTGAAATATGGGAAATAAAATAATAATTAAAGCATTTATAATTACGATTT
TGGTTTTTATACCTACAACGCTAAACATTTTACGCATTTTATAATTACAAAAAGAAATTT
TGTGATGCGTTATATAATTTTTTGTTTATTCCTACTATTTTCAGAATTTTTGTAAGCCAT
TTCATAGCACCTATCATTTAAAACCACATATTTAATATTACAAGATTGCATTGTTTTTTA
AAAGTCACATTTATACTCATTACAAATACATCAATATATAAATTACAGCCATATTAGCAC
ATTCAGATGCATTTACATAATTCCATAATTTCACAGGTCATGGTTATTTTTTATATCTAA
TTTAAAAGATTTAATTTACTATAATATATCTAAAACAGTATCCGAAACAGATTGTTTTAT
TCACTATTACATCACTAAAATTTAATCACTTATTTCCTGATTATTTTTTTGTAAACACGG
CAGAACTCCCTTATGAGCTTGCAGAAGAAAATACCGAACAGCCAGGTAAGTACATATTTC
TAAGTATAACATACATAGTGCTACATTAAAATACATAGTGCTTATTACATCTTCCACAAA
TTTAACATAAGAACATAAACATCAGTATATTATTTTAAAAGATGAACCAATGTACATAAT
TTGATTACTAAATATAAGTAACATACTTTATTATGATATTGAGAATTGATCATATTGTTT
CGATGGTCATGGTTAAGATATGATTATTTAAAAATAATAATATTCATTTCGGGCCTTTTA
TTTGTATCATGATAATTATCATGACATATTAAATTCATTATATTTAATTTCAAATTTGAT
AACATTAAAAATATTTCCTTTATGCATTTTAAAGTCTTAATAGATTATTGAACAAATACA
TTTATAACATAAGTACTTTGTTTATGGTCTGTGTATAAGAAATGTTAAAATATTTATTAA
ATACAATTTATCTAACTTGTCAATTCCTGTACAGTGTTAATGCTTAAAATAATGAGTATA
AAACAACTATTGACTCATAATTTTATATAGAACAGAAGGTTATTTGCACGAAATTTTATA
GCAAACATTTGAAACGTAAAAAAAGACGCACTTGCTAAACTTTTTAAAATTATTTCATGT
TGCAACTTTATATTCGTTTATAATAACAAATAAATAGTTCACATAGTGAAGGGAATTACG
GTTTAGGACCGAATTTTTTAATAATTGTCATAGATATGGTCAACCTTAATAAAACAGTTC
ATAAAATAACATTCTGTAGTACAATTAAAATAATTAATGCATAAACAAAGAATCATCAAT
GTATATTAAATTTAGTGCAATTACTATTATTACTACATATTTAGAATATGTCAAAGAGCA
TTACATATATTTGTTGGATAAAAAAAATCATTAAATTCTTTGATAAGCTAAGACATTTTT
ATATTCATACCTATTATTATATTTTAGTCTTTATATTCCACGTTTATTTGTTTATTTATA
TTTGATTATATCATTATTTACTCTCTAATTTTTCAATGTCATTAGACAAACATTTTATTA
TTAGCGTTTAATACTGTTAGAATACATTTTTTTAGTTTTTGTGGAATGTTAACTTTCTGT
AGTCAACGTAGATTATCTTTAAGTCTCAGGAAGACGACCTGAGGACCGGCTTACGGAGTA
GTAGAGCGGAATCCGCTGAGACTATGGGCAGCTCGTTAGAACAGTGGTACTTGATTAGAT
GGGGTACACTGTCGAACACCCGATCTTTAGTTCGTACCACCCCTATAGGATCGACGAGTA
GTAGATGTTTGTGCAGGCCCCTCCTGGCGCCCGTCAGTACGAACTGGCCCGCGCACGCCG
TCGACTCGCGCACCAAAAACTCGCCATCCTCAACTACCAACTTTTCAGCAGTAGTCCTAG
AAATAGGTCCGTGGAACCAGGGCTCCTTAGCCAGCAGCGCGGCCTGCGCCTCGGCAGTGA
GCGGCGCGCATTCGGCGGACGCGGACGTGCCCGAGGTCACAGAGGACGACGACGACGTGA
CCGGGGCCGCCGTGAATGGCTGCATGTCAAAAATGTCCGTGTGGTGGTTCGGCAGCAGCG
CGGTGGGCGGGGTCCGCGGCGGGGGGGTCTGGTTCACGTAGTGCCTTACGCTTTCCTCGC
ACGAGGAGAGCGGTGCGAGTGACGTCAGCGAGGCGAGGGGCGGGGGCGGGGGGTGGCGGT
GCGAAGTCGGCGCCAGCTCGGGCGGCACCTTGTCCGGCATGTCGTTGTAATACTCTCTGT
CCTCCACTAGCCCACAAGCGCTTTCGCAGCTGGGCAGAGATCCATTGAGATTTAATGTCG
AGGGTTTCGTTAAAAATTCCTTAAAACGCAACTCGAAGGCCTGTCCTATCGTCGCTATCA
CGTCTTGCGCCAGTCTTCCACCGCATTCTAGAACGTAGCACGCTCTCCACTCCGTCGGTG
GAGCTGATTTGGCCACGTACGCTACATAGTCTAACGAATCCGCATCTCCGCCCGAGGCAA
ACGATACTCTGGGCATGTCGTGTCGCGCTATGGTGTCGCCGCCTTCCAGAACCGCCAGGG
TTATTGCTTTCGATGATACGGTTAGGGCGACGTTGGCGCCCGAATGGGACATGCGCGGTC
TGGCCGTAAGCGCACGGGCGGCTGCTTGAGACACACGACGCTTCTTATCCGCGGAACGAA
GACCTGCGGCTGCACATACTCTTGCTATGCATTCCTTGGCAACTTGTGATCTGGTATCGA
AGTCTAATTTTTTCATCGATGTTAAAACTTCCATGCACCCAATATACCTGACGGCATACG
TTACTCCGTCGGAGGCTAATACTGAGTCGGGATGCAACCAACCCCGCGCCGGCTTGGCCA
CAAATGATCCACTTTCCGCCATCTCACAGTGAATATTAACAGTTTAACGAATGAAAAATT
GACACTTTAATCTTCACCCTTCACATGATTCCAGCAATTTCAAAGTAAACTAAGTACACT
TTCATTGTGAGTTGTGAATCAAAGTTTTTTTTTTCGTGGCAAAATTACTTTTTTTTTCCT
TTTAATACTTTTTTTATTGGTATTTTAAATGACTAACTGCAATGTTCTAACAGCAGTAAT
AATTTCTTAGACAAATTAAATACAGATGTTATAAATCTTAAATTAAAAATATAAAACAAG
TCCACTTAGCCCAAAT
(3556 bp)

- SilkBase 1999-2023 -