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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70258_c0_seq7
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_intraflagellar_transport_protein_140_homolog_[Amyelois_transitella]
Ontology
GO:0001750 C photoreceptor outer segment
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008589 P regulation of smoothened signaling pathway
GO:0021532 P neural tube patterning
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0031513 C non-motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035108 P limb morphogenesis
GO:0035721 P intraciliary retrograde transport
GO:0035845 P photoreceptor cell outer segment organization
GO:0036064 C ciliary basal body
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0048705 P skeletal system morphogenesis
GO:0060041 P retina development in camera-type eye
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072001 P renal system development
GO:0072372 C cilium
GO:0097542 C ciliary tip
GO:1902017 P regulation of cilium assembly
Transcript
Level		FPKM:3.76 TPM:6.55
ORF EntryO_BomoEE21795_complete:A_BomoEE_comp70258_c0_seq7
Sequence
(Nucleotide)
CACAACAGGTCCTACCACCAGTAAAAATATTTAAAACTATCATGCACAATAGCAATGATA
AGTACTGTGAGTAATACTCGTGTGCAAAATTCATAAATCTATAACTTTAACTTCCATAGT
TAAACGATTTCTTCGATACTTTGATTTGGAGACGCCGTACTTTGTCTGTCGTCATCTGTG
GAATCTCTCTGTATAACTCTAAGTTTTTGCTCGAAATCACCGTGATCAGGAGCATGTCTA
AGTAATAGGCGAAGGACTTTTTCTTCTGTCACGAGACCGGATCGACCGCTGACGGCTCGA
AGAAGTTGTTGACCACTTGTTACACCAGCACTGATTTCTCCAGACTCAAATATCTTTTTC
ACATCCAGAAATCGTTTGACGAGGGTACTCTGTTCTTGTAGAGCCATCGTTTGAGAACCA
GTTTCTGTATCAGTACACTTCGCTAGGCAACGGACGGCTTCTTTTAGAGCTTCAAGTGCT
TTTTCATAGTTGTCATACTCATCGACTTCTGTCTTGGCACATTCCGCGTAGAAAGCGGCT
AGTTTACTGTACGCCTTGGCTCTCGTGTAGAAATGCAAAATATGGCGCATAAGGTCCGGT
CTCGTTCGCCAGTCGGCGTGGCGTCGCAGGTAGTCCGCCGCCATCAATTGGGCGTTGCGA
TCCCGTGTTGCCGCTGCAAACGTAGCGATGCGGTCGGCGTCTCCGGAACGCATTAACCAA
CGCATCGCGCCTGCCTTATCGCCGGCATGGGCAAGACGCTTGGCAGCCTGGTGGTATAGG
CCGCGAGTGCCTAACACGTCAGCGAGGCGCCGCAAGAGGACATCACGTCCACTAGTCCCG
GCAGGAGCGGCCAACCTTTCACTCAATTCTTCCGACAATGGTGCCGAGCTTTGCTCCACC
AACTCTAATGCTTCTTCATATTTTCCTGCCGTAGCTAGAAGTGCAGCTGCATGCGAGTGA
TGGTTTGCCTTCCGTAAATGTGATGCCAGAGTGTGAGCCACTTCTGGGTCTACTCGATCG
CCCAATGATTCTACAGCAGCAACCATTGCGTTTGTGTCACCGGAATCCAGAGCTAATTTT
AACGCCATATGTATTTTTCCCGCTTTTTGATACAACGCAATCGCTTGTTCTATTTGTCCA
GCATTCTCAAGTATAGATGCTGCGTATAGAGCGTGAGTTGGTGAGGAAGAGCCAGCTCGC
CAAACAAGATTCCAAGCGCTTGCCTCAGCTGCAACACGGACAGCCGACGACACAGCACCA
CTTTTCATATACATCTTTACAGCGTTTTCAGTTTTGTCGGGTTGCATTTCAAAATAGCGG
GCCATTTGGTACACAGCGGTTCGATTATTTTGGCATAACTTCTCTGCCTCGTCTATTCTA
TCCATGTGACAAAGTAACCTAGTTTGTTCACCGAAATCATTAGCGCGGGCATATGCTGAA
AGCGCTCCGTCTAGATCGCCTAAACTTTCCAAATAATGTCCCCACCATGTTATCAAATTT
GTATCATTTGAATTAGCTACATGCTGAGCTAGTACCGATGTTTGGCCTTGAGCTATTAAC
ATTCTGGGAACATGTGGTACTAAAGTTCCGGCACTTTCAAATAGCTTAATCGATGCGTTT
GTTTCTCCATTAGACCACAAATGTTTAGCTAATTTGTGTTGTGCACTTTTAATCAATAAC
ATATTTTCACCGTCTTTATTTCCTTCAATTATTTGAAGTAGTCCACCTTCCTTTGCTGAT
ACGAGCCGAGTGATTAGATCAGGCCTTTGTGCTTCACGAAATAGCTTTTCGGCTTCTTCT
ATCATACCAAGATTTACAGCAAGCACTGCTACTTTGCAGTTGTCATCCATGCTGTTGTCA
TTCATGACTTTACGCATCATTAGAGCACCTTTTATGTTTTCCATTTTGCTAAGACATATT
GATCCTACATCAGGACGTTTCAGAGATACGCACATCTTTGCTAAGCTATACCAAATGACC
TGGCTGGTACCACCAGAAATACTAGAACCCACGACGACAGCCTTTTCTAAGTTTCCTGTT
GTCGTATAATAAAGGAAATCTAAAACTTGTTTTACTGTGCTTGTATCGCAGTCGTTTACA
TCTTTAAATTCACTCATCAAAAGTCTCTTTATATTTTGCTGCGACAATATGACTACGTGT
GGACTACATAAGGAACAAAGTATAAAATCCGTTTGAACATAATCTTCCGTCGCGGAGCAC
CAATTCACGTATTCATGAAGTTTTCCTTCATGGCAGAAAAATAAATAGATTTTATCTGAT
TCTGCTGATCTCATGTGTACGGCTACAATTCTCGGATCACTGTTATCCCATATTATTGCA
ATAGGTACCGTTTGGTATGGAGGTTTTGAACTTTCAGCGATGAGGATATTGGTTATGATA
TCGTTAGCTGCATCCCATAAGTAAATCCTTGGGTCTGGGGCTAAACCGGAATTAGCTACG
CTCAAACAAATGTAACGTCCATTACAACTTACAGATGCTCTCATAACTTCACCAAAATCT
TCAATAACTTGATAACAATTTTTGGGGGGACATGGCATTTTTAGTCCTTTTTTAGTGATC
TCAGCTAGTTTGAGTGTTCCGTCCAAAGTAACAATTATAACGTATTTATTTGTTTGAGTG
ATACTAATTGGTTCTCCTTCACCTTCGCTAGTAGGCAGACTTCCGAGGCGTACACCCGTA
ACTGAATGACATTCGATGTGCGGATTAATTATACCAACTAGTATGTCATTATATAATATT
AGCACATCTGTTTTCCATGGAAAGGTTCTTATCATTGAAAAATTCAAGTCATTATCTTTG
TTACACATCCAGATCTGTACATCAGTTCCATCTCCTATGGCAATATATTGGTCTCTGAAT
GCAAAAGCCCTTATGGTTACATTGCTCTTTATTATTGTTGTGTTTTCATTTATGTGATTT
ATAAATATCTCATTAGCAGATTTCTGTACCATTGATATATTGGGAGAGTAGCCCCAACAA
ACAGGTTGTTCCCGTAAAATATATGCACTGGTTATACAGTTTACATGTAACAGTGGGTTC
ATTAATCCTTCAGAACCCCAACTGACACCTTTAATTGTTCCTTTAACAGATGTACTACTT
ATCAGTTTCCAAATATTCCGATAATCTCGTCTCCATAGATATAAATTACCTTGTGCTGTG
CCACAGCAAAGAGTATCACTTAAATTGCAATAAGTAATACTCGAAAAAGTGTCACCTTCA
GATATGTTTTCATTCTCATTTAGCAGAACATCATTATCGCCAGTCTCACTATCCCACACT
CTGACAACATTGTCTCCTGTGATTACAGCCACAAAGAAATTTCCAGCCAGTACAATTGAC
TGTCCATTTCTTGCAGCCATTCTTACATGAGTGTCAGTTGTTAATGAGCCTTCATCAGAG
GTTAGGAATCTTGTCAAGCTTAATGCACCACCGGATTCCCATGCAACAAGAAGATATATG
TTGCTTATTATACCCATGAACATTATACTGCCAGGGGCATTGAGTACTTCTGAGCATGCA
CCTGTCTGGTCAATATAAAGTATCACTCCATTATCTTGGACTGCATAGCATGAATGATTA
TCAGGTTGTGAACCTTCTCTTATTTTAGCTGTTGTTCTAGGTCTCCAAGCTGCTAAAGCA
TCTAGAGCATTTTCATCTCCAGCAACTGCTGCTCGAGCTAAACCCCTAATAGAAGATTCT
GTACTTGGTCTAGGGGTACAGAAAGAAATATGAGTTATGACTTCACCAAGTTGATGATGA
AAAGATGTAAGTGGTGCTCCTGAACTGGATTGCCAACCTGACAATGATCCTGCAGCATCA
GATGCAAGCAATCTCCCTCCTCCAGAGCTAAAAGCAATATTAGTTAATGCTGCATTGTGA
GGTGCTTCTAATCGGGCCCATGAGTACTCAAGCCAGATGTAAAGCTCTCCACCATCCCAT
CCAACAACCAACAACCGCCTTGTTGGATGCCAAGCAAGAGCAGTCACTTGATTAGATGAC
AAAATGGGCCATTCACAACCCTCTAAAGGTAAACCGTTTTCTTGGAAAATTGTAGCAAAA
CCACCTTTTTCTTGATTGTAAGATCCAATAGCCAAAAATGGCAATGAAGGGTGCCAGGCA
GCCACAGTTGACACCACATTCTCATCAGAAAAACTAAGTTTAGTATCTATGTATAGAGTC
ATAATGAGAGTCGATATTATTTCTTTTACTGATTTCTGGTCACTGAATTTTTTCTACTTC
ACGCCATCTACAGATTTGTTTTTGCCTAGTTCACTAAAGTTAAAATTTCATCCAAAATTA
TTTTGTGTTTTGTATCAAAATAAATAGAGGTACAATCGATATGTTGGTTTAATGTTTACA
TCATAAGCATGCTGTGCTGTGTAAAGAATATATTATCTTTTTAAATTTATCGTATTGTAT
GTATATTTTCAGGAATATTTAGTGATTTTTACAGCATTTAGATTTACATTGAGTATATTA
TTAATATAATAATATTATGTTAGTGATGTTCTTGATCTGTATTTTATTGGCGTTTCACAT
CTAAATAACAATTTTTTTTATTCTCTCTCATATGAAATTAACTATTGTGTTTAGTAACTA
AAGGTATTTATATCTGTTTACATTGATTGAAAGTTGTTGATGCTTGTCAAATGTTTGTAG
GTACGTACGTACCGGTAAAATGGGGCGATTA
(4711 bp)

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