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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70258_c0_seq5
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_intraflagellar_transport_protein_140_homolog_[Amyelois_transitella]
Ontology
GO:0001750 C photoreceptor outer segment
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008589 P regulation of smoothened signaling pathway
GO:0021532 P neural tube patterning
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0031513 C non-motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035108 P limb morphogenesis
GO:0035721 P intraciliary retrograde transport
GO:0035845 P photoreceptor cell outer segment organization
GO:0036064 C ciliary basal body
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0048705 P skeletal system morphogenesis
GO:0060041 P retina development in camera-type eye
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072001 P renal system development
GO:0072372 C cilium
GO:0097542 C ciliary tip
GO:1902017 P regulation of cilium assembly
Transcript
Level		FPKM:2.23 TPM:3.88
ORF EntryO_BomoEE21793_complete:A_BomoEE_comp70258_c0_seq5
Sequence
(Nucleotide)
CACAACAGGTCCTACCACCAGTAAAAATATTTAAAACTATCATGCACAATAGCAATGATA
AGTACTGTGAGTAATACTCGTGTGCAAAATTCATAAATCTATAACTTTAACTTCCATAGT
TAAACGATTTCTTCGATACTTTGATTTGGAGACGCCGTACTTTGTCTGTCGTCATCTGTG
GAATCTCTCTGTATAACTCTAAGTTTTTGCTCGAAATCACCGTGATCAGGAGCATGTCTA
AGTAATAGGCGAAGGACTTTTTCTTCTGTCACGAGACCGGATCGACCGCTGACGGCTCGA
AGAAGTTGTTGACCACTTGTTACACCAGCACTGATTTCTCCAGACTCAAATATCTTTTTC
ACATCCAGAAATCGTTTGACGAGGGTACTCTGTTCTTGTAGAGCCATCGTTTGAGAACCA
GTTTCTGTATCAGTACACTTCGCTAGGCAACGGACGGCTTCTTTTAGAGCTTCAAGTGCT
TTTTCATAGTTGTCATACTCATCGACTTCTGTCTTGGCACATTCCGCGTAGAAAGCGGCT
AGTTTACTGTACGCCTTGGCTCTCGTGTAGAAATGCAAAATATGGCGCATAAGGTCCGGT
CTCGTTCGCCAGTCGGCGTGGCGTCGCAGGTAGTCCGCCGCCATCAATTGGGCGTTGCGA
TCCCGTGTTGCCGCTGCAAACGTAGCGATGCGGTCGGCGTCTCCGGAACGCATTAACCAA
CGCATCGCGCCTGCCTTATCGCCGGCATGGGCAAGACGCTTGGCAGCCTGGTGGTATAGG
CCGCGAGTGCCTAACACGTCAGCGAGGCGCCGCAAGAGGACATCACGTCCACTAGTCCCG
GCAGGAGCGGCCAACCTTTCACTCAATTCTTCCGACAATGGTGCCGAGCTTTGCTCCACC
AACTCTAATGCTTCTTCATATTTTCCTGCCGTAGCTAGAAGTGCAGCTGCATGCGAGTGA
TGGTTTGCCTTCCGTAAATGTGATGCCAGAGTGTGAGCCACTTCTGGGTCTACTCGATCG
CCCAATGATTCTACAGCAGCAACCATTGCGTTTGTGTCACCGGAATCCAGAGCTAATTTT
AACGCCATATGTATTTTTCCTTTACAGCGTTTTCAGTTTTGTCGGGTTGCATTTCAAAAT
AGCGGGCCATTTGGTACACAGCGGTTCGATTATTTTGGCATAACTTCTCTGCCTCGTCTA
TTCTATCCATGTGACAAAGTAACCTAGTTTGTTCACCGAAATCATTAGCGCGGGCATATG
CTGAAAGCGCTCCGTCTAGATCGCCTAAACTTTCCAAATAATGTCCCCACCATGTTATCA
AATTTGTATCATTTGAATTAGCTACATGCTGAGCTAGTACCGATGTTTGGCCTTGAGCTA
TTAACATTCTGGGAACATGTGGTACTAAAGTTCCGGCACTTTCAAATAGCTTAATCGATG
CGTTTGTTTCTCCATTAGACCACAAATGTTTAGCTAATTTGTGTTGTGCACTTTTAATCA
ATAACATATTTTCACCGTCTTTATTTCCTTCAATTATTTGAAGTAGTCCACCTTCCTTTG
CTGATACGAGCCGAGTGATTAGATCAGGCCTTTGTGCTTCACGAAATAGCTTTTCGGCTT
CTTCTATCATACCAAGATTTACAGCAAGCACTGCTACTTTGCAGTTGTCATCCATGCTGT
TGTCATTCATGACTTTACGCATCATTAGAGCACCTTTTATGTTTTCCATTTTGCTAAGAC
ATATTGATCCTACATCAGGACGTTTCAGAGATACGCACATCTTTGCTAAGCTATACCAAA
TGACCTGGCTGGTACCACCAGAAATACTAGAACCCACGACGACAGCCTTTTCTAAGTTTC
CTGTTGTCGTATAATAAAGGAAATCTAAAACTTGTTTTACTGTGCTTGTATCGCAGTCGT
TTACATCTTTAAATTCACTCATCAAAAGTCTCTTTATATTTTGCTGCGACAATATGACTA
CGTGTGGACTACATAAGGAACAAAGTATAAAATCCGTTTGAACATAATCTTCCGTCGCGG
AGCACCAATTCACGTATTCATGAAGTTTTCCTTCATGGCAGAAAAATAAATAGATTTTAT
CTGATTCTGCTGATCTCATGTGTACGGCTACAATTCTCGGATCACTGTTATCCCATATTA
TTGCAATAGGTACCGTTTGGTATGGAGGTTTTGAACTTTCAGCGATGAGGATATTGGTTA
TGATATCGTTAGCTGCATCCCATAAGTAAATCCTTGGGTCTGGGGCTAAACCGGAATTAG
CTACGCTCAAACAAATGTAACGTCCATTACAACTTACAGATGCTCTCATAACTTCACCAA
AATCTTCAATAACTTGATAACAATTTTTGGGGGGACATGGCATTTTTAGTCCTTTTTTAG
TGATCTCAGCTAGTTTGAGTGTTCCGTCCAAAGTAACAATTATAACGTATTTATTTGTTT
GAGTGATACTAATTGGTTCTCCTTCACCTTCGCTAGTAGGCAGACTTCCGAGGCGTACAC
CCGTAACTGAATGACATTCGATGTGCGGATTAATTATACCAACTAGTATGTCATTATATA
ATATTAGCACATCTGTTTTCCATGGAAAGGTTCTTATCATTGAAAAATTCAAGTCATTAT
CTTTGTTACACATCCAGATCTGTACATCAGTTCCATCTCCTATGGCAATATATTGGTCTC
TGAATGCAAAAGCCCTTATGGTTACATTGCTCTTTATTATTGTTGTGTTTTCATTTATGT
GATTTATAAATATCTCATTAGCAGATTTCTGTACCATTGATATATTGGGAGAGTAGCCCC
AACAAACAGGTTGTTCCCGTAAAATATATGCACTGGTTATACAGTTTACATGTAACAGTG
GGTTCATTAATCCTTCAGAACCCCAACTGACACCTTTAATTGTTCCTTTAACAGATGTAC
TACTTATCAGTTTCCAAATATTCCGATAATCTCGTCTCCATAGATATAAATTACCTTGTG
CTGTGCCACAGCAAAGAGTATCACTTAAATTGCAATAAGTAATACTCGAAAAAGTGTCAC
CTTCAGATATGTTTTCATTCTCATTTAGCAGAACATCATTATCGCCAGTCTCACTATCCC
ACACTCTGACAACATTGTCTCCTGTGATTACAGCCACAAAGAAATTTCCAGCCAGTACAA
TTGACTGTCCATTTCTTGCAGCCATTCTTACATGAGTGTCAGTTGTTAATGAGCCTTCAT
CAGAGGTTAGGAATCTTGTCAAGCTTAATGCACCACCGGATTCCCATGCAACAAGAAGAT
ATATGTTGCTTATTATACCCATGAACATTATACTGCCAGGGGCATTGAGTACTTCTGAGC
ATGCACCTGTCTGGTCAATATAAAGTATCACTCCATTATCTTGGACTGCATAGCATGAAT
GATTATCAGGTTGTGAACCTTCTCTTATTTTAGCTGTTGTTCTAGGTCTCCAAGCTGCTA
AAGCATCTAGAGCATTTTCATCTCCAGCAACTGCTGCTCGAGCTAAACCCCTAATAGAAG
ATTCTGTACTTGGTCTAGGGGTACAGAAAGAAATATGAGTTATGACTTCACCAAGTTGAT
GATGAAAAGATGTAAGTGGTGCTCCTGAACTGGATTGCCAACCTGACAATGATCCTGCAG
CATCAGATGCAAGCAATCTCCCTCCTCCAGAGCTAAAAGCAATATTAGTTAATGCTGCAT
TGTGAGGTGCTTCTAATCGGGCCCATGAGTACTCAAGCCAGATGTAAAGCTCTCCACCAT
CCCATCCAACAACCAACAACCGCCTTGTTGGATGCCAAGCAAGAGCAGTCACTTGATTAG
ATGACAAAATGGGCCATTCACAACCCTCTAAAGGTAAACCGTTTTCTTGGAAAATTGTAG
CAAAACCACCTTTTTCTTGATTGTAAGATCCAATAGCCAAAAATGGCAATGAAGGGTGCC
AGGCAGCCACAGTTGACACCACATTCTCATCAGAAAAACTAAGTTTAGTATCTATGTATA
GAGTCATAATGAGAGTCGATATTATTTCTTTTACTGATTTCTGGTCACTGAATTTTTTCT
ACTTCACGCCATCTACAGATTTGTTTTTGCCTAGTTCACTAAAGTTAAAATTTCATCCAA
AATTATTTTGTGTTTTGTATCAAAATAAATAGAGGTACAATCGATATGTTGGTTTAATGT
TTACATCATAAGCATGCTGTGCTGTGTAAAGAATATATTATCTTTTTAAATTTATCGTAT
TGTATGTATATTTTCAGGAATATTTAGTGATTTTTACAGCATTTAGATTTACATTGAGTA
TATTATTAATATAATAATATTATGTTAGTGATGTTCTTGATCTGTATTTTATTGGCGTTT
CACATCTAAATAACAATTTTTTTTATTCTCTCTCATATGAAATTAACTATTGTGTTTAGT
AACTAAAGGTATTTATATCTGTTTACATTGATTGAAAGTTGTTGATGCTTGTCAAATGTT
TGTAGGTACGTACGTACCGGTAAAATGGGGCGATTA
(4536 bp)

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