SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70258_c0_seq4
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_intraflagellar_transport_protein_140_homolog_[Amyelois_transitella]
Ontology
GO:0001750 C photoreceptor outer segment
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0007368 P determination of left/right symmetry
GO:0007507 P heart development
GO:0008589 P regulation of smoothened signaling pathway
GO:0021532 P neural tube patterning
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0031513 C non-motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035108 P limb morphogenesis
GO:0035721 P intraciliary retrograde transport
GO:0035845 P photoreceptor cell outer segment organization
GO:0036064 C ciliary basal body
GO:0042073 P intraciliary transport
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0048705 P skeletal system morphogenesis
GO:0060041 P retina development in camera-type eye
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
GO:0072001 P renal system development
GO:0072372 C cilium
GO:0097542 C ciliary tip
GO:1902017 P regulation of cilium assembly
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_BomoEE21791_3prime_partial:A_BomoEE_comp70258_c0_seq4
Sequence
(Nucleotide)
GTCATAAAATCCCTTATAAAAAAATAAATTAGAATTGTTAATACTTTTCCTGCCGTAGCT
AGAAGTGCAGCTGCATGCGAGTGATGGTTTGCCTTCCGTAAATGTGATGCCAGAGTGTGA
GCCACTTCTGGGTCTACTCGATCGCCCAATGATTCTACAGCAGCAACCATTGCGTTTGTG
TCACCGGAATCCAGAGCTAATTTTAACGCCATATGTATTTTTCCCGCTTTTTGATACAAC
GCAATCGCTTGTTCTATTTGTCCAGCATTCTCAAGTATAGATGCTGCGTATAGAGCGTGA
GTTGGTGAGGAAGAGCCAGCTCGCCAAACAAGATTCCAAGCGCTTGCCTCAGCTGCAACA
CGGACAGCCGACGACACAGCACCACTTTTCATATACATCTTTACAGCGTTTTCAGTTTTG
TCGGGTTGCATTTCAAAATAGCGGGCCATTTGGTACACAGCGGTTCGATTATTTTGGCAT
AACTTCTCTGCCTCGTCTATTCTATCCATGTGACAAAGTAACCTAGTTTGTTCACCGAAA
TCATTAGCGCGGGCATATGCTGAAAGCGCTCCGTCTAGATCGCCTAAACTTTCCAAATAA
TGTCCCCACCATGTTATCAAATTTGTATCATTTGAATTAGCTACATGCTGAGCTAGTACC
GATGTTTGGCCTTGAGCTATTAACATTCTGGGAACATGTGGTACTAAAGTTCCGGCACTT
TCAAATAGCTTAATCGATGCGTTTGTTTCTCCATTAGACCACAAATGTTTAGCTAATTTG
TGTTGTGCACTTTTAATCAATAACATATTTTCACCGTCTTTATTTCCTTCAATTATTTGA
AGTAGTCCACCTTCCTTTGCTGATACGAGCCGAGTGATTAGATCAGGCCTTTGTGCTTCA
CGAAATAGCTTTTCGGCTTCTTCTATCATACCAAGATTTACAGCAAGCACTGCTACTTTG
CAGTTGTCATCCATGCTGTTGTCATTCATGACTTTACGCATCATTAGAGCACCTTTTATG
TTTTCCATTTTGCTAAGACATATTGATCCTACATCAGGACGTTTCAGAGATACGCACATC
TTTGCTAAGCTATACCAAATGACCTGGCTGGTACCACCAGAAATACTAGAACCCACGACG
ACAGCCTTTTCTAAGTTTCCTGTTGTCGTATAATAAAGGAAATCTAAAACTTGTTTTACT
GTGCTTGTATCGCAGTCGTTTACATCTTTAAATTCACTCATCAAAAGTCTCTTTATATTT
TGCTGCGACAATATGACTACGTGTGGACTACATAAGGAACAAAGTATAAAATCCGTTTGA
ACATAATCTTCCGTCGCGGAGCACCAATTCACGTATTCATGAAGTTTTCCTTCATGGCAG
AAAAATAAATAGATTTTATCTGATTCTGCTGATCTCATGTGTACGGCTACAATTCTCGGA
TCACTGTTATCCCATATTATTGCAATAGGTACCGTTTGGTATGGAGGTTTTGAACTTTCA
GCGATGAGGATATTGGTTATGATATCGTTAGCTGCATCCCATAAGTAAATCCTTGGGTCT
GGGGCTAAACCGGAATTAGCTACGCTCAAACAAATGTAACGTCCATTACAACTTACAGAT
GCTCTCATAACTTCACCAAAATCTTCAATAACTTGATAACAATTTTTGGGGGGACATGGC
ATTTTTAGTCCTTTTTTAGTGATCTCAGCTAGTTTGAGTGTTCCGTCCAAAGTAACAATT
ATAACGTATTTATTTGTTTGAGTGATACTAATTGGTTCTCCTTCACCTTCGCTAGTAGGC
AGACTTCCGAGGCGTACACCCGTAACTGAATGACATTCGATGTGCGGATTAATTATACCA
ACTAGTATGTCATTATATAATATTAGCACATCTGTTTTCCATGGAAAGGTTCTTATCATT
GAAAAATTCAAGTCATTATCTTTGTTACACATCCAGATCTGTACATCAGTTCCATCTCCT
ATGGCAATATATTGGTCTCTGAATGCAAAAGCCCTTATGGTTACATTGCTCTTTATTATT
GTTGTGTTTTCATTTATGTGATTTATAAATATCTCATTAGCAGATTTCTGTACCATTGAT
ATATTGGGAGAGTAGCCCCAACAAACAGGTTGTTCCCGTAAAATATATGCACTGGTTATA
CAGTTTACATGTAACAGTGGGTTCATTAATCCTTCAGAACCCCAACTGACACCTTTAATT
GTTCCTTTAACAGATGTACTACTTATCAGTTTCCAAATATTCCGATAATCTCGTCTCCAT
AGATATAAATTACCTTGTGCTGTGCCACAGCAAAGAGTATCACTTAAATTGCAATAAGTA
ATACTCGAAAAAGTGTCACCTTCAGATATGTTTTCATTCTCATTTAGCAGAACATCATTA
TCGCCAGTCTCACTATCCCACACTCTGACAACATTGTCTCCTGTGATTACAGCCACAAAG
AAATTTCCAGCCAGTACAATTGACTGTCCATTTCTTGCAGCCATTCTTACATGAGTGTCA
GTTGTTAATGAGCCTTCATCAGAGGTTAGGAATCTTGTCAAGCTTAATGCACCACCGGAT
TCCCATGCAACAAGAAGATATATGTTGCTTATTATACCCATGAACATTATACTGCCAGGG
GCATTGAGTACTTCTGAGCATGCACCTGTCTGGTCAATATAAAGTATCACTCCATTATCT
TGGACTGCATAGCATGAATGATTATCAGGTTGTGAACCTTCTCTTATTTTAGCTGTTGTT
CTAGGTCTCCAAGCTGCTAAAGCATCTAGAGCATTTTCATCTCCAGCAACTGCTGCTCGA
GCTAAACCCCTAATAGAAGATTCTGTACTTGGTCTAGGGGTACAGAAAGAAATATGAGTT
ATGACTTCACCAAGTTGATGATGAAAAGATGTAAGTGGTGCTCCTGAACTGGATTGCCAA
CCTGACAATGATCCTGCAGCATCAGATGCAAGCAATCTCCCTCCTCCAGAGCTAAAAGCA
ATATTAGTTAATGCTGCATTGTGAGGTGCTTCTAATCGGGCCCATGAGTACTCAAGCCAG
ATGTAAAGCTCTCCACCATCCCATCCAACAACCAACAACCGCCTTGTTGGATGCCAAGCA
AGAGCAGTCACTTGATTAGATGACAAAATGGGCCATTCACAACCCTCTAAAGGTAAACCG
TTTTCTTGGAAAATTGTAGCAAAACCACCTTTTTCTTGATTGTAAGATCCAATAGCCAAA
AATGGCAATGAAGGGTGCCAGGCAGCCACAGTTGACACCACATTCTCATCAGAAAAACTA
AGTTTAGTATCTATGTATAGAGTCATAATGAGAGTCGATATTATTTCTTTTACTGATTTC
TGGTCACTGAATTTTTTCTACTTCACGCCATCTACAGATTTGTTTTTGCCTAGTTCACTA
AAGTTAAAATTTCATCCAAAATTATTTTGTGTTTTGTATCAAAATAAATAGAGGTACAAT
CGATATGTTGGTTTAATGTTTACATCATAAGCATGCTGTGCTGTGTAAAGAATATATTAT
CTTTTTAAATTTATCGTATTGTATGTATATTTTCAGGAATATTTAGTGATTTTTACAGCA
TTTAGATTTACATTGAGTATATTATTAATATAATAATATTATGTTAGTGATGTTCTTGAT
CTGTATTTTATTGGCGTTTCACATCTAAATAACAATTTTTTTTATTCTCTCTCATATGAA
ATTAACTATTGTGTTTAGTAACTAAAGGTATTTATATCTGTTTACATTGATTGAAAGTTG
TTGATGCTTGTCAAATGTTTGTAGGTACGTACGTACCGGTAAAATGGGGCGATTA
(3835 bp)

- SilkBase 1999-2023 -