SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70248_c0_seq8
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_GDNF-inducible_zinc_finger_protein_1-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000278 P mitotic cell cycle
GO:0000976 F transcription cis-regulatory region binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051567 P histone H3-K9 methylation
GO:0070491 F DNA-binding transcription factor binding
Transcript
Level		FPKM:0.61 TPM:1.07
ORF EntryO_BomoEE21771_3prime_partial:A_BomoEE_comp70248_c0_seq8
Sequence
(Nucleotide)
ACTCACAAGACATCCTACCACCAGAACGTAAACTGTCAGCTCGACTCTTGATCAGGATAT
TAAACGCCCCTGTTCGCACGTACCTTAAAAGTCTTCGGGCACCGGTAGCATATGAAGACC
TCTTTGGCTCTGCTCGGGTCGTGGGTCGCCACGTGTCGCACCCAAGACTTTCGATTCGTG
TACCTAGCGTCGCAGACTTCGCAACAGAAGTCCTTCGTCGCCGAGTGGACGGCGGCCATG
TGCGATTCCAGGGAGCGTTTCGTAGGACACAGCCTGTTGCACGCCCGACAGGCGAAAACA
GTCTGCTGATGTGCAAAAGTATTCCTCTTATGGGCCATAAGACTCTTCCGGCTGTTGTAC
GTGACGTCACACGTCTCACAATGATGCAGCGCTGTGACGTCATCATGCTTCTTCTTGTGC
TGGTTCAGGGTGTACGGGCTGCTGAATGTCGAGGGGCATTTGTCGCAGTTGAACTTTCTG
TTGATGTGTTTAATCATATGTGTCCGGACCGCTCCCTGGTTGCTGTAGCTCTTCCCGCAG
ACGCTGCACGAATACGTGCGGTTATTGTTCTTCTGATTGTGGAATCTCTTTAAGTGCTGT
TTCAAATTTGTCGTATCCATGAAAATCCTTCCGCACAAGTGACAAGGGACTTGCGTACCG
TTCGCGTCGACTTTAACCCGTCGTCTAGAACGTTCTAGACTATGAGTCTTGCTGTGCGCG
CGCAATACGGACGCACACGCAAAACGCAGGGTGCACACCTCGCAACGATATTCACCGTTT
GACTCTTCGTGTCTCATCATATGCGCCTGATAAGTGTCCTTAAATAGGAATCCAACAGCG
CAATTATAACATTTGAATTCCGCCTCTAAATACTTCTTCCCTTTCCTCATAGCGTCCAAA
ACCGCTTTCTGCTCTTCTAGATCAGTTAAAATCTTTTTCTGCCTCTTGTTTTTGACCTTC
CTCGTTTTCGTATCGTCCAATTTAGCTGATCCCTCATTTCCATCATCATTTATCATCTGC
ACGTGATCTTCAATAAATTCATTTTGAATTTTTATTTGTTCTGGCACGCTACCTTCGATT
TCGCCATCAATATTATCATCGTCCAAAACGTTTAAAGCGTTAGCACCTTTATCAACAATC
GGATTATCGTTGCCGTAAAATTCATTTAGCGCATCTAGATCTTCGTAGTAATCAATGTAA
TTCCTTTCATCTTGCAGCTGGTGTACGTGATAATCATCTGCGTCTTTACGATTTTCGTCC
AAATTTCGTTCATCACAAACGTATTGGGAGCTATACCCGGTCTGTAAGGTTTGGCATGAG
TCAGACTTCGGGCACAGTATGTGGCATTCCGTGTCGGTTCTTTGCAAACGTATAGGAACA
TCTTCACTGAACAAACTAGGATACTCAGAACTCCTCTTCAGACATTTAGATCTGAATAAC
CATAATTTGTTGAGTATGTGTCTGCATATATGGCACAAATGCGAATCCTGACATAAATTC
ATTCCTATGACTTCGCGATATTTCTCGCGCGTCGCCTCGTTTGTTATAGAGTTGATCGTG
CTATGGCAAACGAAACATAGGAACGACGCCATCGTTGAAACCATTCAAAAATCTCAAAAT
ACACATGTAGACACAAACTGCACTTTTATTTAATCATTAATTTTGTTAATGGTCAACTTT
AGGACGTAAGTAGGTAAACCACTGGAGAGGTAAACATAAACAGCTGAACTTCAAAAACTC
TTTTGACA
(1748 bp)

- SilkBase 1999-2023 -