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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70239_c0_seq1
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_dicer-2_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004525 F ribonuclease III activity
GO:0004530 F deoxyribonuclease I activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006309 P apoptotic DNA fragmentation
GO:0006396 P RNA processing
GO:0016442 C RISC complex
GO:0016787 F hydrolase activity
GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters
GO:0030422 P production of siRNA involved in RNA interference
GO:0030423 P targeting of mRNA for destruction involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0046872 F metal ion binding
GO:0070578 C RISC-loading complex
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_BomoEE21719_complete:A_BomoEE_comp70239_c0_seq1
Sequence
(Nucleotide)
AGTGTTCATTGGAGGCATCGAATATATTATAACATGTCTATTTCTTATATGTCTATGTGA
ATAACGTTCCGTTGGAAATTAAGAGTCTAATATTTTGAGAGCTAATTTCGCGGCGGCCCT
CTTCGCTTGCGATTTGTTGACGCCGACTCCGTAGGCGGCGAGACGCTGGTCGTTCTTCGT
GAACGAAACCGGCACCATTACCTTCGGGATGTCCGGATTGACGACTATTTGTTTTTCGAA
AACCGGACAAGCGTGTATCATTTCGTATAGAATTTTGACGGGCTGCTTCGGTATGCGTTT
CGAGAACGAATCGATCTCGACGTGCATTATCTTGTACAGAACCGACCACACCGTCTCCAG
ATTCCCGCCCGAGTCCAAGTACACGGCGCCGACTAATGCTTCGAAAATGTCGCTCAACAC
CTTCGGCACATCAACATATTCAGCGACTTGACAATCGACTTCGCTGATAAGTAACAGAAC
GTCGAACTCAATCTCGTGATTTCTTTCTATTTGATGTTCGACGAATTTCATTATCGCCTT
CTCCAACGAAGGGTTCAGCTCCGAGCAGAGGTACTTGTGCAATCCAAGTTTGACGGTGTA
GGCCGCGAACGTGACGTTATTGACGAGGGCGGATCTCAGGTCAGTCATTTCGCCGGGCTT
CAGTTCGCGACAGTTCTCGAAGATGTGTGACGTCACCAGGAAATCGATTATGGCGTCCCC
GAGGAACTCGAGGCGCTCGTACGAGCTCGTCAGCCTGTTCCGGATGTACGACGAGTGAGA
CAGAGCGTTTAGCAGGAAGGTTGAATCTTTGAACGTGTAGTTTAGGATCTTTTCGACATC
AGTTCTCGAATTGTTTAGTAAAAAGTCAATATCAGCTTCGGTAGCTAAATTCTTCGATAA
CGGTGTTTGCACCGGCTTGTGGAGCATGTCTGCAAAGTTATCCTGTGGCGGAAACACCTC
CATCCATTCAAGTAGTTTTACAGCTGCTAATATCCCTCCACTAAGTAGATATGTGCCGAT
CAGAGCTTCCACGGAATCGGCTATAGATTTGTCCGCAACTGCTTGTGAATGTACATAGCA
TTGCATAGAATTTTGGGCACAGCCTTCGGGTTCTGCCTCAGCGATGCCATTTTGGAAATT
ATTCATCACAGATTCCCAGCTTTCTTCACTTAATTCACCGGTCATTACTTCCTCTTCGGT
GAACTGTATGCCGATTAAGAATGTTGGACGAATTTGTCTTTGTTCAATAAATTCTTCCAA
TTTAGGGGGCGCAAAGAAACCTGGGACGAGGAAGTCACTTCTAGGGCTGAACTGCTCCAC
CTTCATGCGTCCACCCAAGTTGAATTTCGCACCAGCGTAATATAAATTCCTGTTACTGAT
CAGCTTGCCCTTGATGTTCGTTAGTTGACCCTCGTTCATGTTCGGAAACTTGTGGTGCAG
GTACAGGCTGGCGGCGAACTTCAAGAACGAGTCCCCCAGTGTCTCCGGTCGCTCCAGATC
GAAGGTGTCGTTTGAGTTGATCGTGGTGAGCGCGGCGAGCACGTCTCTCAGTTCCGGACC
TCGCCCGGTCGGCGTCTTCTTTAATATTTCGATTTTATCAACGTACTTGATGGGCGGCGG
TGCTATAGCTGGGGCCTTAGGAACGATTCTCGGCGGGGAACAAGGGTTGTTCGATGCAGA
CGATATCGGAGCCGACACAAACTCGTCGTAACATTCTATGTCCATTAACGTGATGGTCGA
CAAGTTACGCTCTACGTCGATGGGTTCGATTCGTTGATCCCAGGGGTACTCTTTGTCGAT
TTTCTTTCTTTGCAGTTTATATAAGCTCTTTTTTAACGGTACAACTTTCTTCAAACAATC
ATCTGTGCCTTTGTGTATTCTGTCAATAGTGTGGACATGAAGTGGTTCTTCAACTTGGGA
CAATAATGAATTTATGGCTATATACCGGTCCACTTGTATCGGTTGAAATGATTCCGTTTT
TTTCAAAATTGGTTGCCCGTATTTAGTGGCGTTTGATATTTCCACGAGCAATTCATGTGC
CACTAACAACATGTGAACTCTGTGAATAATACTGGGCAGTAGCGTTGCCTTATACCACAG
TACTCCTGGGTAATCGTATTTAATGCAGAATTCCGGTATAAATATCTCTGCAAATCCCTT
CGGTTTATCGTCGCCGAACGCAATCGATATCATCTTCAGCTGCTTGTCTGTGAACGCTTT
GAGCGTTGCTGCTCGGGGTAGGAGGCAGTTCATCCGCGTGCTTATGTTACGTACCTCCAA
CAGTGGTTGACTTTCACTTCCTAATATATCCAAGTTATAGTTGTTTGCATAATAATTTGC
ATACGATTCATAGCAGTCAGCATCGAATTGAGATTTCGGCGTCATGTATTCGAGAACCTT
CGTCACGACGTACCGTTCAGGTAGAATAGTCCCGCGATACCAGGGCGTTACAATGCAATT
CGTGTAGTTTTCTTCTGTGACTACCAGCGATTTTCTTTCCTCAACTGAAGGCGCGGCGAC
CGGTGGCACCGTGTGGTGAGTCTGCATTGTTGCCCAGTCAATGTTGTATCCATTATGTTC
CAGTACCGGGACAACGTACATGCAGTTTTTAGTTCCCTCGAATATCAGAAACTTCTTATT
GATCGCCAAGATTTGGTCGAATAGAAAATAATGGAATTGCTTCACTAGCTCGAATATAAT
CGGGGTCAGTTTTATAACTGCGTAATTGACTTCTATTGACGTGGTGATTTCTCCAACGGA
CGTGAACGCTGGGAACTCGCACAGTTTAGGCAAAGGCTTCTGCGTCAAAAACCCGTAGCA
TTCGTTTCTCTTTATAAAATCGTACAAAGCCTTTTCACGATTATCGTTGGGTTTCTCGAA
TGCCGCCTCCATTTTTATTACGTGAAGATAGAATACCGAACTATCTGGTACTGCGTCTAG
GTGTGACGGGAACTGTATTTTATGCTTTCGTTTTCGTTTCTTGGAACCAGGCTTGGGTAC
ATTCTCTTTGATCTCGGTCTCGCAATCTTTAGTCCAGTTCGGAAAGCAGCCACGTATGTC
ATCTCGTTCGTAATCAACTTCCGCGTATTTGTACGGGAGTAATGTTAACGGATGAAGTTC
GCCCAATTCATGTAGCTTAATGCACGCCTTCAGTGCAGCGGAGCGTTTAGCGGTTTTCGT
ATTTGAGTACGGGTCACCCTTAATTTCTTCTTTGACGGGGGATCCTATGGGAAGTATGAC
GGTGACCTGTTTTTTAGCTCCGTTTTCAACCACCTCTTGCAACCAAACCGGAGTGATCGT
TGTGAATTGATCGTGTGGTAAAATCGAGCAATACCGGCTTAGTAAACTAATTGCTGATAC
GGAATATAATATATTGCCATTAGACGTTTCGTATGGGGGAACCTCGTCGTCATCATACAA
GTTCTCATGAATGTCTTGAGTTGTGGGAGCGGCGCGGCTGTCATCGCCGACTATGAGATT
ACGAATACGTTCTTCGGTTTTTTGGAACGCGTCGTATTTTATTAAGAACGACTGTTTGTC
TTCAATATCAACGAGTATAACGAAACTGGCTTCAGAACTTCTTGCACGACCTTTGCTTTG
GATATAAGATCGATATTCGGTTGGCGCATCGTATCGGACAACTAACGCACACTGAGGTAT
GTCCAAGCCTTCTTCGATGACGCTCGTCGATATCAAACAGTTCAGGTCTCCGTTATTAAA
TCCCAAAATGGCTTTTTGGGATGATTTTTTTAAATAATGTTCTTCCCTTGTACTTTTAAA
AGGATTGATACTGAAGCCGACAACAAAATCATGTTTCAAAAATTCAAACTCGTCCGGTCT
AGCTTTTTTCAAGTCCATTAAGATATTATACAGAATCTTTGAAGTAAACCTTTGTTTCGT
GAAAATTATTCCACAGAGAGGTTTTCTTGAGTGGTTTACTTTCAACAATTCTCCAGGCTT
TTCCAATATCAAAGGGTTATATTCCTTCAGCAAGTCAATCAATTGTAAAATCTTTTCCGA
TGAATGTTTTATTATTTTATCGTACCCAGTCTCGTTTTCCATGGCGTCCAAGAGTATCAT
GCGAGCTTCTGTGGAATGGGTGATGACAGTTGAATACAACAAATTTTCCTCTTTTGTTGA
TGCTTTACGTTTTAATCTTTCTAACAAGACAATGTACGCCAGAATACCCAAAGATCCACC
ATACAAACCCATCTCTTCGAGATTTGTTATCATTCCTACTATAAGATTTTTTACCGCCTT
CACAATCTTGTTAGGGTCGTTCGAAATATCTCGTTGGCATGGTGTCTTTTTAAAATCTTT
TGATGGCAGAGAGACAGGCAACTTAACACTCATCACAAGATTTTGTAGCGTATTAAGTAA
ACTTATCGCTTCCTTAGCTGCTTCCGACATTTGAGGCTTCCTGAAGTACTGTATAAACTC
CTGGGGGTTGGTAGAGTAAGTCATAACTTCACCAAGATCATCAACAGTTGCGATGGTTGC
ATGAAACGTGTTTTCCAACTGCTTAAGTGTTTCCTCGATCTTAGATATTGATACATTCCC
ATTCAATAATGTCGCCGTTAAACCTAGAACTCTGGGCTGTTCGTGAGCTTTACAATTCAA
AAAGTGCTTCATTATAACTCTCATTGGATGGTCTTCCACAGCATGATGACATTCATCAAA
TATAATCAGATTAATATCCTCGATTCTTATATATGCATGTGTAAGCATGTCACTTAATAT
CTGAGAGGTCATTACAATTACCTGGTTTCGTGCCAATTCAGAGTCCCAATCGGCTTTCTT
CCAATAGTCTACCCCATCTTCGCTACTATAGGCACCAACACCGTCGACGGGACACATCAT
TTCAATTACATTTTTCTGTTGATTTACTAACGGAACTGTGTTTACAAGAAAGAAACTGCG
TTTCCCACCTTCTCCCCAAGGCTTTTTTAATTGGTTACGGAACTTTTTTATAAGCCTCTG
AGCAATAAAAGTTTTTCCAGAACCAGTAGGCAAATGAATTATTGTATTTTTTGAACTTGC
TATTTCTTCCAGTATTGCTTGATAGGGGCGAGCTTTCTGTTCGTGATACTGTATTCCTTC
TGTTGTAGTCATTTTACTTGTGCATGCAGAATTTGGAAGTTCGGTTACATACCAGCACTG
TCATAAAGTATGTTTAATAGTAAGCATTTAATTTTAATCTTAGCCGGTACGACTACGAAA
CCTTTCTAAGCTTAAAAAAATAAAATATAAACTTCAAGAGATTTCTTAGGTCACGTTCCT
CTTTGAATGTCTATGACTACAACTTTACTACGTACACCAAGCCTCAAAAAGTAAAGTAGG
GGAAGTACCTTATAGAGATAACACAATAATTT
(5372 bp)

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