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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70185_c0_seq7
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_ATP-binding_cassette_sub-family_G_member_5_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0007584 P response to nutrient
GO:0007588 P excretion
GO:0008152 P metabolic process
GO:0010212 P response to ionizing radiation
GO:0010949 P negative regulation of intestinal phytosterol absorption
GO:0015918 P sterol transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0030299 P intestinal cholesterol absorption
GO:0033344 P cholesterol efflux
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0043235 C receptor complex
GO:0045177 C apical part of cell
GO:0045796 P negative regulation of intestinal cholesterol absorption
GO:0046982 F protein heterodimerization activity
GO:0055085 P transmembrane transport
Transcript
Level		FPKM:9.04 TPM:15.77
ORF EntryO_BomoEE21395_complete:A_BomoEE_comp70185_c0_seq7
Sequence
(Nucleotide)
AATCCCTTAAAAAAAATCATACGTCAGTCAGTGGTGATTCCATAGATTTTTTACAAAATA
AAATAAATCAAGTTCCATTTACTCAATGTGTGAATAAATATATAAATGTCAATGTAGTTT
CAGGCGAACACATCAATTCTTTCTTGATTATTTGAACGAATGATTCAAAGAAGATAGCTA
CTTCTTTCATCCTTGAATACACAATTTTGTAAACACTACGTTACGCTGAGCTGTAAATCC
AGCACGCATTTTTTTAATAAGCGTGAACTACTACTAAAGGTAGATACTAAAATTTCTAAT
CATGGATAGCGACGAACTTGGAAATGACTTAGTGAGATTGGACAATGGATTTTTGGTAGC
GGATGACACATTTGTTGTCAATTCTGATGATGTGTTAGAAGATGAAAACAACTCGGACTC
TGGGAGTAAGAGCAATGCACCGCTAAGAGAACAGGATAGATTTTTACCAATCGCGAATAT
AGCTAAAATAATGAAACGGGCAATACCAGAGAATGGAAAGATAGCAAAAGATGCAAGGGA
ATGTGTTCAGGAATGTATATCAGAATTCATATCGTTTGTAACGAGCGAGGCTAGTGACAG
ATGCAAGGTTGAAAAACGCAAGACCATCAACGGGGAAGATGTATTGTTCGCATTGAATAC
CCTGGGATTTGATAACTACGTGAAACCTTTGCGTTTGTACTTGACAAAATATAGAGAAAT
TGTTATGTCACCAGCCTTATTTGCAGGTCACAATCAACAAATTGAACAAGACCATAGTTT
TATATAGCGAAGACGGCACGGCCTGTGTTTCAAACGAAAATGAAATCGATACACAAACTG
AATCCACCATTCTCTACGTCCCAACCACTTATCCAAAAGTCGTCGAAGAATTTATTCTTA
CATGATTAAGATTGTAGCGATATTAAAATATTCTTTATGAGAATGTGTGATCGTATTATG
TTGGTTTATTTTAAAATCGATCACAGTATTATTTTACTGAAGACAGAAAGGTTAAAAAAT
TAATTAAGAAGATTGTAGGGGATACATTGATCTCTTAGACAAAATATACAAAAGGATACA
TGAAACATGCTTGGAGGAACTTGGCATCCAATATTTTGAGAAGCATATAGAGACCAAAGT
CTTATTGAAACATTCGAGTTATTGTTTGTTACAAAGCTATTGAGATTCTGTTCGCTGACC
ATAACAAACTGACGTACTATGAGGAAATTCACTAAAACTAAGAGAATACTGCTATAAGAA
CAGGCTCGACAGATTCCACAAATCTCAAGAACCACATGCATCTGCTTATTAAGTTAAGAA
TATAAATAAGAATGTTAATCTAGGTACGGGATATCTGTTATAGCATAATTAGGATATAGG
TAAACTGAAAAAACAACTAGAATACAAAAATGTATTTGGTGTAAGTCGTACTAATCAATC
CGGAACGCACAACTGCCCTGCGGCAGAAATTGCCGGGGTGTTGGTGCTTACCGGGATACG
TTCAGTTCGTTCTACCCCCCAGCGATTTTATTCAGGTCATGAGCCATGACAAATACGAGT
TCGGTGACTCCGCATATCGATTCGAAATGATATCGTTATCGATTTTAAAATAAGTCTTTT
TGGAAAAAATAAATTATGATATAGCTGGTAGTTTGTGGTTAAATGTACTTTAGATTATGT
AATGTCAAAAATAAAATATTTTCAGTAATTTTTTTTTTATTTCGTACACTTCTTTTATTC
TGAATGCAATTATTTTTTAACAGTTTTTAAAAAATATATTTTTTAAATAGTATATTGTAT
CGTACACAAAATTAAAATCTATATAATTATTTGAAAAAAAAATATGTTTTATTCTCTGAA
TTTATCGGTTATGTAGCTAGGCAGAGGCATCAGATACAGGAATTTGTTGAAAATCATAAT
ACCGACGGAGAATGCAAACGACACGCCGAGATTGAAATTTAAATTGAAGTCTCCCGCTAA
GTTAATGTCCCCCGTGAAAGTTTTCGACGTGAATCGTTCAGTCAAGAATGCCTTCCCGCT
GGCGTATCTGCAGTTAGCGTTGGAATTCGTGTTTAAACTCGACGAGGTCTGAATGAGGCT
GGTGATGCCCGTGCAATTCTCGTGGTCGCTGTAGGGCAGAATGTTGAAGGTCGGTTGCTT
GAAGACGGTCCGGTGGAGGAAGATCGAGGCGTAACGTGTGTGCGTTATGTAAGTTAAGTA
GTGGAGCCAGTCTTCGAAGCCTTTGTAGGATCTTAACACTCCACTGGCGAGCATGACGTA
AATGCAAGTGATGTACAAGTTGACAATGGCGGCGTTCAGTCCGTTCTTAACGAATACCAT
GATCGCGATCGCTTGTTGTTCCGCGTAAATATACGACGACCACAGCACCAACGAGAAGTG
AATGTAGTCCAACGATTCCGAAATGTCGGCCAAGATCGGGTAAATAATTGCAGCCGAAGC
GAACGAAGTGATACATGAAAATGGCAACGAAACTATATTCCAAGACAGAAGTAAACTGGC
GCCGCTGTAATGTCCCTCCTGGGACTCTTCATAGTACCGAGTTCTGTAAGGACCGTAAAG
ACAAATCGTGTTCATAATGCTGACAAAATAAGTTCCGACCATTGCGTTGAAGATTAAACC
GCTTTTAGTAATGAAAGCCCGTTGATAATCCTTTGCCTCGTTGTAGAAAATCCAAAGTAT
GAAAAAATATATCGGTAAACAAAGAAGTCTCATAAACATTTGCTTGAATCCGTGTTTGTT
AAGATTGAATATTGTAGCTAGAGTCCGTAAGTACAACATCCACACTGTCTTAAATCCGCC
AGGCTTCCCATAGTTCATTTGTACTTTATTAGGGTTTACGATACGATTGTTTTCATGAAG
GTTCCCCTGCATGATGGCTTGCCCTTCGATCTTAAATTTCTCGACCAGCGCCGCGATCTG
GTGGTTTGATTCAATGAAGCGCTCCCGTGATCTCCTATCAACGGTGGAGAGGCACAGGTA
GTACATGAGCGGGTTTTCTAACTGTGGACACGGGAACCCGATGCTGCCGAAGTAGTCAAG
CAAGTTCCTCGTTGGTCCCGCGTATACTACATCCCCGAGGCATAGATACACCACCCGGTC
CAGGAATGGGAATACATCTGATCTAGGCTTTTCCATTGTGAGTATGATAGCGGTCCCGTA
TTTTTTAGCGGCATTCGATAATATTGAGATAACAAGATATGTGTTGAGAGGATCCAAATC
CCATGTCGGCTCATCCAGTAATAATATAATGGGATCACGAATCAATTGCACTCCAATAAC
TAGTCTTCTGTATTCGCTTTTGGTTAAATTTGTGACGCATTTGTTCGCAACCTGCGAGAG
AGCCATGTCAGCCATCACTTGTTTCACTTTCGATGACTTCAAATACCCTGAAATCTTAGT
AAGTGATAAGGCCAATGTCTGCTGAACGCTCAGTCCTGGCAGCAGTCTTGTCGAGTGTCG
AACCAAAGCGCAGTTGATGTTGAACTGTTCCTCTTCTAAGGGTACGCCTTCGAGTAGCAC
GTGGCCTTTTGACGGCACGCGACGAGCTATCACGTCTAGGAGGGCGCGTTTACCGCTACC
TTTAGATCCCAGTATGGCCGTGACTTCGCCGCTGTGTGTCGTGAAGGATACATCTTTAAG
GATCACTCCTGTCTTCACGCCTCCAGTGAGACGTTGGAAGAAGCTGCCTGGTTCCACCTG
TCCCGAATGGAAAACGTTGCACAGCTCCAAAGTATAATCGCCACCGATCATTTTTCATAC
AAAAAATTTAAAACAGAAATTTTTAATAAATAAAACAAGAATCCGTGGCAAAAACAATGA
TTAAAACATAACGATGCGACACGACTTTCACGTTACTAAAT
(3881 bp)

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