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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70185_c0_seq6
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_ATP-binding_cassette_sub-family_G_member_5_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0007584 P response to nutrient
GO:0007588 P excretion
GO:0008152 P metabolic process
GO:0010212 P response to ionizing radiation
GO:0010949 P negative regulation of intestinal phytosterol absorption
GO:0015918 P sterol transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0030299 P intestinal cholesterol absorption
GO:0033344 P cholesterol efflux
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0043235 C receptor complex
GO:0045177 C apical part of cell
GO:0045796 P negative regulation of intestinal cholesterol absorption
GO:0046982 F protein heterodimerization activity
GO:0055085 P transmembrane transport
Transcript
Level		FPKM:6.00 TPM:10.47
ORF EntryO_BomoEE21393_complete:A_BomoEE_comp70185_c0_seq6
Sequence
(Nucleotide)
AATCCCTTAAAAAAAATCATACGTCAGTCAGTGGTGATTCCATAGATTTTTTACAAAATA
AAATAAATCAAGTTCCATTTACTCAATGTGTGAATAAATATATAAATGTCAATGTAGTTT
CAGGCGAACACATCAATTCTTTCTTGATTATTTGAACGAATGATTCAAAGAAGATAGCTA
CTTCTTTCATCCTTGAATACACAATTTTGTAAACACTACGTTACGCTGAGCTGTAAATCC
AGCACGCATTTTTTTAATAAGCGTGAACTACTACTAAAGGTAGATACTAAAATTTCTAAT
CATGGATAGCGACGAACTTGGAAATGACTTAGTGAGATTGGACAATGGATTTTTGGTAGC
GGATGACACATTTGTTGTCAATTCTGATGATGTGTTAGAAGATGAAAACAACTCGGACTC
TGGGAGTAAGAGCAATGCACCGCTAAGAGAACAGGATAGATTTTTACCAATCGCGAATAT
AGCTAAAATAATGAAACGGGCAATACCAGAGAATGGAAAGATAGCAAAAGATGCAAGGGA
ATGTGTTCAGGAATGTATATCAGAATTCATATCGTTTGTAACGAGCGAGGCTAGTGACAG
ATGCAAGGTTGAAAAACGCAAGACCATCAACGGGGAAGATGTATTGTTCGCATTGAATAC
CCTGGGATTTGATAACTACGTGAAACCTTTGCGTTTGTACTTGACAAAATATAGAGAAAT
TGTTATGTCACCATGCAACTGCGAGCATGATCAGTACAACCTGCTAAATACGCCAGGCAA
ATTTAAAAGGTCACAATCAACAAATTGAACAAGACCATAGTTTTATATAGCGAAGACGGC
ACGGCCTGTGTTTCAAACGAAAATGAAATCGATACACAAACTGAATCCACCATTCTCTAC
GTCCCAACCACTTATCCAAAAGTCGTCGAAGAATTTATTCTTACATGATTAAGATTGTAG
CGATATTAAAATATTCTTTATGAGAATGTGTGATCGTATTATGTTGGTTTATTTTAAAAT
CGATCACAGTATTATTTTACTGAAGACAGAAAGGTTAAAAAATTAATTAAGAAGATTGTA
GGGGATACATTGATCTCTTAGACAAAATATACAAAAGGATACATGAAACATGCTTGGAGG
AACTTGGCATCCAATATTTTGAGAAGCATATAGAGACCAAAGTCTTATTGAAACATTCGA
GTTATTGTTTGTTACAAAGCTATTGAGATTCTGTTCGCTGACCATAACAAACTGACGTAC
TATGAGGAAATTCACTAAAACTAAGAGAATACTGCTATAAGAACAGGCTCGACAGATTCC
ACAAATCTCAAGAACCACATGCATCTGCTTATTAAGTTAAGAATATAAATAAGAATGTTA
ATCTAGGTACGGGATATCTGTTATAGCATAATTAGGATATAGGTAAACTGAAAAAACAAC
TAGAATACAAAAATGTATTTGGTGTAAGTCGTACTAATCAATCCGGAACGCACAACTGCC
CTGCGGCAGAAATTGCCGGGGTGTTGGTGCTTACCGGGATACGTTCAGTTCGTTCTACCC
CCCAGCGATTTTATTCAGGTCATGAGCCATGACAAATACGAGTTCGGTGACTCCGCATAT
CGATTCGAAATGATATCGTTATCGATTTTAAAATAAGTCTTTTTGGAAAAAATAAATTAT
GATATAGCTGGTAGTTTGTGGTTAAATGTACTTTAGATTATGTAATGTCAAAAATAAAAT
ATTTTCAGTAATTTTTTTTTTATTTCGTACACTTCTTTTATTCTGAATGCAATTATTTTT
TAACAGTTTTTAAAAAATATATTTTTTAAATAGTATATTGTATCGTACACAAAATTAAAA
TCTATATAATTATTTGAAAAAAAAATATGTTTTATTCTCTGAATTTATCGGTTATGTAGC
TAGGCAGAGGCATCAGATACAGGAATTTGTTGAAAATCATAATACCGACGGAGAATGCAA
ACGACACGCCGAGATTGAAATTTAAATTGAAGTCTCCCGCTAAGTTAATGTCCCCCGTGA
AAGTTTTCGACGTGAATCGTTCAGTCAAGAATGCCTTCCCGCTGGCGTATCTGCAGTTAG
CGTTGGAATTCGTGTTTAAACTCGACGAGGTCTGAATGAGGCTGGTGATGCCCGTGCAAT
TCTCGTGGTCGCTGTAGGGCAGAATGTTGAAGGTCGGTTGCTTGAAGACGGTCCGGTGGA
GGAAGATCGAGGCGTAACGTGTGTGCGTTATGTAAGTTAAGTAGTGGAGCCAGTCTTCGA
AGCCTTTGTAGGATCTTAACACTCCACTGGCGAGCATGACGTAAATGCAAGTGATGTACA
AGTTGACAATGGCGGCGTTCAGTCCGTTCTTAACGAATACCATGATCGCGATCGCTTGTT
GTTCCGCGTAAATATACGACGACCACAGCACCAACGAGAAGTGAATGTAGTCCAACGATT
CCGAAATGTCGGCCAAGATCGGGTAAATAATTGCAGCCGAAGCGAACGAAGTGATACATG
AAAATGGCAACGAAACTATATTCCAAGACAGAAGTAAACTGGCGCCGCTGTAATGTCCCT
CCTGGGACTCTTCATAGTACCGAGTTCTGTAAGGACCGTAAAGACAAATCGTGTTCATAA
TGCTGACAAAATAAGTTCCGACCATTGCGTTGAAGATTAAACCGCTTTTAGTAATGAAAG
CCCGTTGATAATCCTTTGCCTCGTTGTAGAAAATCCAAAGTATGAAAAAATATATCGGTA
AACAAAGAAGTCTCATAAACATTTGCTTGAATCCGTGTTTGTTAAGATTGAATATTGTAG
CTAGAGTCCGTAAGTACAACATCCACACTGTCTTAAATCCGCCAGGCTTCCCATAGTTCA
TTTGTACTTTATTAGGGTTTACGATACGATTGTTTTCATGAAGGTTCCCCTGCATGATGG
CTTGCCCTTCGATCTTAAATTTCTCGACCAGCGCCGCGATCTGGTGGTTTGATTCAATGA
AGCGCTCCCGTGATCTCCTATCAACGGTGGAGAGGCACAGGTAGTACATGAGCGGGTTTT
CTAACTGTGGACACGGGAACCCGATGCTGCCGAAGTAGTCAAGCAAGTTCCTCGTTGGTC
CCGCGTATACTACATCCCCGAGGCATAGATACACCACCCGGTCCAGGAATGGGAATACAT
CTGATCTAGGCTTTTCCATTGTGAGTATGATAGCGGTCCCGTATTTTTTAGCGGCATTCG
ATAATATTGAGATAACAAGATATGTGTTGAGAGGATCCAAATCCCATGTCGGCTCATCCA
GTAATAATATAATGGGATCACGAATCAATTGCACTCCAATAACTAGTCTTCTGTATTCGC
TTTTGGTTAAATTTGTGACGCATTTGTTCGCAACCTGCGAGAGAGCCATGTCAGCCATCA
CTTGTTTCACTTTCGATGACTTCAAATACCCTGAAATCTTAGTAAGTGATAAGGCCAATG
TCTGCTGAACGCTCAGTCCTGGCAGCAGTCTTGTCGAGTGTCGAACCAAAGCGCAGTTGA
TGTTGAACTGTTCCTCTTCTAAGGGTACGCCTTCGAGTAGCACGTGGCCTTTTGACGGCA
CGCGACGAGCTATCACGTCTAGGAGGGCGCGTTTACCGCTACCTTTAGATCCCAGTATGG
CCGTGACTTCGCCGCTGTGTGTCGTGAAGGATACATCTTTAAGGATCACTCCTGTCTTCA
CGCCTCCAGTGAGACGTTGGAAGAAGCTGCCTGGTTCCACCTGTCCCGAATGGAAAACGT
TGCACAGCTCCAAAGTATAATCGCCACCGATCATTTTTCATACAAAAAATTTAAAACAGA
AATTTTTAATAAATAAAACAAGAATCCGTGGCAAAAACAATGATTAAAACATAACGATGC
GACACGACTTTCACGTTACTAAAT
(3924 bp)

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