SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70185_c0_seq3
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_ATP-binding_cassette_sub-family_G_member_5_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0007584 P response to nutrient
GO:0007588 P excretion
GO:0008152 P metabolic process
GO:0010212 P response to ionizing radiation
GO:0010949 P negative regulation of intestinal phytosterol absorption
GO:0015918 P sterol transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0030299 P intestinal cholesterol absorption
GO:0033344 P cholesterol efflux
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0043235 C receptor complex
GO:0045177 C apical part of cell
GO:0045796 P negative regulation of intestinal cholesterol absorption
GO:0046982 F protein heterodimerization activity
GO:0055085 P transmembrane transport
Transcript
Level		FPKM:0.13 TPM:0.22
ORF EntryO_BomoEE21388_complete:A_BomoEE_comp70185_c0_seq3
Sequence
(Nucleotide)
AATCCCTTAAAAAAAATCATACGTCAGTCAGTGGTGATTCCATAGATTTTTTACAAAATA
AAATAAATCAAGTTCCATTTACTCAATGTGTGAATAAATATATAAATGTCAATGTAGTTT
CAGGCGAACACATCAATTCTTTCTTGATTATTTGAACGAATGATTCAAAGAAGATAGCTA
CTTCTTTCATCCTTGAATACACAATTTTGTAAACACTACGTTACGCTGAGCTGTAAATCC
AGCACGCATTTTTTTAATAAGCGTGAACTACTACTAAAGAAGATGAAAACAACTCGGACT
CTGGGAGTAAGAGCAATGCACCGCTAAGAGAACAGGATAGATTTTTACCAATCGCGAATA
TAGCTAAAATAATGAAACGGGCAATACCAGAGAATGGAAAGATAGCAAAAGATGCAAGGG
AATGTGTTCAGGAATGTATATCAGAATTCATATCGTTTGTAACGAGCGAGGCTAGTGACA
GATGCAAGGTTGAAAAACGCAAGACCATCAACGGGGAAGATGTATTGTTCGCATTGAATA
CCCTGGGATTTGATAACTACGTGAAACCTTTGCGTTTGTACTTGACAAAATATAGAGAAA
TTGTTATGTCACCAGTAAGTATTAACTTTACGGTAACAGCAATTGTAGTGTGCCTTATAT
TTAAAATAAATAATAGAATTCAAGTATGGGAACAAACAGCTGTTTACTTTTCCACCTAAT
GTATCAAATAGGTTGTATTGATTATAATTGCAGGTGACCTGAAATTTGCATTCACTCTGT
TTCTGACGATAAAGAATATTTTTCTATCGTCAATATTAATATATGTTCGCAAATTTCAGT
GCAACTGCGAGCATGATCAGTACAACCTGCTAAATACGCCAGGCAAATTTAAAAGGTCAC
AATCAACAAATTGAACAAGACCATAGTTTTATATAGCGAAGACGGCACGGCCTGTGTTTC
AAACGAAAATGAAATCGATACACAAACTGAATCCACCATTCTCTACGTCCCAACCACTTA
TCCAAAAGTCGTCGAAGAATTTATTCTTACATGATTAAGATTGTAGCGATATTAAAATAT
TCTTTATGAGAATGTGTGATCGTATTATGTTGGTTTATTTTAAAATCGATCACAGTATTA
TTTTACTGAAGACAGAAAGGTTAAAAAATTAATTAAGAAGATTGTAGGGGATACATTGAT
CTCTTAGACAAAATATACAAAAGGATACATGAAACATGCTTGGAGGAACTTGGCATCCAA
TATTTTGAGAAGCATATAGAGACCAAAGTCTTATTGAAACATTCGAGTTATTGTTTGTTA
CAAAGCTATTGAGATTCTGTTCGCTGACCATAACAAACTGACGTACTATGAGGAAATTCA
CTAAAACTAAGAGAATACTGCTATAAGAACAGGCTCGACAGATTCCACAAATCTCAAGAA
CCACATGCATCTGCTTATTAAGTTAAGAATATAAATAAGAATGTTAATCTAGGTACGGGA
TATCTGTTATAGCATAATTAGGATATAGGTAAACTGAAAAAACAACTAGAATACAAAAAT
GTATTTGGTGTAAGTCGTACTAATCAATCCGGAACGCACAACTGCCCTGCGGCAGAAATT
GCCGGGGTGTTGGTGCTTACCGGGATACGTTCAGTTCGTTCTACCCCCCAGCGATTTTAT
TCAGGTCATGAGCCATGACAAATACGAGTTCGGTGACTCCGCATATCGATTCGAAATGAT
ATCGTTATCGATTTTAAAATAAGTCTTTTTGGAAAAAATAAATTATGATATAGCTGGTAG
TTTGTGGTTAAATGTACTTTAGATTATGTAATGTCAAAAATAAAATATTTTCAGTAATTT
TTTTTTTATTTCGTACACTTCTTTTATTCTGAATGCAATTATTTTTTAACAGTTTTTAAA
AAATATATTTTTTAAATAGTATATTGTATCGTACACAAAATTAAAATCTATATAATTATT
TGAAAAAAAAATATGTTTTATTCTCTGAATTTATCGGTTATGTAGCTAGGCAGAGGCATC
AGATACAGGAATTTGTTGAAAATCATAATACCGACGGAGAATGCAAACGACACGCCGAGA
TTGAAATTTAAATTGAAGTCTCCCGCTAAGTTAATGTCCCCCGTGAAAGTTTTCGACGTG
AATCGTTCAGTCAAGAATGCCTTCCCGCTGGCGTATCTGCAGTTAGCGTTGGAATTCGTG
TTTAAACTCGACGAGGTCTGAATGAGGCTGGTGATGCCCGTGCAATTCTCGTGGTCGCTG
TAGGGCAGAATGTTGAAGGTCGGTTGCTTGAAGACGGTCCGGTGGAGGAAGATCGAGGCG
TAACGTGTGTGCGTTATGTAAGTTAAGTAGTGGAGCCAGTCTTCGAAGCCTTTGTAGGAT
CTTAACACTCCACTGGCGAGCATGACGTAAATGCAAGTGATGTACAAGTTGACAATGGCG
GCGTTCAGTCCGTTCTTAACGAATACCATGATCGCGATCGCTTGTTGTTCCGCGTAAATA
TACGACGACCACAGCACCAACGAGAAGTGAATGTAGTCCAACGATTCCGAAATGTCGGCC
AAGATCGGGTAAATAATTGCAGCCGAAGCGAACGAAGTGATACATGAAAATGGCAACGAA
ACTATATTCCAAGACAGAAGTAAACTGGCGCCGCTGTAATGTCCCTCCTGGGACTCTTCA
TAGTACCGAGTTCTGTAAGGACCGTAAAGACAAATCGTGTTCATAATGCTGACAAAATAA
GTTCCGACCATTGCGTTGAAGATTAAACCGCTTTTAGTAATGAAAGCCCGTTGATAATCC
TTTGCCTCGTTGTAGAAAATCCAAAGTATGAAAAAATATATCGGTAAACAAAGAAGTCTC
ATAAACATTTGCTTGAATCCGTGTTTGTTAAGATTGAATATTGTAGCTAGAGTCCGTAAG
TACAACATCCACACTGTCTTAAATCCGCCAGGCTTCCCATAGTTCATTTGTACTTTATTA
GGGTTTACGATACGATTGTTTTCATGAAGGTTCCCCTGCATGATGGCTTGCCCTTCGATC
TTAAATTTCTCGACCAGCGCCGCGATCTGGTGGTTTGATTCAATGAAGCGCTCCCGTGAT
CTCCTATCAACGGTGGAGAGGCACAGGTAGTACATGAGCGGGTTTTCTAACTGTGGACAC
GGGAACCCGATGCTGCCGAAGTAGTCAAGCAAGTTCCTCGTTGGTCCCGCGTATACTACA
TCCCCGAGGCATAGATACACCACCCGGTCCAGGAATGGGAATACATCTGATCTAGGCTTT
TCCATTGTGAGTATGATAGCGGTCCCGTATTTTTTAGCGGCATTCGATAATATTGAGATA
ACAAGATATGTGTTGAGAGGATCCAAATCCCATGTCGGCTCATCCAGTAATAATATAATG
GGATCACGAATCAATTGCACTCCAATAACTAGTCTTCTGTATTCGCTTTTGGTTAAATTT
GTGACGCATTTGTTCGCAACCTGCGAGAGAGCCATGTCAGCCATCACTTGTTTCACTTTC
GATGACTTCAAATACCCTGAAATCTTAGTAAGTGATAAGGCCAATGTCTGCTGAACGCTC
AGTCCTGGCAGCAGTCTTGTCGAGTGTCGAACCAAAGCGCAGTTGATGTTGAACTGTTCC
TCTTCTAAGGGTACGCCTTCGAGTAGCACGTGGCCTTTTGACGGCACGCGACGAGCTATC
ACGTCTAGGAGGGCGCGTTTACCGCTACCTTTAGATCCCAGTATGGCCGTGACTTCGCCG
CTGTGTGTCGTGAAGGATACATCTTTAAGGATCACTCCTGTCTTCACGCCTCCAGTGAGA
CGTTGGAAGAAGCTGCCTGGTTCCACCTGTCCCGAATGGAAAACGTTGCACAGCTCCAAA
GTATAATCGCCACCGATCATTTTTCATACAAAAAATTTAAAACAGAAATTTTTAATAAAT
AAAACAAGAATCCGTGGCAAAAACAATGATTAAAACATAACGATGCGACACGACTTTCAC
GTTACTAAAT
(4030 bp)

- SilkBase 1999-2023 -