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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70185_c0_seq1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_ATP-binding_cassette_sub-family_G_member_5_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0007584 P response to nutrient
GO:0007588 P excretion
GO:0008152 P metabolic process
GO:0010212 P response to ionizing radiation
GO:0010949 P negative regulation of intestinal phytosterol absorption
GO:0015918 P sterol transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0030299 P intestinal cholesterol absorption
GO:0033344 P cholesterol efflux
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0043235 C receptor complex
GO:0045177 C apical part of cell
GO:0045796 P negative regulation of intestinal cholesterol absorption
GO:0046982 F protein heterodimerization activity
GO:0055085 P transmembrane transport
Transcript
Level		FPKM:3.27 TPM:5.71
ORF EntryO_BomoEE21384_complete:A_BomoEE_comp70185_c0_seq1
Sequence
(Nucleotide)
AATCCCTTAAAAAAAATCATACGTCAGTCAGTGGTGATTCCATAGATTTTTTACAAAATA
AAATAAATCAAGTTCCATTTACTCAATGTGTGAATAAATATATAAATGTCAATGTAGTTT
CAGGCGAACACATCAATTCTTTCTTGATTATTTGAACGAATGATTCAAAGAAGATAGCTA
CTTCTTTCATCCTTGAATACACAATTTTGTAAACACTACGTTACGCTGAGCTGTAAATCC
AGCACGCATTTTTTTAATAAGCGTGAACTACTACTAAAGAAGATGAAAACAACTCGGACT
CTGGGAGTAAGAGCAATGCACCGCTAAGAGAACAGGATAGATTTTTACCAATCGCGAATA
TAGCTAAAATAATGAAACGGGCAATACCAGAGAATGGAAAGATAGCAAAAGATGCAAGGG
AATGTGTTCAGGAATGTATATCAGAATTCATATCGTTTGTAACGAGCGAGGCTAGTGACA
GATGCAAGGTTGAAAAACGCAAGACCATCAACGGGGAAGATGTATTGTTCGCATTGAATA
CCCTGGGATTTGATAACTACGTGAAACCTTTGCGTTTGTACTTGACAAAATATAGAGAAA
TTGTTATGTCACCAGCCTTATTTGCAGGTCACAATCAACAAATTGAACAAGACCATAGTT
TTATATAGCGAAGACGGCACGGCCTGTGTTTCAAACGAAAATGAAATCGATACACAAACT
GAATCCACCATTCTCTACGTCCCAACCACTTATCCAAAAGTCGTCGAAGAATTTATTCTT
ACATGATTAAGATTGTAGCGATATTAAAATATTCTTTATGAGAATGTGTGATCGTATTAT
GTTGGTTTATTTTAAAATCGATCACAGTATTATTTTACTGAAGACAGAAAGGTTAAAAAA
TTAATTAAGAAGATTGTAGGGGATACATTGATCTCTTAGACAAAATATACAAAAGGATAC
ATGAAACATGCTTGGAGGAACTTGGCATCCAATATTTTGAGAAGCATATAGAGACCAAAG
TCTTATTGAAACATTCGAGTTATTGTTTGTTACAAAGCTATTGAGATTCTGTTCGCTGAC
CATAACAAACTGACGTACTATGAGGAAATTCACTAAAACTAAGAGAATACTGCTATAAGA
ACAGGCTCGACAGATTCCACAAATCTCAAGAACCACATGCATCTGCTTATTAAGTTAAGA
ATATAAATAAGAATGTTAATCTAGGTACGGGATATCTGTTATAGCATAATTAGGATATAG
GTAAACTGAAAAAACAACTAGAATACAAAAATGTATTTGGTGTAAGTCGTACTAATCAAT
CCGGAACGCACAACTGCCCTGCGGCAGAAATTGCCGGGGTGTTGGTGCTTACCGGGATAC
GTTCAGTTCGTTCTACCCCCCAGCGATTTTATTCAGGTCATGAGCCATGACAAATACGAG
TTCGGTGACTCCGCATATCGATTCGAAATGATATCGTTATCGATTTTAAAATAAGTCTTT
TTGGAAAAAATAAATTATGATATAGCTGGTAGTTTGTGGTTAAATGTACTTTAGATTATG
TAATGTCAAAAATAAAATATTTTCAGTAATTTTTTTTTTATTTCGTACACTTCTTTTATT
CTGAATGCAATTATTTTTTAACAGTTTTTAAAAAATATATTTTTTAAATAGTATATTGTA
TCGTACACAAAATTAAAATCTATATAATTATTTGAAAAAAAAATATGTTTTATTCTCTGA
ATTTATCGGTTATGTAGCTAGGCAGAGGCATCAGATACAGGAATTTGTTGAAAATCATAA
TACCGACGGAGAATGCAAACGACACGCCGAGATTGAAATTTAAATTGAAGTCTCCCGCTA
AGTTAATGTCCCCCGTGAAAGTTTTCGACGTGAATCGTTCAGTCAAGAATGCCTTCCCGC
TGGCGTATCTGCAGTTAGCGTTGGAATTCGTGTTTAAACTCGACGAGGTCTGAATGAGGC
TGGTGATGCCCGTGCAATTCTCGTGGTCGCTGTAGGGCAGAATGTTGAAGGTCGGTTGCT
TGAAGACGGTCCGGTGGAGGAAGATCGAGGCGTAACGTGTGTGCGTTATGTAAGTTAAGT
AGTGGAGCCAGTCTTCGAAGCCTTTGTAGGATCTTAACACTCCACTGGCGAGCATGACGT
AAATGCAAGTGATGTACAAGTTGACAATGGCGGCGTTCAGTCCGTTCTTAACGAATACCA
TGATCGCGATCGCTTGTTGTTCCGCGTAAATATACGACGACCACAGCACCAACGAGAAGT
GAATGTAGTCCAACGATTCCGAAATGTCGGCCAAGATCGGGTAAATAATTGCAGCCGAAG
CGAACGAAGTGATACATGAAAATGGCAACGAAACTATATTCCAAGACAGAAGTAAACTGG
CGCCGCTGTAATGTCCCTCCTGGGACTCTTCATAGTACCGAGTTCTGTAAGGACCGTAAA
GACAAATCGTGTTCATAATGCTGACAAAATAAGTTCCGACCATTGCGTTGAAGATTAAAC
CGCTTTTAGTAATGAAAGCCCGTTGATAATCCTTTGCCTCGTTGTAGAAAATCCAAAGTA
TGAAAAAATATATCGGTAAACAAAGAAGTCTCATAAACATTTGCTTGAATCCGTGTTTGT
TAAGATTGAATATTGTAGCTAGAGTCCGTAAGTACAACATCCACACTGTCTTAAATCCGC
CAGGCTTCCCATAGTTCATTTGTACTTTATTAGGGTTTACGATACGATTGTTTTCATGAA
GGTTCCCCTGCATGATGGCTTGCCCTTCGATCTTAAATTTCTCGACCAGCGCCGCGATCT
GGTGGTTTGATTCAATGAAGCGCTCCCGTGATCTCCTATCAACGGTGGAGAGGCACAGGT
AGTACATGAGCGGGTTTTCTAACTGTGGACACGGGAACCCGATGCTGCCGAAGTAGTCAA
GCAAGTTCCTCGTTGGTCCCGCGTATACTACATCCCCGAGGCATAGATACACCACCCGGT
CCAGGAATGGGAATACATCTGATCTAGGCTTTTCCATTGTGAGTATGATAGCGGTCCCGT
ATTTTTTAGCGGCATTCGATAATATTGAGATAACAAGATATGTGTTGAGAGGATCCAAAT
CCCATGTCGGCTCATCCAGTAATAATATAATGGGATCACGAATCAATTGCACTCCAATAA
CTAGTCTTCTGTATTCGCTTTTGGTTAAATTTGTGACGCATTTGTTCGCAACCTGCGAGA
GAGCCATGTCAGCCATCACTTGTTTCACTTTCGATGACTTCAAATACCCTGAAATCTTAG
TAAGTGATAAGGCCAATGTCTGCTGAACGCTCAGTCCTGGCAGCAGTCTTGTCGAGTGTC
GAACCAAAGCGCAGTTGATGTTGAACTGTTCCTCTTCTAAGGGTACGCCTTCGAGTAGCA
CGTGGCCTTTTGACGGCACGCGACGAGCTATCACGTCTAGGAGGGCGCGTTTACCGCTAC
CTTTAGATCCCAGTATGGCCGTGACTTCGCCGCTGTGTGTCGTGAAGGATACATCTTTAA
GGATCACTCCTGTCTTCACGCCTCCAGTGAGACGTTGGAAGAAGCTGCCTGGTTCCACCT
GTCCCGAATGGAAAACGTTGCACAGCTCCAAAGTATAATCGCCACCGATCATTTTTCATA
CAAAAAATTTAAAACAGAAATTTTTAATAAATAAAACAAGAATCCGTGGCAAAAACAATG
ATTAAAACATAACGATGCGACACGACTTTCACGTTACTAAAT
(3762 bp)

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