SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70138_c0_seq5
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_LIM/homeobox_protein_Lhx1_isoform_X2_[Papilio_xuthus]
Ontology
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007267 P cell-cell signaling
GO:0008270 F zinc ion binding
GO:0021527 P spinal cord association neuron differentiation
GO:0021549 P cerebellum development
GO:0021702 P cerebellar Purkinje cell differentiation
GO:0021766 P hippocampus development
GO:0021846 P cell proliferation in forebrain
GO:0021879 P forebrain neuron differentiation
GO:0021937 P cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation
GO:0042127 P regulation of cell population proliferation
GO:0043565 F sequence-specific DNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.10 TPM:0.18
ORF EntryO_BomoEE21246_complete:A_BomoEE_comp70138_c0_seq5
Sequence
(Nucleotide)
CAAAAGGTCCTACCACCAGTAAAAGGTTTGCTTTTTAAATTATTAATTCTTTTTACTTAA
TCAAAAACGTTATGTAAGATACATTACGTTTTGAAAAATGAAAATATTTTTACTGTTTTA
ATCGATAATCACGCTGCCTTTGGAAAATACTTGAGTTACCAATGAAAGAAGTGGCCAGCT
AAAACATTGAAGTGAAAAAAAAATACAAACAAAAAAACTAGAACGTCTCACATAATATTT
TATAAACATTTAAATACTTAATTTTACATTTTAATCATATTTTAATACATTATATAATTA
TTAATAGTATCCATAATATTTACAAATCGGAATTATATATACAAATAAAAGTACTAATGT
TTTCCGCTACAACAAGTAAATACACCTTAAACGCGATAATGTTTAACTTTACTAATAAAT
AAAAATGTGATAAAAGTGAAGCTGTTATCTTAAAATAGGAACCAAATTATTGATATTAAC
TTAACGATTTGCAATAAACCCAAGAATAAATAAGTACGATTTATTTTTATGCTACTTATA
ATAAATTATTTCATTTGTAAAATGTCTTAGCTCTGTACAAATATTCTTATACATATATCC
ACAGTTTACTTAACAATACATTATTAAGTATTGATGAACTCATATACTAACCAAGCGATA
ATCACAAAATGCTTAAAGAATAACAACGGGTGGAAGAATGAAACTGATTATTTTGCAATT
TTTCTTCTATAGTTGTACACAACGAAACGACAATACACAAAACTGAATAGTTTACATAAT
ACACAAAAAAATATGCCTTAAATGAAGTAAAATTTCATCTATAAACACTCACGTTTCACT
AAAATCACATAAACACTGCGTTTTCTCGACATTATAATCGTCACGACACACAGCAAAATT
CAAAAGTCCACTTCGTAGCCAGACGAGCCGCATCAGTCGTGGAAGTCCCGCGGCTCCGGC
TTCAGCTACCACACCAGACCCTCGGGGTGCAGGGGCGGAGGCCCGTCTCCGAAGGTGAAC
TCCGGGGACGAGGGTCGCGGAAGCACCAGGTGGTCCGGGGGTGGAAACTGCTCGGGAAAC
TCGCCACCCGGCACTCCCTCCATGCCCCCTGGCTGATTGAAGGGCATCGTCGGCGGCGGA
TGGAAGAATGGCGCATCATGGTGGAACGGCGGGCCATAGCCAAACTCGAACTTGCCATCT
GCTGTCGCGAAGTACGGAAACCCCGGCGGACCTTCCTCCAAGCCCCCCGGTGATAAGTTC
ATTGGGAAACCACGCATTTTACGCGAAGACCCGAAGAAAGGTCCCCTGCCCATCGACGTG
AGTTGCTTTAGTCGACGCTCTTTTGAACGTTTGTTTTGGAACCAAACCTGTATGACTCGC
ATCGGTAGACCGGTCTCCTTAGCGAGCTGCTCTCGTATGTGCCGCGTGGGCTTCGGTGTT
TGTGAGAAAGCCGACTTCAGTATTTCGAGCTGTTTCGCCTTGATCGTGGTCCGGGGACCC
CTTCTCTTCGAGCCTCCGTTGCCGTCGTCCGGCGACTTGTTCTCGGCCTGTGAGTCTCGA
GTCTCGGGGTCACCGTCCAGGGAGCCCTGGTCTTCGGAGTCTTCATGTGGCTTTGTATCT
CCGTTGTGCGACAGCTCGGAGTGGAGAGCCGGGTGGGGCGCGTGCGCTGGACTACTCGAA
TTATTGGCTGCTCTTGACTCATCCTCTTCTTCTTCATCAGAACCCGATCCTAGTAAAGAG
TCCGGGTGCTGGGTCGGCGCCTTTCCCGCGAGGTAATCCTCTTTGCATATAAACTTGTTG
TCGTCGAGAACGTACAGCTCCTCTCCGGTAGACAGCTGCTTCCTGCACACGAGACAGGTG
AAGCAGTTGAGGTGGAAGACCTTCTCCCGAGCCTTCCTAACCAGGTCCGATGGTGAGATC
CCGTGACCGCAGCCGCTGCATTTCGTTCCGTAACGCCTAAAAAAATCATTCCGGCAGAAT
AGTTTATTGTCCCTAGAGTAGCATTTATCTGAGAGCGGGGCTCTGCAGTCGGCGCATCTG
ACGCAAGCGGCGTGCCAGGCCCTCTCCAGCACGTGCAGGAGGAATTTGTCCAGGATCGGC
TTCTCGCAGCCGGCGCACGCCATCGCGCCGCCTGCCTCACCTCGTCCTGGGAAATACATT
TTACCAATGTGGTGCTGGTGGAAGGGGGCATGGGCCCCCCGTCCTGCGGCTAGGAAACCC
GCCACTTCGGCACCTCTACACGGCACTTCACTTGACACAGCGCGGCGATTTCGCACGCCG
TCACCGGCAATACACCGAAACGCGCGACTTCTAA
(2314 bp)

- SilkBase 1999-2023 -