SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70135_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		nicotinic_acetylcholine_receptor_alpha_7_subunit_variant_2_[Chilo_suppressalis]
Ontology
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0005886 C plasma membrane
GO:0005892 C acetylcholine-gated channel complex
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007165 P signal transduction
GO:0007271 P synaptic transmission, cholinergic
GO:0015464 F acetylcholine receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0034220 P ion transmembrane transport
GO:0042166 F acetylcholine binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0098655 P cation transmembrane transport
GO:0099565 P chemical synaptic transmission, postsynaptic
Transcript
Level		FPKM:0.55 TPM:0.96
ORF EntryO_BomoEE21226_5prime_partial:A_BomoEE_comp70135_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTTCGATCCATTCGTTTATATTTAATAAAGAAACTTCGGCGTTCAGAGCATTAA
ATTAACAATTTAACAAAACTCTAGGACGATTTAACAAATATCGTCCATTGTCGACGGAAA
GGTTCCGCGTTCGAGTTTTTTTATGAAATTTATCGGAAACGGTGACCATCACGGCGGCAC
CCCCCGTCAGGGTCGTCACACAACCGTTATCAACTTGTTAGTGAGATAATGAAAACGATA
CAAAAAAACGAATACAAACATTGTCACGTAATCCTTGTCGTTCCGCAACTTCCTAGTTAG
AGCGCCACAGATTACTTTGTTACCTCAAAAAAGGAAAACATGACGAAACCTTGCGAGGAT
ACAGCATTTCACTTAATGTATCCGCGCATTTGTCTCGTTGGACGTTGTCCTTTTGGGAGG
TTTACAATGTTGTGCAGAAGTCATTTCGCACGAACTTGAAACATAATTATTTTACGCAAA
CAAAATATATAAATCGTTATTAATTGTAATTTTTTTTGGAATAAGGTAACTGATGAACGG
TGGAAGATAAAATATGTCAATATAATTTTATCATACATGTAAATTGTGTTGATTCATGTT
GTATAAATTAATTATAAACAAGTATAACCATCGTTTGTAAATGGAACAGGAAAACGATTT
TTTTTTACTTTTCCAATTTATGGAACCGTTTGTCTTTAATCGATTGATTCTCTGTAAATA
CTGTTTAGAATAAATTTTAGGTATTCATAGAACGGTAAACCTTATTTCAATTTTTACATA
AGAGGGGGCAAGTTAAAAAAACCGCTATTAATGCATAATGAATCGCTGTTGTTTAATGTA
ATTCAGTACAAACTTGTTATAACTATTTTATAAGGTGACTTGTAAAAGTTGTTTCGAAAG
ACACAAGTATGTCTTTATTAAATAATATTTTGTTTAACTACAACTTTTTAACGAACTTTT
AATTAAGCTATAACTTTGGATATTTTACCATTAACAACAACATCCACCCGTTCACAACGA
GGCATATCACAACCAGTACCAATTGAATCAACATTGTTTGTAAAGTTCTACACTAGCTAA
TGACACAAATACTTCTGAAAATAAACTCAGGGATCATAATCACGATTCACGGAATCGCAC
AGGAAGAAAAAAGAGCTGTTTCAAAGTTGAAACTGATCGAAGATATACTAACAAATATTA
TTTCAATATGCGAAAAAGATTGTTCAACAGTTTGAAGGAAGACGTTATTTGTGCTTTCAT
TGATTTCGAAAATTTCGTTTTCGGTTCATTCAATAAACTGACAGCCGACCTTTATTCCGA
TTAATTATAATGAATTTGCATACCATGGTCCGCTATGTGCCCGATCATGAATTCTCTCAA
AAATCTTAAGTTTCCGTAGTAAAAAAGACTACTATTGAATGTCATTAATAGAAGTTCTGT
TCTATTAGGTAAACGTGACGACCGTTGGTCACGACTCCCAAGAAGACCTAGAGTCGATGA
GGATTTGAAGGGATCAAGACAAGAAAACGTTTGATTTGAGTATAGAAGAATGGCAGTCGG
CGGTAACTTATTTTCTAGATGGGAGCGCGGGCGACGAGGCCGGCGGTGATGCGGCGTCCT
CAGCGTCCGCGCCGTTCGCTCATCACAACTTAACGTGTATTCGTGGTATCACAGAACGTT
TCGCATGCGTATCCGCAGGCGGGCGGGTCGCTACGACACCATGATGTGCGGCGCGGACAG
CAGCACGGCTAGCGTGGCGATGATTGTGAACAGGGTAAAGATAATAAGGCACAGTCTGTC
CACGACCATGGCGGCAAATTTCCAGTCGCGCGATATGTCCGCATCTTCGTCATCTTTGCG
CATCTGATCTGTGATGACTCGGATTTCCTTCAATATGAGCGACAGCTCGTAGTCGACACC
GAAACAGCTGTGCGCCGCTAAGCCTGCTCCATTTTCTTCGCCCCCCCTGTAGTAGCGGCA
GCAGGGCGGCTGCTGCGATTGCGCGTGCCGGAAGTCGTCGTCGATGTCGAGCACGTTAGC
GAGGAGTGACTTGGAGGAGCGCTCACGTAGCTCCAGGTCGGGAGGGGGGGGCGCTCGAGC
CGGCGGCGGCGTCGTCGCCGAACCCGGCCTTGACATACGCAGGATCCAAGGCAACCAGTA
CAGAAACACACACCGGATCCAGTCACTCATTTCATGCGTGTCTGCATGTCTGTGGTGATA
ATTCAGGATGAGTATAGTGGAGACCACGGAAGAGGCGACCATGAACATGATGCAGTTGAA
GTAAGTACCGAGCAGAGGCACAGCATCTGATGTTGCGGGCATCGTTTCGGCCACCATGTT
CAGAAACACCGTCAACGACAATAGAATTGTGACACCTAAAGATAGCTTT
(2389 bp)

- SilkBase 1999-2023 -