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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70122_c0_seq7
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		putative_splicing_factor_pTSR1_[Danaus_plexippus]
Ontology
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:0.07 TPM:0.12
ORF EntryO_BomoEE21199_complete:A_BomoEE_comp70122_c0_seq7
Sequence
(Nucleotide)
GTACGTTCATGTGGGTTGTAATTTTATGTTATTTCATTTTAATTTAATTTAATTTCTACC
GATTAGACTCGGTCTATTGGAAAAAAGAAAATTTCATTGTATGGGCTTTATTCCTTTCGC
CTGTCAAAGTGAGCGCAAGAAAAATATCTTTATGGATACCACCATTTTGATTTTGCCATT
TGCCAAATTATGGGAATCGTAGACAGCGCCAGTGAAAAGAATAGTAGAAATTAGGTTGAA
ATCTTTGGATTTCACTACTGATCAGATTTATTCTATCAACTTCTGCTGTCTGATTATCTG
TAAAACATTCACAAAAGGCATTAGACTTGAAAATGTCAGCACACGAGCAAATGAGGGCTA
TGCTAGATCAGCTTATGGGCACAGCTCGAAATGGTGAAAGTGACAGACATGGGGTAAAAT
TTTACGATGATTCTGTATGCAAATCATTTTTGTTGCAATGTTGTCCACATGAAATACTGT
CATCCACCGTAAGTGATTGAGTTTTGATAAAATATAGTATTGGGTTTAGATCACATGTTT
TAAGGTCTTAATATAATAAAAGTTTAAAATCAATAACGTCAAAATAAGTAAACAAATTTA
AACAAATAGTTGACATTCAGTGCCGGCCTTAAATACCATAGTGCTCTTGATTTCTTATTA
AATTGATTTTTTTTTAAATGTAAGAGAAAGGAGTTTGTTATATCAAGATCATCACATAAT
TTAAATACTTCTACTGTTTAATCTTGCGCATATTATCATTTTATTAATTCTGGAGTTTCT
AATGCTCTAAATTGTTTATGGTATCTTTCTCGGCTGACTATAATGTATATTACTCATGAA
AATTTAAGAAAATAATACATTATATAATTAATACATTTAAATTAGCTCTCTTCATAAATT
TGTAGCACTAAGAAAGTAAATTTAATGTTATGCAGAATGTGTAACCTTTTCTATTACTTT
TTAGATTTATAAATATAATTGCGAACAAAAATAATCGTAGACATGAGAAAAAACACTAAC
ATGAACAATAAATCTCTTAAAGTTTTAAAAAGGTTAGAAATAATAATAAAAATGTAAAGC
AAGAATAAGAATTTATAAAATATGAGTCATTGAATTATAATTTTTGATCTTGAAATCTTT
ACTGGATTTTGATATAATGATATTTTTCATAATTAAAATCTTAATGTATTATCTTCAAGT
GGAAAATTTGCTTTCACAATTGTGACAGAGAAGTAGATAATTGCTATACTCTTAACTGGA
TAGTTCTTTGTTTGAGGCGCTGTTCTGCTGTTAGACCCTGGTCTTACCTTAGAGCCAGCA
CTGATTGTATTGTATTATATAAATAGATGAAACAACATTATAATGAGATCTTAGATTCAG
GGGATTTGCAGTGCTCTATGCCTTTTCACATACACTAGGATAGTAATTTTGAAAAATTTT
GGATTTAATTTATATATAATTCTCCTATTGTATGTGTTCTACTATCATCTGTCACTTCTA
TTATACAATAAAATGTTGTATTGTCACTGGAATATACTCACGTCAGAGTGGCATTAACTG
TGGTGAAATATGCTTTTCAGAAAATGCCCAACACTAGTCTTTATCGCTCATCACAATACT
TAACAGATGAGGGATAGATTGTATGAGTTAGGCTGTTCTGTAAGTACCCAGATCGTATGG
ATTTAGGTGAGTGTCCCAAAATACATGATCTGGCTCTACGGGCGGACTATGAAATAGCTT
CCAAGACCAAAGATTATTTCTATGACATTGATGCTACAGAGCACTTAGAGGCGTTTATAG
CTGATTGTGATCGTCGAACTACTGCTGCTAAGCAACGTCTGGCGGAGACACAAGAAGAAC
TGTCAGCAGAAGTGACGGAGAAAGCCAATGCTGTTCATGAATTGGCAGAGCAAATAGGGC
AGAAACTGGCTCGGGCTGAGGCACTCGGAGAAGAGGGTATGGTCGAGGAGAGTGTCAAAT
TAATGGGAGAGATTGACGAACTCCGCAAAAAGAAAGCTATCGCCGAGCAAGACTATCGTA
ATTCCATGCCCGCTTCGTCCTACCAACAGCAGAAGTTACGAGTTTGCGAAGTTTGTTCAG
CCTATCTTGGCATTCACGACAATGATAGACGTTTGGCCGATCATTTTGGAGGAAAATTGC
ATCTCGGATTCATAACTATTCGTGAAAAATTAACAGAATTAAAGAAAACTGTGGACAAGC
GACGCGAAGAGCGCGGCGCGTCGGAGCGCGAGCGGAGCAGCGGGCGGCGGCACTACGTGG
GCGGGAGGGAGCTCGACCGGCGCGCCCGCCGGCACCGCGAGTCCGCGCGCGACCGCGACG
GCCGGCACAAGGACGACCGGGAGCGCGGGGACAAGGAACGCGACCGGACCGAGAAAGATC
GCGATCGTGGGGACAAGGAGCGCGACCGGGAACGCGAACGTGACAGGAAGCGTAGCCGAT
CACGGAGCCGAAGCAGACATGAGAATTCCCGAGAGAGATCCCGCGGCCACGACACTCGCG
AGCCCCGCAGGAGCCGCTCGCACCGCTCGTCGTCACGCGACCACCGCCGCGACTAACTTC
CACTGACACCCGTATACATATCTACGAACCCGTCAAATCGAATTCTGAAGGTCTTTTTGG
GATGGTATTTATTGTATTCCTATAGATGAGATAAATGAGATAAACTTGACAATTAATAAT
GCACTGCAAGTGAATGGATGAACTAGAAAATGGTCTTGCAAATAAGTGACTCTGACTTTA
GTAGCTTTCAAACTATAACTTACATCACATATTAAAATACGTTGAAGACCAAAACAGTGC
CTTCGGAATTGGTCCTGACGAGTGAGTGACACAATGATGTGATGAATTTTCCAAATTTTT
TTTTAGAATATTCCGATACATGGGAAGTTTGTCATGACCATAGGTTAGTTGACTGAAATT
CAGATTCTAATAAAAGCTTGCCATAAATAGTGCCGATCAATGACATATTTTCAATATCGA
TACGCGAATTCACGATACGCTTTTCTATGCGCTGTAAAGTTTATATATACACACTGAGAA
AGGAGATAGGGAATTAGCTCGCAATGCCAACCAAAACTTATTCTGTATATATTACGTACA
AATTCATACTATGTATATTATTAAACGTATTATTTGAACTAAGCCCATGTTTTTAATTTA
CAACATCAGTCAACTGTCCTATTCAATAAAAGCTTTGTAATGAATCATTGAATTTGAGTG
ATTTGTGTAGTTATCTAGTTGTTAACTCGCGTTTTATTTGCATTCACTAGTATGCAATAA
TATTCAGTTTAGTAAATAGGTTTTTTAAAGTAAATGTAGGGTTAAATATCTGAACTTAAT
TTTAAGTGTCATAATTAAATATAATTGTTTATGGGATTGGTAATGATAAAGTTACTTACC
CTTGAGAAATAATATAAACATTGAATTTGTGTTAATGATAAACGAACCTATAAAGCGTGT
GCGATTTGGAGAAACTTGTTTTTATTTGTTGCAATAAAGTAGTACTACTAAGACAAAAAA
AAAA
(3544 bp)

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