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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70122_c0_seq4
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		putative_splicing_factor_pTSR1_[Danaus_plexippus]
Ontology
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:6.05 TPM:10.56
ORF EntryO_BomoEE21196_complete:A_BomoEE_comp70122_c0_seq4
Sequence
(Nucleotide)
GTACGTTCATGTGGGTTGTAATTTTATGTTATTTCATTTTAATTTAATTTAATTTCTACC
GATTAGACTCGGTCTATTGGAAAAAAGAAAATTTCATTGTATGGGCTTTATTCCTTTCGC
CTGTCAAAGTGAGCGCAAGAAAAATATCTTTATGGATACCACCATTTTGATTTTGCCATT
TGCCAAATTATGGGAATCGTAGACAGCGCCAGTGAAAAGAATAGTAGAAATTAGGTTGAA
ATCTTTGGATTTCACTACTGATCAGATTTATTCTATCAACTTCTGCTGTCTGATTATCTG
TAAAACATTCACAAAAGGCATTAGACTTGAAAATGTCAGCACACGAGCAAATGAGGGCTA
TGCTAGATCAGCTTATGGGCACAGCTCGAAATGGTGAAAGTGACAGACATGGGGTAAAAT
TTTACGATGATTCTGTATGCAAATCATTTTTGTTGCAATGTTGTCCACATGAAATACTGT
CATCCACCAAAATGCCCAACACTAGTCTTTATCGCTCATCACAATACTTAACAGATGAGG
GATAGATTGTATGAGTTAGGCTGTTCTGTAAGTACCCAGATGTACGTATAAAACATTTAT
AGTTAGCTGAATGTAATCTTACTGCTAAGCAGGATTTAATTCAATATGGTTCTTGTCATT
AAATTGTTTACTAATGCTGCATTGGTGAGTACATATAAAATTTTAGGACCTTCAAAAAAC
TTAGCCTGGTGTGAAATATTTGGTGACATACAATAACTACATTGGGTATGTACTGTGCTG
TTTAAATGTGTAGGGGTACAAATACATTTGCATGTGCTAAAATGGAATAAAATTCTTAAA
AAAAATATATTCTAAAAACAATATACAATATGTAAGCATAAATAATAAACAAACAAAACT
GAAATAAAATTCAATTTGTTGTATGAAAAACATGATCTACATCTATATATAAAAATTGAA
AATATTAAGTGGCAATCATAGCTATTGTTCTAGTCTACACACTTTCTGTAATTGTGCTTG
ATTGTCACATTCATTTTATTTTATGGCTTCACTTCACTCTTAAAACCAAAATAGTATTGT
AAGAAATTCTGGAGGGTGTTTCCACTATTTGTTGTAAGTATTTGAAAATTATTATTGAAC
GAGGGAGTGAACCAGCTCAGTGTGCATTTGTCGGTGTTATAGTATGTATTTTATATTCTA
TATTTTACCTATGGAGATATTTTTACATATTTTCATAAAGATTGTTGAAACAGTATGATT
TGGGGTCTTTGAGTTTTGCAAGCATAAACATATGTGACACCATTCCTGACCCATACATTT
TGTCATAAAAATGAACTTTTACTTTTCATGTGGTTTTAATTTTTTCTTTTGCAGCGTATG
GATTTAGGTGAGTGTCCCAAAATACATGATCTGGCTCTACGGGCGGACTATGAAATAGCT
TCCAAGACCAAAGATTATTTCTATGACATTGATGCTACAGAGCACTTAGAGGCGTTTATA
GCTGATTGTGATCGTCGAACTACTGCTGCTAAGCAACGTCTGGCGGAGACACAAGAAGAA
CTGTCAGCAGAAGTGACGGAGAAAGCCAATGCTGTTCATGAATTGGCAGAGCAAATAGGG
CAGAAACTGGCTCGGGCTGAGGCACTCGGAGAAGAGGGTATGGTCGAGGAGAGTGTCAAA
TTAATGGGAGAGATTGACGAACTCCGCAAAAAGAAAGCTATCGCCGAGCAAGACTATCGT
AATTCCATGCCCGCTTCGTCCTACCAACAGCAGAAGTTACGAGTTTGCGAAGTTTGTTCA
GCCTATCTTGGCATTCACGACAATGATAGACGTTTGGCCGATCATTTTGGAGGAAAATTG
CATCTCGGATTCATAACTATTCGTGAAAAATTAACAGAATTAAAGAAAACTGTGGACAAG
CGACGCGAAGAGCGCGGCGCGTCGGAGCGCGAGCGGAGCAGCGGGCGGCGGCACTACGTG
GGCGGGAGGGAGCTCGACCGGCGCGCCCGCCGGCACCGCGAGTCCGCGCGCGACCGCGAC
GGCCGGCACAAGGACGACCGGGAGCGCGGGGACAAGGAACGCGACCGGACCGAGAAAGAT
CGCGATCGTGGGGACAAGGAGCGCGACCGGGAACGCGAACGTGACAGGAAGCGTAGCCGA
TCACGGAGCCGAAGCAGACATGAGAATTCCCGAGAGAGATCCCGCGGCCACGACACTCGC
GAGCCCCGCAGGAGCCGCTCGCACCGCTCGTCGTCACGCGACCACCGCCGCGACTAACTT
CCACTGACACCCGTATACATATCTACGAACCCGTCAAATCGAATTCTGAAGGTCTTTTTG
GGATGGTATTTATTGTATTCCTATAGATGAGATAAATGAGATAAACTTGACAATTAATAA
TGCACTGCAAGTGAATGGATGAACTAGAAAATGGTCTTGCAAATAAGTGACTCTGACTTT
AGTAGCTTTCAAACTATAACTTACATCACATATTAAAATACGTTGAAGACCAAAACAGTG
CCTTCGGAATTGGTCCTGACGAGTGAGTGACACAATGATGTGATGAATTTTCCAAATTTT
TTTTTAGAATATTCCGATACATGGGAAGTTTGTCATGACCATAGGTTAGTTGACTGAAAT
TCAGATTCTAATAAAAGCTTGCCATAAATAGTGCCGATCAATGACATATTTTCAATATCG
ATACGCGAATTCACGATACGCTTTTCTATGCGCTGTAAAGTTTATATATACACACTGAGA
AAGGAGATAGGGAATTAGCTCGCAATGCCAACCAAAACTTATTCTGTATATATTACGTAC
AAATTCATACTATGTATATTATTAAACGTATTATTTGAACTAAGCCCATGTTTTTAATTT
ACAACATCAGTCAACTGTCCTATTCAATAAAAGCTTTGTAATGAATCATTGAATTTGAGT
GATTTGTGTAGTTATCTAGTTGTTAACTCGCGTTTTATTTGCATTCACTAGTATGCAATA
ATATTCAGTTTAGTAAATAGGTTTTTTAAAGTAAATGTAGGGTTAAATATCTGAACTTAA
TTTTAAGTGTCATAATTAAATATAATTGTTTATGGGATTGGTAATGATAAAGTTACTTAC
CCTTGAGAAATAATATAAACATTGAATTTGTGTTAATGATAAACGAACCTATAAAGCGTG
TGCGATTTGGAGAAACTTGTTTTTATTTGTTGCAATAAAGTAGTACTACTAAGACAAAAA
AAAAA
(3245 bp)

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