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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70122_c0_seq3
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		putative_splicing_factor_pTSR1_[Danaus_plexippus]
Ontology
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:31.37 TPM:54.72
ORF EntryO_BomoEE21195_complete:A_BomoEE_comp70122_c0_seq3
Sequence
(Nucleotide)
GTACGTTCATGTGGGTTGTAATTTTATGTTATTTCATTTTAATTTAATTTAATTTCTACC
GATTAGACTCGGTCTATTGGAAAAAAGAAAATTTCATTGTATGGGCTTTATTCCTTTCGC
CTGTCAAAGTGAGCGCAAGAAAAATATCTTTATGGATACCACCATTTTGATTTTGCCATT
TGCCAAATTATGGGAATCGTAGACAGCGCCAGTGAAAAGAATAGTAGAAATTAGGTTGAA
ATCTTTGGATTTCACTACTGATCAGATTTATTCTATCAACTTCTGCTGTCTGATTATCTG
TAAAACATTCACAAAAGGCATTAGACTTGAAAATGTCAGCACACGAGCAAATGAGGGCTA
TGCTAGATCAGCTTATGGGCACAGCTCGAAATGGTGAAAGTGACAGACATGGGGTAAAAT
TTTACGATGATTCTGTATGCAAATCATTTTTGTTGCAATGTTGTCCACATGAAATACTGT
CATCCACCCGTATGGATTTAGGTGAGTGTCCCAAAATACATGATCTGGCTCTACGGGCGG
ACTATGAAATAGCTTCCAAGACCAAAGATTATTTCTATGACATTGATGCTACAGAGCACT
TAGAGGCGTTTATAGCTGATTGTGATCGTCGAACTACTGCTGCTAAGCAACGTCTGGCGG
AGACACAAGAAGAACTGTCAGCAGAAGTGACGGAGAAAGCCAATGCTGTTCATGAATTGG
CAGAGCAAATAGGGCAGAAACTGGCTCGGGCTGAGGCACTCGGAGAAGAGGGTATGGTCG
AGGAGAGTGTCAAATTAATGGGAGAGATTGACGAACTCCGCAAAAAGAAAGCTATCGCCG
AGCAAGACTATCGTAATTCCATGCCCGCTTCGTCCTACCAACAGCAGAAGTTACGAGTTT
GCGAAGTTTGTTCAGCCTATCTTGGCATTCACGACAATGATAGACGTTTGGCCGATCATT
TTGGAGGAAAATTGCATCTCGGATTCATAACTATTCGTGAAAAATTAACAGAATTAAAGA
AAACTGTGGACAAGCGACGCGAAGAGCGCGGCGCGTCGGAGCGCGAGCGGAGCAGCGGGC
GGCGGCACTACGTGGGCGGGAGGGAGCTCGACCGGCGCGCCCGCCGGCACCGCGAGTCCG
CGCGCGACCGCGACGGCCGGCACAAGGACGACCGGGAGCGCGGGGACAAGGAACGCGACC
GGACCGAGAAAGATCGCGATCGTGGGGACAAGGAGCGCGACCGGGAACGCGAACGTGACA
GGAAGCGTAGCCGATCACGGAGCCGAAGCAGACATGAGAATTCCCGAGAGAGATCCCGCG
GCCACGACACTCGCGAGCCCCGCAGGAGCCGCTCGCACCGCTCGTCGTCACGCGACCACC
GCCGCGACTAACTTCCACTGACACCCGTATACATATCTACGAACCCGTCAAATCGAATTC
TGAAGGTCTTTTTGGGATGGTATTTATTGTATTCCTATAGATGAGATAAATGAGATAAAC
TTGACAATTAATAATGCACTGCAAGTGAATGGATGAACTAGAAAATGGTCTTGCAAATAA
GTGACTCTGACTTTAGTAGCTTTCAAACTATAACTTACATCACATATTAAAATACGTTGA
AGACCAAAACAGTGCCTTCGGAATTGGTCCTGACGAGTGAGTGACACAATGATGTGATGA
ATTTTCCAAATTTTTTTTTAGAATATTCCGATACATGGGAAGTTTGTCATGACCATAGGT
TAGTTGACTGAAATTCAGATTCTAATAAAAGCTTGCCATAAATAGTGCCGATCAATGACA
TATTTTCAATATCGATACGCGAATTCACGATACGCTTTTCTATGCGCTGTAAAGTTTATA
TATACACACTGAGAAAGGAGATAGGGAATTAGCTCGCAATGCCAACCAAAACTTATTCTG
TATATATTACGTACAAATTCATACTATGTATATTATTAAACGTATTATTTGAACTAAGCC
CATGTTTTTAATTTACAACATCAGTCAACTGTCCTATTCAATAAAAGCTTTGTAATGAAT
CATTGAATTTGAGTGATTTGTGTAGTTATCTAGTTGTTAACTCGCGTTTTATTTGCATTC
ACTAGTATGCAATAATATTCAGTTTAGTAAATAGGTTTTTTAAAGTAAATGTAGGGTTAA
ATATCTGAACTTAATTTTAAGTGTCATAATTAAATATAATTGTTTATGGGATTGGTAATG
ATAAAGTTACTTACCCTTGAGAAATAATATAAACATTGAATTTGTGTTAATGATAAACGA
ACCTATAAAGCGTGTGCGATTTGGAGAAACTTGTTTTTATTTGTTGCAATAAAGTAGTAC
TACTAAGACAAAAAAAAAA
(2359 bp)

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