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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70122_c0_seq2
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		putative_splicing_factor_pTSR1_[Danaus_plexippus]
Ontology
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:4.42 TPM:7.71
ORF EntryO_BomoEE21194_complete:A_BomoEE_comp70122_c0_seq2
Sequence
(Nucleotide)
GTACGTTCATGTGGGTTGTAATTTTATGTTATTTCATTTTAATTTAATTTAATTTCTACC
GATTAGACTCGGTCTATTGGAAAAAAGAAAATTTCATTGTATGGGCTTTATTCCTTTCGC
CTGTCAAAGTGAGCGCAAGAAAAATATCTTTATGGATACCACCATTTTGATTTTGCCATT
TGCCAAATTATGGGAATCGTAGACAGCGCCAGTGAAAAGAATAGTAGAAATTAGGTTGAA
ATCTTTGGATTTCACTACTGATCAGATTTATTCTATCAACTTCTGCTGTCTGATTATCTG
TAAAACATTCACAAAAGGCATTAGACTTGAAAATGTCAGCACACGAGCAAATGAGGGCTA
TGCTAGATCAGCTTATGGGCACAGCTCGAAATGGTGAAAGTGACAGACATGGGGTAAAAT
TTTACGATGATTCTGTATGCAAATCATTTTTGTTGCAATGTTGTCCACATGAAATACTGT
CATCCACCAAAATGCCCAACACTAGTCTTTATCGCTCATCACAATACTTAACAGATGAGG
GATAGATTGTATGAGTTAGGCTGTTCTCGTATGGATTTAGGTGAGTGTCCCAAAATACAT
GATCTGGCTCTACGGGCGGACTATGAAATAGCTTCCAAGACCAAAGATTATTTCTATGAC
ATTGATGCTACAGAGCACTTAGAGGCGTTTATAGCTGATTGTGATCGTCGAACTACTGCT
GCTAAGCAACGTCTGGCGGAGACACAAGAAGAACTGTCAGCAGAAGTGACGGAGAAAGCC
AATGCTGTTCATGAATTGGCAGAGCAAATAGGGCAGAAACTGGCTCGGGCTGAGGCACTC
GGAGAAGAGGGTATGGTCGAGGAGAGTGTCAAATTAATGGGAGAGATTGACGAACTCCGC
AAAAAGAAAGCTATCGCCGAGCAAGACTATCGTAATTCCATGCCCGCTTCGTCCTACCAA
CAGCAGAAGTTACGAGTTTGCGAAGTTTGTTCAGCCTATCTTGGCATTCACGACAATGAT
AGACGTTTGGCCGATCATTTTGGAGGAAAATTGCATCTCGGATTCATAACTATTCGTGAA
AAATTAACAGAATTAAAGAAAACTGTGGACAAGCGACGCGAAGAGCGCGGCGCGTCGGAG
CGCGAGCGGAGCAGCGGGCGGCGGCACTACGTGGGCGGGAGGGAGCTCGACCGGCGCGCC
CGCCGGCACCGCGAGTCCGCGCGCGACCGCGACGGCCGGCACAAGGACGACCGGGAGCGC
GGGGACAAGGAACGCGACCGGACCGAGAAAGATCGCGATCGTGGGGACAAGGAGCGCGAC
CGGGAACGCGAACGTGACAGGAAGCGTAGCCGATCACGGAGCCGAAGCAGACATGAGAAT
TCCCGAGAGAGATCCCGCGGCCACGACACTCGCGAGCCCCGCAGGAGCCGCTCGCACCGC
TCGTCGTCACGCGACCACCGCCGCGACTAACTTCCACTGACACCCGTATACATATCTACG
AACCCGTCAAATCGAATTCTGAAGGTCTTTTTGGGATGGTATTTATTGTATTCCTATAGA
TGAGATAAATGAGATAAACTTGACAATTAATAATGCACTGCAAGTGAATGGATGAACTAG
AAAATGGTCTTGCAAATAAGTGACTCTGACTTTAGTAGCTTTCAAACTATAACTTACATC
ACATATTAAAATACGTTGAAGACCAAAACAGTGCCTTCGGAATTGGTCCTGACGAGTGAG
TGACACAATGATGTGATGAATTTTCCAAATTTTTTTTTAGAATATTCCGATACATGGGAA
GTTTGTCATGACCATAGGTTAGTTGACTGAAATTCAGATTCTAATAAAAGCTTGCCATAA
ATAGTGCCGATCAATGACATATTTTCAATATCGATACGCGAATTCACGATACGCTTTTCT
ATGCGCTGTAAAGTTTATATATACACACTGAGAAAGGAGATAGGGAATTAGCTCGCAATG
CCAACCAAAACTTATTCTGTATATATTACGTACAAATTCATACTATGTATATTATTAAAC
GTATTATTTGAACTAAGCCCATGTTTTTAATTTACAACATCAGTCAACTGTCCTATTCAA
TAAAAGCTTTGTAATGAATCATTGAATTTGAGTGATTTGTGTAGTTATCTAGTTGTTAAC
TCGCGTTTTATTTGCATTCACTAGTATGCAATAATATTCAGTTTAGTAAATAGGTTTTTT
AAAGTAAATGTAGGGTTAAATATCTGAACTTAATTTTAAGTGTCATAATTAAATATAATT
GTTTATGGGATTGGTAATGATAAAGTTACTTACCCTTGAGAAATAATATAAACATTGAAT
TTGTGTTAATGATAAACGAACCTATAAAGCGTGTGCGATTTGGAGAAACTTGTTTTTATT
TGTTGCAATAAAGTAGTACTACTAAGACAAAAAAAAAA
(2438 bp)

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