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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70122_c0_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		putative_splicing_factor_pTSR1_[Danaus_plexippus]
Ontology
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:10.16 TPM:17.72
ORF EntryO_BomoEE21193_complete:A_BomoEE_comp70122_c0_seq1
Sequence
(Nucleotide)
AGATTATTTCTATGACATTGATGTGAGTATAAATAACTGCATTTTTTTTTGTTAAAATTG
AAATATAAGATATTTACACAATTTCAAATTTTGATTAATGTATCTTAAAACTTCCAGTCT
CAAATGTTTTGTTTTGACATGAATTCGACCATGGATCAAAGCCGTAAGACTTATAATTAT
TGTATTTAAATTGTGGTCAATTAAATAAAATTTTACTATTTTATGTAAAGGCTACAGAGC
ACTTAGAGGCGTTTATAGCTGATTGTGATCGTCGAACTACTGCTGCTAAGCAACGTCTGG
CGGAGACACAAGAAGAACTGTCAGCAGAAGTGACGGAGAAAGCCAATGCTGTTCATGAAT
TGGCAGAGCAAATAGGGCAGAAACTGGCTCGGGCTGAGGCACTCGGAGAAGAGGGTATGG
TCGAGGAGAGTGTCAAATTAATGGGAGAGATTGACGAACTCCGCAAAAAGAAAGCTATCG
CCGAGCAAGACTATCGTAATTCCATGCCCGCTTCGTCCTACCAACAGCAGAAGTTACGAG
TTTGCGAAGTTTGTTCAGCCTATCTTGGCATTCACGACAATGATAGACGTTTGGCCGATC
ATTTTGGAGGAAAATTGCATCTCGGATTCATAACTATTCGTGAAAAATTAACAGAATTAA
AGAAAACTGTGGACAAGCGACGCGAAGAGCGCGGCGCGTCGGAGCGCGAGCGGAGCAGCG
GGCGGCGGCACTACGTGGGCGGGAGGGAGCTCGACCGGCGCGCCCGCCGGCACCGCGAGT
CCGCGCGCGACCGCGACGGCCGGCACAAGGACGACCGGGAGCGCGGGGACAAGGAACGCG
ACCGGACCGAGAAAGATCGCGATCGTGGGGACAAGGAGCGCGACCGGGAACGCGAACGTG
ACAGGAAGCGTAGCCGATCACGGAGCCGAAGCAGACATGAGAATTCCCGAGAGAGATCCC
GCGGCCACGACACTCGCGAGCCCCGCAGGAGCCGCTCGCACCGCTCGTCGTCACGCGACC
ACCGCCGCGACTAACTTCCACTGACACCCGTATACATATCTACGAACCCGTCAAATCGAA
TTCTGAAGGTCTTTTTGGGATGGTATTTATTGTATTCCTATAGATGAGATAAATGAGATA
AACTTGACAATTAATAATGCACTGCAAGTGAATGGATGAACTAGAAAATGGTCTTGCAAA
TAAGTGACTCTGACTTTAGTAGCTTTCAAACTATAACTTACATCACATATTAAAATACGT
TGAAGACCAAAACAGTGCCTTCGGAATTGGTCCTGACGAGTGAGTGACACAATGATGTGA
TGAATTTTCCAAATTTTTTTTTAGAATATTCCGATACATGGGAAGTTTGTCATGACCATA
GGTTAGTTGACTGAAATTCAGATTCTAATAAAAGCTTGCCATAAATAGTGCCGATCAATG
ACATATTTTCAATATCGATACGCGAATTCACGATACGCTTTTCTATGCGCTGTAAAGTTT
ATATATACACACTGAGAAAGGAGATAGGGAATTAGCTCGCAATGCCAACCAAAACTTATT
CTGTATATATTACGTACAAATTCATACTATGTATATTATTAAACGTATTATTTGAACTAA
GCCCATGTTTTTAATTTACAACATCAGTCAACTGTCCTATTCAATAAAAGCTTTGTAATG
AATCATTGAATTTGAGTGATTTGTGTAGTTATCTAGTTGTTAACTCGCGTTTTATTTGCA
TTCACTAGTATGCAATAATATTCAGTTTAGTAAATAGGTTTTTTAAAGTAAATGTAGGGT
TAAATATCTGAACTTAATTTTAAGTGTCATAATTAAATATAATTGTTTATGGGATTGGTA
ATGATAAAGTTACTTACCCTTGAGAAATAATATAAACATTGAATTTGTGTTAATGATAAA
CGAACCTATAAAGCGTGTGCGATTTGGAGAAACTTGTTTTTATTTGTTGCAATAAAGTAG
TACTACTAAGACAAAAAAAAAA
(2002 bp)

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