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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70114_c0_seq2
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_decapping_nuclease_DXO_homolog_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0006402 P mRNA catabolic process
GO:0008152 P metabolic process
GO:0008409 F 5'-3' exonuclease activity
GO:0016787 F hydrolase activity
GO:0034353 F RNA pyrophosphohydrolase activity
GO:0046872 F metal ion binding
GO:0050779 P RNA destabilization
GO:0071028 P nuclear mRNA surveillance
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:3.57 TPM:6.23
ORF EntryO_BomoEE21159_complete:A_BomoEE_comp70114_c0_seq2
Sequence
(Nucleotide)
ATTGCTTTAGGGGGAAAGTTTTCGAACAGTTGGCGACACTGTAAAGTGTCCTACTTAAAA
CTAATGAATAAATTTTCAAAATAAACAAATTTCGCATCGATAGTCGAGACATTACACTAT
TTCATGAATTATTATTTAATTTAATATGCAAATTCAGCCAGAACTTCATGTGAATGCTAG
CATTTACTCAAATTCATTTCCTCGATTTGATCGTCCAAAAGTGATAGGATATATTGGTCT
CCACAATCTAAAATTTTGTAAAACTTTACGAGACAAAAAAGTGTGTTTTGATTTGAATTT
GCATTTAGACAAAGTAAAGCGTAAACCAGTAGATCGGGACGTTAAATTAGATGATTTGTT
GCATTTCTTACTTACACAAGAGCACAGATTAAACTTTCCAATACAGAAGACTATTAACGA
TGCCCCGATTCACTGTTACCGGGGTCTCATGACATGTGTTGCGTGTACACCGTATGAGAA
TACAGAACCATGGAAAATAGTTACGATTTTACATAAAGGTAACATATACTTATGCGCGAG
AGACACTGATGAAAAGAAACATAGAAATCGTAATATGTCTGAGAAAGATAAGCAGTTCAC
ATCATGGGGCTTTAAATTTGAACAATTCATGACATCAGATCATCCTGAAGCCAATCCCAA
TCCTGATGTACCTGTAGATGAAACAGAAGAATTCTCATTGGTTTTAACTACGAAATTGAA
CAATCACAAAATAATTTATGGAGCAGAAATGGATGCGATCAGATGTGACAAAGTAGTGGT
CCCATCCCCACCATCAAATGATGCTGATCCTCAAACTGTTTTAGAGTATCTGTGTGATAA
GGAATTCATTGAGTTAAAAACAAATAGGCATATAGAAAATAATAAACAAGAGATAAATTT
CAGGAGGTACAAATGCAAAAAATGGTGGTGTCAATCATTTCTTGTTGGAGTAGACACTAT
ATTATGTGGATTTCGAAATGATAAAGGAATAGTTGAAGAGTTAAAAGTGTTCACAGTAAA
AGAATTATCAAAACAAAGTAAGAAATATTGGAGTGGCAATGTTTGCTTTAATTTCTTAGA
TACATTCTTTACTTACGTAAAAAGATGTCTCATTAGAAGAGTGAAACAAAAATACGGAGA
AAAAGCATTGCAAAATTTACATAACTTACCATTAGTTAGTTTACTTTTTGAATGGAATCC
TGAAGCACATGTACAAGTTAACGAAGCTTACACATATGAAGATGATCCTATATTACCCGA
ATTATTTATTAAAAACTATGGTTCTAGAGAACTAATTTGAATAAAATATTTCAGTTATTT
TAGAAGGCTTGTTAAATACGAATGAATGAATGAATGAAATGTAATCAAATCT
(1372 bp)

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