SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70102_c0_seq8
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_microtubule-actin_cross-linking_factor_1-like,_partial_[Plutella_xylostella]
Ontology
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010632 P regulation of epithelial cell migration
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016887 F ATP hydrolysis activity
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042060 P wound healing
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0044822 F RNA binding
GO:0045773 P positive regulation of axon extension
GO:0046872 F metal ion binding
GO:0051015 F actin filament binding
GO:0051893 P regulation of focal adhesion assembly
Transcript
Level		FPKM:0.46 TPM:0.81
ORF EntryO_BomoEE20983_5prime_partial:A_BomoEE_comp70102_c0_seq8
Sequence
(Nucleotide)
GTCGCCGTATCATTAAAAAAAAAATAAAAAAAAAAATATAAAAAAAAAATAAAAAAAAAA
AATTTTTTTTTTTATTTTTTTTTTTAATTAAGCTTGGCTTAATTGGCGAATCGGTTAATA
AATGTTAGTATAATTTTAATACAAATATATCATAATCGGCACTTGTTGCTATGCCGATGC
CAGCCGCTCTGTTCTCGCACAAAGCCAATTAATATTAAACTAATATCGGTTTGAAGTTTC
TTAGTGAGCGGCTCAAAAGCGTCAAAGCGACTTGCATTGCATAGATTAGATCTGTCATCT
GTCATTTCTCAGTCGCGTGTGTCGATGAGTTGTTTGTTTACGTTCGTTTACAATCGGAAT
GGTTCGCGTTTCTCTGTGGTTTTGGGCGTGGCGGGGGCGCGGCGGGCGGCGGGCGTCGCC
GGCGTGCCGGACTCCGACGCGTCCGACGGCTTGCGCAGTAGACGAGACACCGCGGTCTGC
TGTCCCGACCGCACCGGCGTCGTGCTGCCCGATGGGGTCCTTTGTCTCGCTAGGGGCGGC
ACGACCATCAGTGTCGGTATACTTGAGGTGCGATACATCCCTCCGCTAGAATACCTTCCA
CTAGCCGGCGTCAGGTAACCGGTCGGCGTCCGAGGACGGGAGCCGTTCGGCGTGCTAACC
CCAAGCTTGCTTGCATTGGCGGCAGCACGCGCGATCGAAGTCTTCGTATTCGTGACTTTC
CTCATGGGAATGCGGGACGGCGTTGTCGCATCGTCTGTACTATCCAAGGATAAATTTGAT
CCATGTCTCGAAGGGGGTTTTGATCCTGCCCTCGATCCAGCTCGAGAACCGGGTCGAGAT
GTTCCCGGTGTCAAAGTGGACCTCGGAACGCTGGGCTTCCTGTATCTTGTTCCAAGTCCG
CTCGCCGCTTCGTTATCACTGAGCGAGTCTGGTGTTCCTGCACTCAACGAAGATCTGGAA
GCGCGACCGGCCGCTCCCGCTCCAGCGGACATAGGCACCGATCGAGCTGTTCTTTCCCTC
ACCCAATGGTATCCTGGAGATGGTTGGTATCCGTGATGGTGTGTATAATGATGGGCACCC
GGCGTCGTGGAGCCCTGAGATCTTGAATGGCCGTAAATGAACGCCTGCTTTGTGCCATGT
GTAGAACCGACGTGAAGTGGATATGAGCACGGGAGCTCTTCCCGCTGTCTCAAAGCCTCA
AATATAGGCCTCAACTGCTCCATAAATTCTTCAGCTCTGCAGGGATCGTTCTTCACGAGG
AACTCGTCGAGCGCCACCCAGCCCCCTCCGACCCTCACCATGACGGTGGAGCGGAGGATA
CGGACTAGACGCTGTTTCTGGGAGTCCCCGAACCTGTATTTCCCTTCTCCGACCTGGAAC
ACGCGGAACTTCTGTCGGCACGTGCACAGCATCACGAGTCGCTTCACCTCGTCGTGAATT
TTGTCCGCATCGGTCGGGGGTCCGCGGCGTTCCACCCAGTCAGGGCGAAGCGCCGCAATG
AACTCCTCCCAGTCGATGAGGCCGCTACCGTTCCTGTCGAACAGATCCGCCACGGCGCCC
ATCTCCAGCCGGGATGTGTCGAATTTGGTGTTGACGATGCCATCGATGAACTCGTTCCTC
GGTATCAGCCCGTTGTTGTCCTTGTCCATTTTACGGAACAGATCTGTCAGGCGGGACTTC
TTGTGGTTCATGAACTTGAGGAACCTCTTCCTCCAGTCGTCCCAGCTGAAGTTGGAGACG
CGCTGAAGTTCCTTGAGATGGGCGAGGCGCTCGTGCAGCCTCCGCTGGCGCTCCCAGGCG
AGCAGCCACACGTTGCGCCACCTGTCCCACAGCTGCTTCACGCGGGGCGACCTGAACTCC
GGTTCTGCGCCTTTGCTTCCCTTCGGCGGGAATCGGGGTCCGTAGTGGGGCAGGTTCCGA
TCTGGCGTCTCCCGTCCAGGGCTGATACGA
(1950 bp)

- SilkBase 1999-2023 -