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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70102_c0_seq5
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_dystonin-like_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005882 C intermediate filament
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0007010 P cytoskeleton organization
GO:0007050 P regulation of cell cycle
GO:0007155 P cell adhesion
GO:0007409 P axonogenesis
GO:0008090 P retrograde axonal transport
GO:0008092 F cytoskeletal protein binding
GO:0009898 C cytoplasmic side of plasma membrane
GO:0014704 C intercalated disc
GO:0015629 C actin cytoskeleton
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0030018 C Z disc
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0030424 C axon
GO:0031673 C H zone
GO:0035371 C microtubule plus-end
GO:0042383 C sarcolemma
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0045104 P intermediate filament cytoskeleton organization
GO:0046872 F metal ion binding
GO:0046907 P intracellular transport
GO:0048471 C perinuclear region of cytoplasm
GO:0051010 F microtubule plus-end binding
GO:0097038 C perinuclear endoplasmic reticulum
GO:0097481 C postsynaptic density
GO:1904115 C axon cytoplasm
Transcript
Level		FPKM:0.32 TPM:0.55
ORF EntryO_BomoEE20966_5prime_partial:A_BomoEE_comp70102_c0_seq5
Sequence
(Nucleotide)
TTTAGCCAAGATAATTGTTATTCTTTATTTGATATTGAAATCAATATTATGAGATTTATT
ATTATATTTTAAAACAGTAGCTTTTCACGATCGTTATTTTATACAAAAAAAATATAAGCT
TTCATAAATGATTTGCTCCGTTTTTATATTATAAAAACAACATTCGATTTAAACGAAATG
ACCAGATTAATAGTTTTTTTTTTTTAATTTTATTTCTAAAAGTTTTATTACAGAGTCCGA
TTATAATCAACAGATATATACTTAAGTGACGGTTAACATTATAAATGAGAAAGATTACAT
AATATTAAAGCGCTTGTTTAACAATGTGAATGGTTAGCTTTTTTTTTTATTTTACAGTAG
TCGTTTCCCGACGTACTTTGCTAGCCATTTTATTAATGCGAATTTCGACACGATTGGCGT
GACCGTGCCTGATGTCTAAAAGTATGGACTCCGTTGATTGTGCCAGAAACGCAATAGAAC
ATACAAAATAATGTACACATTCAAGATAACTTTAATTCTTAAATTAAAGAAAACAAGAAA
AAAAAATTAATGAAAATGATGGGAAACATGATTGTGTATTACGCAAAAATGTAAAATATT
CATAAATAAATTCTATTATATCACCTTAACGTATCGCCGATAATATTTTTAATAGGATCA
TTTCGAATACGTAATCTGGCGTTATCACGAAATCGAAACGGATCCAAAAAAAAAACATTC
ACCGGCAATAACCTAGAGTCTCAATTAACAAAATGGTCCCTAAAGAAAATTATTCCACAA
AAAAAAAAAGTTTGAAGAAATCACACTTTCCTTCCCGTCTCCTTCACATCGTGACTTATA
CGTATCATAAAACATACACTAACAATTATGGCAACGTCGACAATAAATAAGAGACAAAGG
GGAATTATACAAATCGACATAATAAGGTATATAAAAAAAAAAAACATTGTATGAACATAG
AAAATAAAAAACAGCACAAAATAATTATTAGAACATTGAAATAATCCTGCAGTGCAACAT
TTGCATGTTCAGTAGAAAAAAATATGTATACAAGGCAACGAGTGCAGACTTCAAGTTTTA
CTACTAACTTCTATTACTTCTTAACTAAAAAGCCGCATCCGCGCGTCCTTCGTTTTTTTT
TATTTTTTTTTTTAATTAAGCTTGGCTTAATTGGCGAATCGGTTAATAAATGTTAGTATA
ATTTTAATACAAATATATCATAATCGGCACTTGTTGCTATGCCGATGCCAGCCGCTCTGT
TCTCGCACAAAGCCAATTAATATTAAACTAATATCGGTTTGAAGTTTCTTAGTGAGCGGC
TCAAAAGCGTCAAAGCGACTTGCATTGCATAGATTAGATCTGTCATCTGTCATTTCTCAG
TCGCGTGTGTCGATGAGTTGTTTGTTTACGTTCGTTTACAATCGGAATGGTTCGCGTTTC
TCTGTGGTTTTGGGCGTGGCGGGGGCGCGGCGGGCGGCGGGCGTCGCCGGCGTGCCGGAC
TCCGACGCGTCCGACGGCTTGCGCAGTAGACGAGACACCGCGGTCTGCTGTCCCGACCGC
ACCGGCGTCGTGCTGCCCGATGGGGTCCTTTGTCTCGCTAGGGGCGGCACGACCATCAGT
GTCGGTATACTTGAGGTGCGATACATCCCTCCGCTAGAATACCTTCCACTAGCCGGCGTC
AGGTAACCGGTCGGCGTCCGAGGACGGGAGCCGTTCGGCGTGCTAACCCCAAGCTTGCTT
GCATTGGCGGCAGCACGCGCGATCGAAGTCTTCGTATTCGTGACTTTCCTCATGGGAATG
CGGGACGGCGTTGTCGCATCGTCTGTACTATCCAAGGATAAATTTGATCCATGTCTCGAA
GGGGGTTTTGATCCTGCCCTCGATCCAGCTCGAGAACCGGGTCGAGATGTTCCCGGTGTC
AAAGTGGACCTCGGAACGCTGGGCTTCCTGTATCTTGTTCCAAGTCCGCTCGCCGCTTCG
TTATCACTGAGCGAGTCTGGTGTTCCTGCACTCAACGAAGATCTGGAAGCGCGACCGGCC
GCTCCCGCTCCAGCGGACATAGGCACCGATCGAGCTGTTCTTTCCCTCACCCAATGGTAT
CCTGGAGATGGTTGGTATCCGTGATGGTGTGTATAATGATGGGCACCCGGCGTCGTGGAG
CCCTGAGATCTTGAATGGCCGTAAATGAACGCCTGCTTTGTGCCATGTGTAGAACCGACG
TGAAGTGGATATGAGCACGGGAGCTCTTCCCGCTGTCTCAAAGCCTCAAATATAGGCCTC
AACTGCTCCATAAATTCTTCAGCTCTGCAGGGATCGTTCTTCACGAGGAACTCGTCGAGC
GCCACCCAGCCCCCTCCGACCCTCACCATGACGGTGGAGCGGAGGATACGGACTAGACGC
TGTTTCTGGGAGTCCCCGAACCTGTATTTCCCTTCTCCGACCTGGAACACGCGGAACTTC
TGTCGGCACGTGCACAGCATCACGAGTCGCTTCACCTCGTCGTGAATTTTGTCCGCATCG
GTCGGGGGTCCGCGGCGTTCCACCCAGTCAGGGCGAAGCGCCGCAATGAACTCCTCCCAG
TCGATGAGGCCGCTACCGTTCCTGTCGAACAGATCCGCCACGGCGCCCATCTCCAGCCGG
GATGTGTCGAATTTGGTGTTGACGATGCCATCGATGAACTCGTTCCTCGGTATCAGCCCG
TTGTTGTCCTTGTCCATTTTACGGAACAGATCTGTCAGGCGGGACTTCTTGTGGTTCATG
AACTTGAGGAACCTCTTCCTCCAGTCGTCCCAGCTGAAGTTGGAGACGCGCTGAAGTTCC
TTGAGATGGGCGAGGCGCTCGTGCAGCCTCCGCTGGCGCTCCCAGGCGAGCAGCCACACG
TTGCGCCACCTGTCCCACAGCTGCTTCACGCGGGGCGACCTGAACTCCGGTTCTGCGCCT
TTGCTTCCCTTCGGCGGGAATCGGGGTCCGTAGTGGGGCAGGTTCCGATCTGGCGTCTCC
CGTCCAGGGCTGATACGACTTCCTCTCCTACTTCGCGAGTGTAGTCTGGACCTGAATCTT
CTAGATCCGTAGTAGTCGGGCGAGACCGAGCGGTCCCGGTGCAGGTCGTGCTGGGAGCCG
CGCCCAGGAGTTCCTTTCGTGGCGCTCTTCGCTGATACCTTCCTTGGCGTAGATTCCCTT
CCTTGGGTTTGACTCTTGACCTGGTACGCTTTGCAGACGCGGTCTACTTCGTTCTGTCTC
TTCTGAGTGTGCTCCATCAGTTCTTTGTGGTCTTCTATCAAGCCCTCGAGAAGCTCTATG
GATTCAGGCAGCGGCTCAGTCTCCATTGATAGCAAGTTGTTCTCGAGTCCGGTGAGCCAC
TGCAGCAACTCCTCGAGCACGAGGTCCAGGTCTCTGAGGCTCTGCATGTGCGCGTCCAGC
TTGCCGCCCCGCTGCATGGCCCATTGCCATACCTCGTCCCAGCGGCTCTGTATGATGGTG
ATCCAGTGCTTGATGACGGTGACGGCGTCGGTGTGCGCCTTGCTCAGGATAGAGTGAGCC
AGCGTGATGGTCTCGTCCTTGTCCTGCTTCTTCTCGTTGAGTTCGCGCACGAAGCGCTCG
TGGTCCCGTATCTGCTGCTGCGTCTCCTCGTCGCCTTCGGGGAGCTGGCCCGAGAAGCGA
AGCTTGGTCTCCGCGTCCGATAGCCACTCCAGGAGCATGTTCACAGAGCGATGCAGCTTT
TCCGCCTCTTTGAGTGCGCCCTCCAACTTGTGCGCTTTCCTCTCGCTGAGGATGAGTACA
CTGTCCCACAGTTGCTTCAGTTCGCTGCCTTGTTGGCGGATGTTGGCGGCGTCTTCCAGT
GGCACGGTGGCCTCCAGGTCCCGGCCGGTCTTGGTGACGGACTGCATCTGCTGCTCGCGC
GAATGCAGGTCCTCTTCGAATTGTTTATGTTGTTCGATCAGCGCCATCACGGTGTCCAGG
TCGCCGTGCACAGGCGCGTCTCCTTCCAGAAGCTTCTGTTGCTTTTTGAGCCAGTCCAGC
AGCGCCGACATGGCGTCTTTGAACTGTCCCGAGTACAGCAGCGCCTCTTCCAGTTTCCGT
TGCCTGTCAACAGCCTTAGAGCACACGGTTGTCCATTTCGTCTTCATATCCGTTATCATT
GTCTTCAGCGGGTTCTCGTCGCCCTTGGGAGCCTTGTCCTTGAGATGCTTGCCGGTCTTC
ATAGTGAGGTCGTAGGCTGGCTGTTTGGAAGCCAGAGCCTTTTGGAACTCGCGGTGTTTG
TTTAATCTCTGTTTGATCTTATCAGGGTCGTTGACCGTCGCCTCCGAGTTCAGTTGGTCC
AGCTGCTCCTCGGTCTCGTTCAGCCAATTCATCAGGTTGTTCCACATGTCACTGAACTCC
TTAGCCTCTTTGAAGCCATGGTCGAGGGCCCTGGTCCTTTCGGCAGACTTGGAGACGACC
CTCTCCCAGCGATGCTGTACGGAGACCAGCAAGTTCTTAATGAGGATCACGTCCTGCTTC
TGGCTGAAGTACTTGAGGTGTGTTCCCTTCTTGTCCAACTGCAGCATGGTCTCCCGGTGC
GTGGACACCTCCTTTTGGAAGCTCTTGTGCTCTTCGATTTGGGTGAGCAAGGTTTCCATG
ACCCTGGAGACCGGCTTGGCGGAGGTGAGGGTCTTCTCCGCGGCGGTGAGCCAGTCCACG
AAGGCCTGCAGCGCGTCGTGGAACTCCGTCGCCTCCTTCAGAGCTATCTCCAACTTGATC
TTCTTGTCTGATGCTCTGGCAGTGACATTATCCCATCGGGACTTCAAGGTCTTGAGGCTG
TGGTTGAGCTGCGAGGTCGGGTTGGGTTTCTCCTGCCGCTTGATGTACTCCTGTCCCTGC
TGCAGCACGGCTTCGACTTTGGGACGGTTCTCTTCTATTTCACTGTACACCTCCATGAAC
CTCTCCAGCTGCTCGGAGGCGGTCTCCGGGAGCCCCCCGACGGGCTTGGAGGCCGCGATG
ACGCCGTCCACTTCGGACAGCCACGACAGCAGGTCACCGATTTCCGCATTGAAACTCTGT
GCTTCTCTGAGCGCGTCCTCGAGCTCAGTTTGTCTGTCTCTTGCTTTTTGTTGTAGTTCG
CGCCATTTTTTGTTTAGTGTTGCCAGTTTTTCGGCCGTCTCGCCCGCTTCTTCGGTACCG
TGGTGCACGATCTGCGCGCCGGCGTCGTTGAGCGTGTCGACGCTGGCCTGGTGCGCCGCT
ATGTCGTTCACCAGCACCTTCAGCTTGGCCAGCTCCACCTCCAGCACCTGGGGGTCACCT
GCCACCGGTTTCAACGTGTCCAAAGTGTCTGTGGTGTTCTGTATCCACGCGAGGAGCTCC
TGCAGGGCGTGCTGGAGCTGCCCGAGTCTCAGCAGCGCCTTCTCCAGTTGCTGCTGGCGC
TCCACCATGCCGCGGAGCAAGGCCGACCAGCGAGCGTTGACCTCCGTCAGGGGCTGCTTG
ATGGCGGCCGCTTGCTCTGACGACGTTCTCTCTGTCAGCTCCTGGGCTTGCCTGTTCAAA
GCTTCGACCTTCACCATGTGAGGGTCGACCTCCTGCTTGAAGGAGGCTAGCTGAGCGATC
TGACGCTTCACGGCGTCGATGTCCGAGCCGAGCGGACCCATGCGCGAAAACTTGTCTTCC
GCCGTGTCCAGGAAGTCTTGGAGATTCTGCAAAGTGTCATGGAATTCCATCGCCTTTTCC
ATAGCATCGATGAGATTCTCCTCTCGTCTGGCGTAGAGTGCTGTGATGTTGTCCCATGCG
TTGTCTAGGTCCTCCATGTGTTTCTTGACCTCTGGCTTGTCGGGTTCCCCGCAGAGAGAC
ATGAGAGTGGAACCGGTCTTCCGTACTTTCTCCACCTCGGGCTTGGTGTGGTCGATCTCG
TGGCGGATCTCCTGCAGCGCGAGCTGCTGCTGCTGGATGGCGGGCGGGTGCGCGGCGGGC
GGCGGCTGCGCGGCCAGCGTGTCGGCGAGCTCGGCCAGCGTGCTGGACACGGCCCGC
(5997 bp)

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