SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70055_c0_seq4
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_cyclic_AMP-responsive_element-binding_protein_3-like_protein_3-B_isoform_X3_[Bombyx_mori]
Ontology
GO:0000976 F transcription cis-regulatory region binding
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0035497 F cAMP response element binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
Transcript
Level		FPKM:0.21 TPM:0.36
ORF EntryO_BomoEE20674_complete:A_BomoEE_comp70055_c0_seq4
Sequence
(Nucleotide)
CTCGTCTGCCTGTTTAGAGTGGCTTTCGTGAGCGCACGCCGCCACTTTTACCGTTACTTA
GTCATTTCATTTTGTGAACAGTTCTTGTTCAGGCACCGGTATCTGCACCTCACGTTTCAC
AGATCCTCTCACTGTTGTATCATCCTCACATTGTTATGTTTGTGTATTTATAAGAACAGT
GGTTTTCCCTTAACGGCGTATTATTGCGAAGTGAGAAGTGATAATCTGGCTTGAAACAAA
CACGTCATAAATTAACTCGCGCTTAGACATTCCGGTTCGCGTAAACAAGATATTGCCAGC
TAGGCACCATGCGGTCGCTACCTTTACCATATGCCGCACAGTAAATAGTTGAAAAAAGCC
GACAATACTGTATCAAGATCCCAGTACTTTTTGATACTACATAAAAACATTTCCAGTTTT
TTTTTTCATTGAAAAAATTTAGTTGTGATTCATAAATGTTGATGTAACATTGAAAAGTGA
AGTGTATTCCAATATGGATAAAAAAGTGGACTTGTTGTCTCTGATAGAGTCAGACACGTG
GACGGCGCCAAATGAACTCATGGAGATCTTCTCCATGGACCAGGACTATTTGGATTTTCT
CGAGGAGTCAATTCCAGATTTCAACATATGCTCTGAAAATGTATCAGAAACCTCTAAAGC
TATAAGTAGCACCTGTTCAGACAGTGGAATTTCCAGTGATCATGCTGAATTCGATTTTGA
ACAGCAACTGTCCCCGTTTCTCATACAAAACTCGTGCGAGGAGGAACTGCCGGCTCCGAT
AGCCGACGGACCCACGAGCCCCAGCACCCAGGATGTCGTCATCCGGGATTCGAATGATAC
GTCCAATAGCTCCACGGACCTCGCGGACGACGTCTTCGATATGCAGGACTTCGAGCAGAA
CGTCGTCCCCGGATTCATTAATGCGAATACATTCCACAGCCCGGATGACTCAGGAAGCGA
ACGCAGCGACGACGACGACGACCACAAGGAGACTCAGGTCAGCGACGGTCGCAACGGGTA
CCCGCGCCTCGTGCTAACCGCCGAGGAGCGCCGCCTCTTGGCGAAGGAGGGCATCACGCT
ACCCACCAGCTATCCGCTCACGAAACACGAGGAACGGGAGCTGAAGAGGATCAGACGCAA
AATCAGGAACAAGATCTCAGCTCAGGACTCGAGGAAACGCAAGAAGGAATATGTCGATGG
ACTCGAAGACAGGGTAAAACAGTGTACCGCAGAGAACCAGACGTTAATTAGGAGGATAAA
AATACTGCAGTCACAGAACCAGTCGCTGAGTGCTCAGTTGAAACGTTTACAGAACGTATT
AAAGGGTGCGAGTGGTAGCAGTACGAACAAGTCTGCCCAGCCGGCCACGTGTCTGCTAGT
GCTGCTGTTGTCCGTGGCGCTAGTGGCGCTGCCCTCCCTCCGCGACGAGGCCCCGCCCCG
CGCCTCGCCCGCCTCCCCCGCCGCGCCCGCCTCCCCCGCAGTCACGCGGGCTCTACTCTC
CGCCACCAACAAAATGACGTTGGATGAGACGGTGATCGACGATGGAGAGTTCAACATGGA
CGAGCTGATCACCTTCAACCGCCCGCACTCGGACCACGACTACCAGGTCGTCAAGAGCCT
AGACACTCACAAGGTTCTGCCAAACGGCTACGTCGACCTCCCCATAGACGAGGACTGGCC
GCCTAATCTCAAGAAACGTATGAAAAAACTCGAATTCGACTACGAAGACGGCCGGGATTA
CCTAACGCCCGTAGTCAAAGAGGAGAATTACGGCAGTTACAAGATCGAAGCGAAAATCAA
ACCGGATCTCACTGAGGATTTCTTGACGAACACACTGCTGTCCACGGGACGGAAATTAGG
AGAATTGTTCGACATTATGCCGCCGATACCCGTCAAAAACGAAGACATCGTCATTGAGGA
GGTATCCGACCACGAGACCAGAAACACGACCGAAGTCAGGAGTTTTGTTGTCAACGGCAC
CGCTAATAACTTTTAAATATACAATTATTTAATTCCTTTAAAAATTCCGTTTACTTTTTT
TTTGTTACCTTTTAATAATAATTTTACTATTAGATTTGTTTCCTGAATATTTGTGTTTTT
TTTATTTGTGAAGACGATGTATGTGACTCATGATTCCATATTTTAAGATCAATTTTTATT
TTAATAATTTTAGTCTTTTAGATTTTATGTGTTAGTGAGATTGTGAAGAATGATTATTAC
GTAAATTAAGATTATAATTTTATATTAAATTACTATATGCGGAGAGTTTATAATTTATTT
TTAAAAGTCAAAATTAATATATATACAATCAATTTTTATATTTTTTACAGAGAAATTACA
CTTTCACTGTGCATGTCTATCTATAATTTTAAGCATTTTATTTTGGGTGCAATTACATTT
TAGTTACAGATTTAATTGTTCTAGTAAAAGTATAGTTCTATCTCAATATTAGTTTTAGAT
TATTTTATATTATCTACTTACAGAGCGGACAAGATTCACTGTTGTGTTATCCTATACTGA
TTATTTTGGTTCGAATAAATATTTTATTGAAAAGATTTGTCTTTCATTGGGATACTTTAA
TTCTCATGAGCTCTTCTATAAACTACATATTACAAAAGTTTAGTTTAGATTAAAACATAT
TTAAATAAAGGATCTTGGAAATTATGTAGTCTTAAAGCTTATTAGTGTCGTGAATACAAA
TATAATGAAGTGACCGACTATAGATAAAGAGGCATTTGACTTTAAGTGTCTGTTATACTT
ATCACGGTGCAACGGGAACCGACTTGTTGGGACACAGAAGAGGAAAACCCAAAACTTTTA
AAGAAAAACGTATTCTTACTAAAGAATTCATGTCGAGTTTAGCAGCTAAACTAAACTTTA
GCTCAAACATTATTTTTATTTATCACTAGCTGACCCGGCAGACTTCG
(2927 bp)

- SilkBase 1999-2023 -