SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp70037_c2_seq1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_protein_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007280 P pole cell migration
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0007516 P hemocyte development
GO:0007517 P muscle organ development
GO:0008045 P motor neuron axon guidance
GO:0008354 P germ cell migration
GO:0008406 P gonad development
GO:0019730 P antimicrobial humoral response
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0048103 P somatic stem cell division
GO:0048542 P lymph gland development
GO:0061321 P garland nephrocyte differentiation
Transcript
Level		FPKM:11.08 TPM:19.32
ORF EntryO_BomoEE20608_complete:A_BomoEE_comp70037_c2_seq1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTAATCCGCATTGAATTGTCAATATATATATTTTTAATATTCATAT
ATTTAATATACATTATAATATAAAGTAAAATGAATTACTATAATTTTAAATAGGCAATAT
TCAATTTTTTAACACATTTTCTTTCAACCTATGTGTATGTTTAACAATCTAAAGTAGACA
CTTACATTTAACAAATTAGCAACCTTTACGTGACACTCGCTCGCAAATACAACAAACACA
TTAATATTATATGGCATGAGGAATTCACATTCGCTTACAACTTCAAACTTTACATACTAG
AAGAAAATACTTTTTTGCAACATTATTATTGCACAATAAAAATAAGCTACAGTACTTAAT
GCCTTCAGAAAGGAAATGAAGCTTATCTTTTTTTGGCACGGCGACTTAACATTTACTTAT
TTCCTAGACGTGGTTATTATTTACAGATCTTCACGTCGTATATTACGTAAGTTATCTTTG
GTTTGTCTAGCCCACCTGTCAATTTTGACACTTATCAATTTATTAAAAACTTATTAAAAA
TAATATAAAATATTTGAATGCTCAAATAGGATAACGTACACATCTTACCTAGAACTACTG
TTTTACCTTTCTTATTAAATCAATGTATTATTAAAGCGATGGGGTTTTTTTTCTACATGG
TTATTAATTTAATATGCTGAATACTGACGGTGGAGCACAACACGTGACGAGACAAAAACA
AGCAAAACTATGACGTTTAAACAATTCAGAGCAGTATTACACATTTATTTAACATTATCA
AGGTTAATTTGACTCGGGTCCTATGAGTAGCCCGGTTAAAGCACCGGAACGATTAAAAGG
AAAGATCACATTATTTTCGTAATTGTATAAAAAAGTGCATACTTGGGTTTAAAAGTTTAA
GACTTCCACATACTCAAATACGAGTATTTATCACATAATTTTATGTCAAGTGCTGCGCTT
TAGTTTGTGACAATCTTCATCTTTAGCTAATATTGTTACATATTGTACATTCTTTGGTTT
ATTGATAACAAAGGAAAATAATAGACTAGGTACAAGATCTTCTGTAGAAGAGGCTAAAAT
GTACCTATATGAAACTACAAAGTAATCTGTTATTCAAGTATAGACGAGTGGAGTAATTAA
CAATTAAAATGAAACTGATGATAAGGAATACCTGATGGACCGATGCCTGATGTGCGCTCA
CACCACTAACCGTAAGAAAGGGTTCAAATACTGCAACATTAATTATTGCTAATATATATT
TATACATAGTTCATACTGTTATTACATGTAATTCGTTGATTGGAAACCTCTGAAAAATTA
TTCTACTTACGTAATTACTCTATTAAAAATATATAAATTATATTTTATACACTTAAAATG
TATTTTTCGGTTAGGAACTTTGGTGTTTTATAATGCGGAAACGAAAGGAAATGAAGTCAG
AATTATGTATCCGGGATTTGTAATAGAATATAAATTGGATTTTATATGATATTTTAGTAC
AAGAGAACTATATTTTACTAGATACTACAAGTTTTCGGCAAGAAGGATACACTAGGTCAA
CAGCATATAACGTGATATAGTACATGGAATATAGTACATATCTTTATGAATAGAAAATAT
TTTTACATCAAAATAGCTTAGAAGCAGCGTGCGTTATTGTCACCGTATTGTGTATAATGC
AGTATCGGACTGCCGTTATTAATTAAAGCGATCATATTTACACATAAATTCGTTATTTAC
AACAATATTTACATCTTATAGAATAAATTTCAACGTTGACTGTATAAAATAGTTTCTTAA
ACACATCAGAGATCCCATAGACGAATTATGGAATGCGTAAAACTTAAATAAAATTGTATC
TATCTAAATAATTATTACGATGCAAGATTAGTATATTAGTTTATATTTCTCTATAAACTG
GTGGAATCAAAGAATAGAACATGAGATTCTAACAGTGAGGCTACAAGATGTTCTGTAATG
TAATCTGTTATGCTCAATGGTTTGTAAGTTAAGAGACCAGCTGCAGTTCACGATCAGGGT
CGCAGGGCTCTTGCCGCAAACTTCGCAATGGGAAATCAGATCCTGTTCTAACTGTACGTG
CCGACATTTAAAGACTCCGTGGTGCGTCAATTTTTTAGCAGAAATACTCTGTAGGGCGTT
AAGCGGACTTTTCTAATGAAACGGCTAAAACTTTTCTTTGTATAGAGGTATTCAGTACGC
TCGGGAGGACGCCGAACAACAAAGACGATCAGGAATCGACACCGTTTTGTGTACATGTGA
GGTGAAGCACTATGACCGGGCAAACATTAGCTAGTTTCAATATCAGAAATTATCTGCAGT
ATCTATAGTATATGTTCTTAAGGTGTATTATTTAGTGTTTTATTACCAGTGCGTTTTTAT
TTATTAGAACAGGGAACATCCCTCGATATGAGTCGCTAGTGTGTTAATAGTTGTGTAGAT
CCAAAGAAAAGCTATTTGTATTGAAACATCACTCACTGTTGAAGTTGCTATTCTCTGTAT
TTATGTATTTAAACAGAAATACTTAATTATAATATATAACTAGTTTTAAAAATTTGAAAT
TCAATCTAGATCAAAAGGTAAAATAGTTTTAATTAGTGTAACAGCTCACTTTGAAATTGA
AAAAAATGTACAATAAAATCAATAAGATGACTATTATTAATACGTTATGGAATTATATTT
ACGTATATTAAAAAAATCTATTCTTTGTTTTAAAACTAATATTATTTTGAGTATTATACT
ACAGGTACGGGCCTTTGCGATTACAATAGAAACTATACTTAGAATTATCGCGAATTTGTA
ACGGCATTGAATGGCACGCGTTTCGGGTAATTGGCACTCAAATGAATAAAAATAGCACAT
TACAATTTACAGACTTTAGAACTAATTTGGCATTTGATTTGGTACTCAATGGCACACTCT
CCTTACAGCCGACACTAATATGAAACATAAAAATTGTACAAAATCAAAAAGTTGAGCAAC
AACCATAAAAATACCTCGTGAATACTATAGTACCCAATGAGTATCAGGTAATATTTCGTT
GTTCATAACATTGTTACCGTAATAAATATACTATCTCGTGTCTTCTTACACATACTTAAC
ATTAACGCCAAGCGTTATGTCCGGAGCGGCGATCCTAATTGGTAACCTTATTTTACATCT
AAAATAAACATTTTGGCACATAATCTATTTGGCATCGATATCGACGTAATAATCCAAGTA
TGTACTATAAGCGAAATAATAGATAAATCCAAGTATTTCACACTCTATCCCTAATTATAT
CTACTCTCTGTAAGGCTTGCAAATGGCGAACCGGTGATTCATGTGTTGGCTGTACGAACC
CGAATGGGAGAATTTCTTGAAGCATTTACAGCACTGGAAGGGCTTTTCCCCGGTATGGAG
TCTCTTATGTTCCGTGAGGTGGTGTTTGTGTTTGAACGCTTTCGGGCACTCCTGACACTT
GTGAGGTCGCTGCCCTGAATGTTCGTACTTGTGTCTGGCTAGAGAGCTCTGTTTCACAAA
GGTCTTGTCGCACTGGTCACACACAAATTGTCCTTCTCCTTCCTTGACGTCGACGTGCTT
GAGCTTGCCCTTCTTAAGTACAGTCGGTTCATCGTCGTATTCGATCGAAGGTTGGACGTC
ATCAGCCCAGGGACGGTCGTAGGACGGGCTGCCGTGCCTGGTCACGTCACTCGACATATG
CATGTTCAGGATAGGAGATCTCCCATTGGCCATGTCGTTGTACTGCAGCAACTTCTCCAT
GGGTACTAAGGGATTGAGTTTCTGGGGCAGCAAACGTTTCTGACCGTTGATCTCACCGGG
CGATGGCGACAGTCTAAAGTCAGTGAAAGAAGATGATGAGCAGTTGGAATGTGAGTAAGT
GTTGGTGTAATTGGTGCGATGAGGCGTTGTGCTACGTGACGACTTTTGACTTAAGTTCAC
AGCTTCCTCGGAGTCGGAATGTGTAACTGAAATGCTGCAAGGCGACGGCGACGGCGTGGA
GGTCACCGATTGGTTCGATTTCTTCGTGGACAAGTCTAGCGGTTGGTCGGGCGAGAGCTG
TGTTTTCGTCATTCTTCGCTGCCTGGCCCTAAAGTTTTGGAACCACACTTGCACCACTCG
ACTGTCCAATCCGACTTGCTGAGCTATGCGCTTGGATTCCTCCCGGTTCGGTCTCTGGTC
GAAGCAGTAAAATGCCCTCAGTTTGACTTGCTGGACATCAGTTAGTGCGGTGCGGACTCT
GATTTTCTTGTCGTTGTCGTGAATAGAAAGTTTATCATCGTTCTTGGAGTCTTCGTCTTC
GCTCGCACTCGCGCCGCTCTGCAAGTTGTTCCTCATCTCAGCTTCTATCCTGGTGAGCGC
CACCGTTTCCGCGACTTGCGCCGCTAAGCTCTCATGCTTTCTAAATATATTATCGCAGTG
TATCTTTTCGTGGTCTAACAACTCGTCCCTACTTTCGAAAGTGATGTTACATTTAAAGCA
TCGGTTTAAGTCCTCCGGTTCTTCCTTTATGATGACATGCGGCGTCGGAGGCGATTCCAA
GCTAGGACACACGGAGCCGGCGACCGGGGACAGCTTGTCTGCATTAGTACTGATGAAATG
TTTGGTTACAGATGCACTAACTGATTCTAATATGGTGTTGAATCTGGATTGATTATTGTC
TTCATCTTGAACATTGCTGTTCATTATTGGGACGGAATTATATTGAGATGGAGGCCTTGA
TTCACAGTCTTGATCTTGTTTCTCCTTTTTAACCGTAACTGCCTCATCATCCTCAATATC
CATGACCAGTTCAGCGCTCCCTTCTGATCTCTTGTCTTCTTCCTCGGTGACTTCTTCGAT
TAGATCTTCGGGAGCCTCGGGATTATAGTGTTTCGGGCTGGGTAGTTTCTCTATTTTCCT
TGGCGGACACTGAGATGAAGCTAATTGTTCAAAGAATTGGCTTAAGCTATATGGAGTGAT
ACCACTCGCAGGACTCATTGGTAGCCCCGGGGGCAGATAGAATGGATTAAGAGCTGGCTG
CCCTAAAGGCGGGCGGTGGAAATTACTATCTTGTGACGACATGGAAGCGAAAAAGGCAGC
AGCTTCGTTGTATTTTGGAAGGATAGGAAGGAAAGTGTTTCCGTTTGAGGGTATGTTGTT
GTTCAATTGAGATGTTGCTATTGCGTTCGCTCGCTTCCTAGACGGACTTCTGTTGGGGTT
GAGGGCAGGGTTGTTCGGTTTTATTCGGCCCATTTTAAGGTTCATGACTAGGCACTTCTT
GGAGGTCATATGACTCGAATATGAACCAGAATGTGAAAATTTCTTCCCACAATTAGCGCA
TTCGAATGGTTTCTCTCCGCTATGTATCCTGTGATGCTCTTTGAGGTGGTGTTTGAACTT
GAAGGCTTTGTCGCAATCGTTGCACTTGTACTTCCTCAGGTCGGCGCTCTCGTTGTGGCT
GATCATGTGCCGCTGCAGTCGGTACACATTCGCGAAGCTCTTATGACAGATCTTGCATGT
ATATTGGACTGTATCCACCTGTGTGCTGGGCGTGTGCAAGGTCTCGTGTCGGTCCAGTTG
CTCGCGCGTGGGATAGGTGCCTCGACACTGGCTGCAGGTAAACGGTCCTCCGGGGCCCAG
CGGGGAGCCCCCGCGGTCCTCTTCTTCTTCGGACGGCTTGCCTTCCGACCCTCCGCTCGC
CAGCGGACGAATTAAGGCCGCAAGCCGCCTGGCCGAGGTGGTGGACGTCGGGACTTGCTT
ACTCCTCATGTCCGCAAGCCAAGCGGCTGCCGAACGTTCGTACCAACCGCCAACTCCCAT
AAGCGCGCTCTGCACTTTCATCGAGCGACACCGTTCTCACACCTCACTGAACGAGACCAC
CGGCTACTATCAGATTCCGATATCGCGTCGCACAACTCGCGGACTATCAATCGCAATTAC
GTCGTACTAAACCGAGAATCACAGCCTCCGCTGACGTCAGCGGTGAAAGTTCGGGGACGG
GCCGCCGTCGAGGCACTACTCACATCGGCAGGCGCCCCACACGTTGGCCAGGCTCCACAG
GCGGTACGAGTAGCTGTCACCATAGCAGCCAAACATGCTCTCATCGGTTCTCGCGACCAT
GGCCCGCGCGCGGTCGGACGTGCAGTGTGGTGCGCGACGCACGGCGGAGTGTCGCCGCCT
CTCGCCCCGC
(6190 bp)

- SilkBase 1999-2023 -