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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69997_c0_seq1
Scaffold_idBomo_Scaf022
NCBI non-redundant
(nr)		ATP-binding_cassette_sub-family_B_member_3_[Trichoplusia_ni]
Ontology
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005919 C pleated septate junction
GO:0006810 P transport
GO:0006855 P xenobiotic transmembrane transport
GO:0008152 P metabolic process
GO:0008559 F ABC-type xenobiotic transporter activity
GO:0015562 F efflux transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031427 P response to methotrexate
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042908 P xenobiotic transport
GO:0043190 C ATP-binding cassette (ABC) transporter complex
GO:0055085 P transmembrane transport
GO:0060857 P establishment of glial blood-brain barrier
Transcript
Level		FPKM:2.33 TPM:4.06
ORF EntryO_BomoEE20369_complete:A_BomoEE_comp69997_c0_seq1
Sequence
(Nucleotide)
GGTTAATTTACTCGTCGAGCCCTTGCCGAGGCTCGGCGAGGACAGTGACCGGTGCTTGAG
GTCCCTAATTTGCGTGAGTTAGTAAACTCGCTAAAACTGCGTAGACTTTGTAAGATCAAG
CGGTTCAAAACAAGTCGTGCTCGCGTTTTGATATCTTCCTTTCGAAATTCGATCGATCGA
TTGATCTAAATTCGAATGTTGACAGTTGGCATAACAGTTGACAATTTTTTGATGTCACTG
TTTTAATGGAAATATAATAAAATGTACATATTTACAAACACGTTACATATTAATCTAAAG
TAAATTCAAAGTGTCGTAGAAAATTTTGAATCTTTTTTTTTTCTTATAATTTTAAGCTTT
CGATGTTTTTAGTATATTAATAAAATGTCTCAACGATACACTTTTGTCAATAATTTTTTT
TAGTTTGCAAGTCGTAAAGGTCGGTATCGGTTATTTGAAATGATAATAAACAATTTATGT
TTATTTATTTACGCATATAGATTGTTTAAGACATGTTATAATATAAATATAGTGGACCGA
TTAAGACTTGTGTATAACGCTTGCGTTTACAAAGTTATTGATAAGATGCATATCTTCAAT
ACGGTCATACCAAATAGTTAACCATTGATTTTATAATATTATAGTATAATTTTGTTAATA
CATATATACTACATATGTTTGTTATTTTGATTTATTGAATTTTATTACGGTCCGTGATAT
TTAGTTAAAGCGTTCAGACATTTCATAGATATAAGCGAACTTTCTCTGTTGCAATTTAAA
TGTTAGTTACAAGAACGTAGTTTTAAGTATATAATAAAAATTTGCATCTAATATAATCTA
ATATGTCTTTGTACGTAAATATATGTTTTCGATCGATTTTTTTTTACAGAAAGTGTACTA
CTGCATCGGATAGAATTTATAAACTACGATAATAAATTATGAACGGAAACGAAGGTTTGT
GTATTGTCGAGTTTGAATACTTTTTTATTAGTATTTCTTAAATAAATACGAAAAATAAAG
GAACATGTTTTTAGTGTTGGAAGAGCGCTGATGATCTTTAAAGACCTGGTTTTCTATTGA
GTTTCCTAAATCTATCCATCAGCTTGGAAGCTCTCTCATATGCTAGATAAATTTACTGTG
AATGGTCAAAGAAGCGGACCTCAATGCGATGAGTCTTCTTTAAATTTATAACGTAACTTT
TTTTAATTTAAATAATGCATTATCTTGATAGATGTAGTCGGAGCACACCAATGTAAATAT
TTTATAAACATCTGGATTTGAACATATAATTTATTCATAAAACGGAAAACAACACGGTAT
CGGTTCTGTTAATGTAAAATGGAAATAAATGAAAAACCATTGAAATCAGTCGAAATGTAC
TCTTATTTCTAAATTGAGTTGCTTACATTCTAAAATTAAAAGCTAAGTAGCCTGTATGCA
GAGAACTTTGTTAATTTTTAATCGGTTACTGCGATCATGAACTTTATCAAAAGTACATGT
TAACGTAAATGTTTAAATTTCACAATTTAAGACATTTCATTATGTTATCTGTATGCTATT
AAAATTGTTTTAAAATTTCTTCACGTGACGTTTTGCTGTTTACTTAGTTGCCAGTAATGT
CCCTTGAGGCCAATGAGCTCTGCGTGGTTGCCTTTTTCTACTATTTTACCTTTATCCAAA
ACACAAATGATATCAGCGTCCTTGATTGTAGTTAGACGATGAGCTATAGTAATGCAAGTT
CGGCCTTTGGCTGCATGATCCAATGCCTCTGTTACAGCCCGTTCACTGTTGGCATCCAAA
GCCGAAGTTGCCTCATCCAAGAGGAGTAGGCGTGGTGATCTGATGAGGGCCCGCGCTATG
CACACTCGCTGCTTTTGTCCTCCGGATAATTGAGCACCGCCTGCTCCTAAGTTCGTTTCG
TAGCCCTTTGGTAAAGATACGATGAAATTGTGTATATTGGCCGCTTTAGCTGCTGCAATG
ATTTCATCCATAGTAGGTTTGCGACTGTTGTCACCGTACGCGATGTTCTCTGCGAGGGTG
CGATCGAACAAAATGGGTTCTTGTTGCACCACCCCAAGTTGTTTTCGGAGGCGATTCAGT
GTTAAGCTTTTCGTTATATCCACACCGTCCAATTCAATATTTCCAGTTGTGGGATCATAG
AATCTCTGTATAAGTTGCAACACTGTTGATTTTCCGCAGCCTGATGAACCAACAAGGGCA
ACAGTTTTGCCGGCTTCTACGTGCAAGTCAATACCTTTGAGAATCATCTGATGTGCTCGA
GTAGGATAACTAAATTCGACATCGTTGATGCTGAAATTTCCTGATGCGGACCAATCCTGT
TTATCGTTGAGACCGTCTACTGTTCTGATTCTCGGCTCTCGGTTTATAATAGATAAGATC
CTTGCACCGCAAGTTTTTGCCGAATTGAAGCTCGGTGCGTATACTAATGACTGACCTAGC
ATGTATGCTCCGTACATCACTGCTTCAGTAACAAGTAAAACAACTTCGTATTCGACTTCC
CCGTGGGCGACTAGAACTGCTCCATAAATGACAGCGCTGCAGTAAGACAGCAGTGGAACG
TAAATACACAAACCAAGGACTAAGCCCCGCCAACGACTCTTCTTCACGACAGCTGCACAA
GCGTCTATCAGTGCGTCTTGAAATCTTGTAATAAACAAAGATTCAATACCTAAGCTCTGA
ACGGTTTTGATGCTAACTACTGCTTCTGTTGCGATCGCTGTAGCAGATTCCATTGCTTCT
CGTTCATCTTGCTGTGATTTTTGAGACATTATACCTTCCAACCAAATACTTCCAACCATC
TAAAATTAAAACAATGCCTCAAGGTCTTTGGTTCGTCTGAAA
(2862 bp)

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