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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69993_c2_seq12
Scaffold_idBomo_Chr27
NCBI non-redundant
(nr)		PREDICTED:_collagen_alpha-1(III)_chain-like_isoform_X6_[Bombyx_mori]
Ontology
GO:0001105 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0045944 P positive regulation of transcription by RNA polymerase II
Transcript
Level		FPKM:6.76 TPM:11.79
ORF EntryO_BomoEE20343_complete:A_BomoEE_comp69993_c2_seq12
Sequence
(Nucleotide)
GCCGTATCATTAAAAAAAAAAAAATAAAAAAAAAACAAAAAAAAAAAAGGGCCTTATCAT
GAAGTCAGTAAGTTTCACAATAATCATTGTGACCTACGAACAACTTAACAAATTGTGTCA
GAATCACAACCAATAGTTTGCATCTTAATTTCATCTCTTATTTAATATTACACAAACTAT
TATTATATCATTGCTCTTCACTTATCCTAAAAACAAGAACCATTCTTTACCTTAAAATTA
ATAATTACATTTAAATTACGACTATCTAATTGCTAGCGGGTGTTTCTTACTGGACTGTTG
TGCTTATACTCACAATAATTCCACTCTCTACTAACTTCTGAGATCTTAAGCTGCATACAG
ACTGTATGAACACACAAATATAAACTAGAGTTTATCATAGACAAAAATCTATGCACTTTA
TTTCTATCATAATGTGTGTATCTTCTCAGGTTTAAATTAAATTGTAACAATGTATAATAA
TTTCTGACGATTCAAATATTCTTCCAAATTCTGAAACGACCTTATAAGCTAAACAACAGT
CTCAATCTCTCATACAATTTACGCACACCAAGCATTCGTCATCTTGACTAATTAACATTT
CAGAATAACGAAGAATAAATCAACTAAATAAATATTATCTCTGTATGCTGCACAGTCAGT
ATACAACTTGAAAATATGTCCACACTATCGAGTAGGCGTTTGCTTTTTTTTTTTTCAATC
GTAAAAAAACTTCTGTGAGTACGTTCAATTTGAAAAAATAAAACATTTAAGAGTAATATT
TATACAGAAATACGTCTATTCGATAGTGAGATACGATCCTCGTACGACAGCAGAGAGGCG
ACACTGACGTGACGTCACGGCTGCGTCTTCCCTCACTGTACAACCGTCACCATTCGAAGC
CTGCATCCGCCGGGGTTCATTGCTTTACAAACAAGGCATTAGTTCATCAAGGCCACTGTG
ACATCCACAATGTGCGACTACTAGCCTAGCATATTAATATGTCCTATGTACTATCGAAAT
AAAACAGTGTTGCGTTCCATTATTGGCATTGTTCGTACAGAATTACAGTTAATAAATTAA
AATAAAGACGGTTAATAATATCACGAAATAAATTCACGTGGCAAATAATATGGCAACAGA
CGATTTAAGTACTTTTAAACATTAAAAACAAAAAAAAATACTATTTAAGACTTGCAAATA
GGCAAGTACTAACCCCACTTTCGGAGCGTAAAACAATTGCTGCACTCCACTATTTTGCAT
CATAAAGTCTAGTATATGTACTGGAAGACAGAAAAACGTTGCTACTCAGATCAAAAGAAA
CAGTCATTACAGCTGGTACACAAATTCCAGAGTCGTGCTGGCCGACGCGACGAGCCGAAA
CGTTACATTATACGAATTTCATTAATAGAGTATCCGTAAAACTAAAGCGGACAAAACATA
TATGTTAATGTAGTTGTGCGTCACTCCAGAGTCGAGCGGAGACCTCGCGTCCCGGGTCGG
GCTCCGGTAATTTCAAAATTGACTAGATATCTGTGTGCATAGGAAACGTACGTAAAACAG
CTAAGTAAAGGAACCGATACACTGAAGGTCTGGCATGTCCGTGTAAAAAATACTAAAAAC
TAATTTTATTGCTATCAGCAAAAGTAACGTTTAAAACTGTAGTTCAAAGAACGCAGAGCG
GAGGGGGTCGCAGTCAGACAGGCGGCGGCGGTCATCACTTGGGCGGCTGGTAGGGCGGGT
AGGGCTGGTGCGGCTGCGCGGCGCGGCTGCCCGTCGCGTACAGCTGCTGCTGGAAGTTGT
GGAACTGGGCTGCGTACGCGGGGTCCTGCGGGGACGGCATGAAGCCCTGCCCCTTGAACG
GCGTCGGAGCCACCGAGGGCGGCAGCGGCTGGGCGGCTCCCACGCGCTTGCCGCCGCGGA
ACGTCGCACCGAAAGACTCCGGCGACATCTTGGGCGCGTCGGGGAAGCCGCCGGGGTAGT
GGTGCGGCATGCGCATGGGCGCGCGGTACGGGCCCTTGTCCAGGGGCATCGGGTTGGCGA
CGCCGCGCAGGAACTCCAGGCTGGGCGGCGCACGGGGCCCCGCGCACGTCAGGGCCGCGC
GCGTCGGCAGGTATTGGATGGTGTTGGGTGCGCTCGCTTTCACTTGGACGTTGGCGCCGT
TGAACGACATCTTACCGCCGCGCGCGCCCAGCATGCCGTCGGGGCCCATTCCGCCCCCCG
GCCCGCCCATAGGACCACCGCCCATCTTTGGGCTCAAGCTCATGTCTCCGGGAAAATCAC
CTCCACCCATCATGCTTTCCATCGGCCCGCCCATTCCGGGTCCTCCCATGCCGTCCATGT
GGCAACCCAAGTCGTTGATCATCATGTGGGGATGCGAGTGAGGGTGCATGGCGTGGTGAT
GCTGCACGTGATGCGGTCCGAAGGGCCCCATGTTGTTGGGGGCGGGCGGCATGGGCGGCG
CCCCGCCCACCGTGTTGGTGAGCTGCTGCGACATCTGCGCCAGGGACGAGATGGGGTCGA
AGGAGGAGGTGGCGGGTCCGAGCGGTCCGGCGGGTCCCTGGTTGGGGTTGATGGGGATGT
TGTCAGGCCGCCCGCTAAGACTGCACGCACCAGGGAACCCGCCCGGGAGACTCGTACTGT
TCGGACCCCCTGATAACGTAGGACTCGGCGTGGTGGAGGCTATACTACAGCTGCCCTTGT
TCCCGCAGGCGGCTGACGATGAGGGCGCGTAGGGTCCCTGGTTGAGTCCCGACTCGCGCT
GAGGCGTCTTCGATGCGCTATCTTGACTTGACCTGTTCGACGACGGACTGGGCCTTGATT
TTTCATCTTGTCCACACTTTGTATTTGATACAGACGTAGGTGTCTGCGGATTATTGAATC
CTGGACTTTGTTCCAGAGAAAATCTTCCTGCTCTTTGTTCAGATAACGACGAGTGAGGTT
CTGGGGTCCCCGGCATCATTCCAGCTGGTGACTTTTGATTTGAATTTGATTGTGGTGTTT
GTCCTCCACTGTTCGACGGGGGTCCGTTGTCTTTTAAAGACGTGTTCGGCTGTTTTTGTA
TCGTTAATTCTTGTCCTGGCCCGTCCTGTTTGGGTCCCGGCTTGCAGTGCGCCGGACTGT
TGAGGCCCGATCCTGCCCGGGACGCCTCAGCTGACATTGGCATCTGTACGGAGCCGTGAC
CCGGGGATTGTGTTGCTATAGGCACTGAGGCAGAGCGGTGTAGGGGTGAGGCACCATACG
GGGGCGGAGGCAAACAGCTTCCTCTTTCGGAACAAGGGGACTTCACTTGCGTACTTAATT
CGGTGTCCATAGATTTAGGATCGTCAAAGAACTGATGTTGTAATTTTTGCCAGTCGATAT
CCGGACCGCCGGGACTCTTGGGGCTGCGCAGACCGGGCTTGTGGCCCAGTCCCGGAACCA
ACCCTGGACCCAGCCCGCCGGGGTCTCCTGGACCCATATTTCTTCCGCGTCCGTACTCAT
CGCACATAGGTCCGTTGACGGGCACTCCGTGGTGGTCGGGACCGCAGTCGCCATGCGGCA
TCATGCCTCCCATCATACTCCCATCCATCATTATACCGCCGTGAAACCTACCGTTCATCG
CGTTCAGATTGGGCCCAGGTATCATTCTGGGTCCCATATGTGGTCCGCCCATCATACAGG
GCTTAGGACCTCCCATACCTCCCATTGGGTTCGGCATACGCCCCATAGGTCCCCCACAAC
CTCTACCCATATGCATGTCTGTGCACATTCCCGATTTCATGTCAGGTCCTCCACATGGTC
CACGAATTCCTTTCATTCCACATGGCCCCAGAGGTCCCATGGGACCATTAGGACCCATAC
CACCCATCATGGGTCCATTAGGCCCCATCATTCCATTGGGACCCATAGAACCGTGACCCA
TTCCCATACCGCCCGGTCCACCCATGCCACCCATCGGCCCGCCAGGGCCCATGTGACCTC
CCATAGGGCCATTTGGGCCCATTGGACCACCCATAGGTCCATTTGGACCCATTGGGCCAG
CCATTGTACAACTTGGTCCAGAGTTCATATTATTTGACATCGATACCATGGGTCCATTAG
GCCCAGGTCCCATAGGGCCATTAGGGCCCATTCCAGACATTGGTGGAAAGGGCATATTCA
TATTTGCCGTAGAATTTGGAGGGTTAATATCGTTAGGCGCTTGCGAGTTGTCTCCTGAAC
CTTGGTTGACATTGTTTCCTCCACTCTCAGGGAATAACATTTGTTGCATTTTTCGTATCG
TTGCAAGCTGCTCTTCGCGATGCGCACGCTGCTGTGGCGTCAGGTTCTCATCTGGTATTT
TTACGCCTTTAGGTCCAGTTTGACAATCTCCACCATCTGCAGAGCCTGAATCGGGCGGTT
GGCCCGATGCTTCCGAGCATGCAGGTAATTGTCCCGGACCATTTGACATGCCATTAGACA
TTACAGAGGGGTTTTTGGTGTCCCAGGGCATTTCACCATCAGCACCGAGGCCGTCCATGA
CACCGCAGGACGGGGTGCTTCCTGGAAACCCATCCATGGGACCCATACCAGGACCCATTT
GACCCATCTGTCCAGGTCCACCTTTCATCATCATCATTTGATTACCTGGTCCACTCATTC
TGTTTGGCCCCATCATACTAGGACCCATATGACCCATTCCACTGTGACCCATCGGCCCCA
TGTTGGGGCCCATAGGTCCACCCATCATATGACCCATTTGATTGGGTCCTCCAATCATGT
TAGGCCCACCTCGCATTCCACCCCGTGTTTTTGCCATAGCTAAATTGTTCAACCACTGAG
CAGGACTTTGTTTATTGAACTGACCAATTTTTAATGGGTGTTTCTCTAAGTATTTCTTAG
TTGCAGGTTGAGCACAATGGTATGCAATAATGGAGTGGTGCTGACCGGAAAGCACTGCTT
CTGCTCCTTTATTTGCCATCATTGTAGAGAATACGAAGATTTGACTTTGCTCCATGCTGC
CAGACTGCTTGCTCATTACATTCGACGGAAGTGTTTGTGCTTCACTAGCAGACATAGGCC
CCATAGAAACCCCAGGACCCATAGGCCCTCCACCTCCCGCCATTCTACACGAACCCATGT
TATCTGGGCCATTTGGATTACGACAGTTTGGGTTTCCATCCTGAAGATTATTTGTCGAGC
TTCTGAGGCCTGTCTGTGGATCCAAAATGTCGTTCGAGTCTGAAGATAGCCTTTCTGATT
TTAACGAGCCAGGTCCACCCAGTTCGCAGGAAGGTGATTTTGTTGGGTCACCGTCGCTGT
CCATGAGGCCGTCGATCTCTGTTTTAATGCCGTCAACTCCAAGGTCTGACGCAGAATCTT
CGCCAGAGGGCTGACTATGGGGTTCTATCTTCACACGATGCGTGTCTTCTGGTTCTTTCT
TCAGCGCCGCCGGAGTGGGCAGCGACGCCGAGGGCGGACGGGAACCGTGGCCAGGCTCAG
CAGGGTCACTGGGCTCGTCCTTGAGGCGGGCACCTCCACCCTTCTCCTTCTCCTTAATCA
TACCTCTGCGTGCCTTCGCCAACTTGAACGATTACCGCCTCACGACGGATTCACTTGCAC
TTGATGACACAAAACACTGTGTTTTATCACATTTATGTAAGTCTCATCGTATTATAAAAA
CCAGATTTTAATAAAATTCTTTCTATCAGCATTAACACAAATCACCACGCACACACAACA
CAACATACATATATGCGACAACACTAGCGACGGCCATCTTCCGA
(5744 bp)

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