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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69962_c0_seq5
Scaffold_idBomo_Scaf126
NCBI non-redundant
(nr)		PREDICTED:_Usher_syndrome_type-1G_protein_homolog_[Amyelois_transitella]
Ontology
GO:0001917 C photoreceptor inner segment
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007605 P sensory perception of sound
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030507 F spectrin binding
GO:0032391 C photoreceptor connecting cilium
GO:0036064 C ciliary basal body
GO:0042472 P inner ear morphogenesis
GO:0042803 F protein homodimerization activity
GO:0045494 P photoreceptor cell maintenance
GO:0050953 P sensory perception of light stimulus
GO:0050957 P equilibrioception
GO:0060113 P inner ear receptor cell differentiation
GO:0060122 P inner ear receptor cell stereocilium organization
Transcript
Level		FPKM:0.81 TPM:1.42
ORF EntryO_BomoEE20151_complete:A_BomoEE_comp69962_c0_seq5
Sequence
(Nucleotide)
GAGGTCGAAATGTCAATTGTATTGGCATAACGACCGACTTCCAAACCGCAGGATGCTACT
TACCAGTGGCAAAGTGATTTATTTAAGCTAATTTATAATTGTTTACACATTTATCACAAA
TTACGACAAAACACAGCGACTATCCACTATAGAAATCACAAATAAATTAAATACATGACA
AATTTAATTTATCAAAACACATCGTTGTTCCGAATCGGTCTCATCACGGCGAATGTAAGA
ATCGATCTAGAAAGATCATTGGAAGACACTTGTTTAAACACATCCAATACTATATTATAT
TAAGTACATTCTCATATTTATAACTTCAGTTCCATAGAGTGACGAATTTGAATTTGAACG
TAATTGCGACAAATCTAGTTATCTTATTCAGTTAGTAACCTAAAACTTTCACAAGTTATT
ATTACCTATTTTTTATACTTTAAATTACTAGAGAAACTCATTATTATTCATACAAATTTC
CTTTTCTTTACTACTGGATTCAAATAGTTATAATTTAAAGGGAATCTTTATATATGTTAC
GATACAAAAACCGGACCGCAAAATTGATCTCTTTCCCAAGGTGATCCTAGGGAAAGAGAA
GCTGTTGACGTATAGATCAAACATCGCAGCTTCAGTGTTCTACTGGCAGAAATAATTACG
GTTTAGGCAATAAAGATTTCCACATACCCTGACTTGTAGATCTGATCATCTTTTGCTTGA
GCGCTATTAGCACGTTGCTGGGCCGATGTGGCATAGTGGACACCTCCTCACCATAACCCT
GTTCCCACTCTTTGGCCAGCTTCTTCATTTCCTTCTCGGCCATGAGATCAGCTTTGCTCT
GTCTTTTCTGATACTGCTTCTGCGATTTCTCGTAGTCTTTTCTGGCTTTCTCTTTGAGCG
CTTTCGATTTCTTCTTATCATTGTTTTCTAGTTTTGCTGTAGACTGGTCCAGGTACCGGA
GTATATCCTCTCTGCCATTAATAGCGGCCAGCTCCTGAGCGGAGTGACCGTCGACGTCCA
TAGCGTACACATTAGCTCCGAAGTTGACCAGGAAAGTCACGCATTCCTTGTGACCCCGGG
CCGCTGCTAGATGAAGGGCTGTATTGCCGAAATAGTCGGCCTTGTCTGGTTCACCGCCTC
GCCCGCATAGTAGTCTCAGGGCTTCTATGTGTCCTTCGAAAGCAGCCCACAGCGTGGGAG
TCATTCCAGATTCATCTTTATTATTGCATTCTTTGCGTGTCGCTTCCCGCAGTACCTCCA
GTAGACCATCTTTGGCTGCTTTGTGGAACCTGTCCGTGGACATTTTTGTACTTCTTTTTT
TTTCACACTACGAACAATGATTTGAGATCCAAACGAGGTCCGACAAAAGTTTATTCAACT
CATTTTTATCAATTCCATAAATTTAACACATAAAAAATTCCTAAGGGAAAGCTCTTTATT
TTAACTATATTTTTAAACTTAAATATCAGATAACTTGACAACAAAATTATTTAATTATAT
ATAGTAGTGATATAATTGATTTATTTAAATTTATTTTCATAAAATGATGTGCACAAAAGT
ACTTTTAATTCAACGCGAAAAATAATAACAATCTCCTAACAGAATAACCGTCA
(1613 bp)

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