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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69962_c0_seq1
Scaffold_idBomo_Scaf126
NCBI non-redundant
(nr)		PREDICTED:_Usher_syndrome_type-1G_protein_homolog_[Amyelois_transitella]
Ontology
GO:0001917 C photoreceptor inner segment
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007605 P sensory perception of sound
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0030507 F spectrin binding
GO:0032391 C photoreceptor connecting cilium
GO:0036064 C ciliary basal body
GO:0042472 P inner ear morphogenesis
GO:0042803 F protein homodimerization activity
GO:0045494 P photoreceptor cell maintenance
GO:0050953 P sensory perception of light stimulus
GO:0050957 P equilibrioception
GO:0060113 P inner ear receptor cell differentiation
GO:0060122 P inner ear receptor cell stereocilium organization
Transcript
Level		FPKM:1.70 TPM:2.96
ORF EntryO_BomoEE20148_complete:A_BomoEE_comp69962_c0_seq1
Sequence
(Nucleotide)
GGATTTTCTATAAAAGCGTATTTCTTTTAAACTATTATTTATTTTATAATTGAAGTACTA
CTGGTAGTCCGGACGCATGGGCTCAACCAGGAGGGAGTCTACTCACCTAGAGGTAGGCCG
AGCGATTTCATGTCGCTCTCGGTCAGCAGCATGAGCGCTTCCAAGTCGATTTGTTCGTCT
CGAAACTTCTGCACGTACTGCGAGAGGCCCCACGCGGTCAGGAAACGCTCTAGGGACGCC
GAGCCGGACTCATCGGCCTCCCCCTCCTCGTCCGAAGTTATCGTCGAGCTCTCTGAGTGC
GGCTCGGTCCACTCGGCGGGGCGGTAGGCGGTGCGGGGGGCGTGGCGCGCGGCCAGTGAC
CCCGCCGAGCCGATGGACAGGTCCTCGCCCGGCGCGCCCGGCATCGCGCCCAGCGTGGCC
GTTATGGACCGTCTAAAGGCTACACTCCCGAATCCTGGTCTGTCGAATATACTGGCGGGC
TCTTGCAGCATCACCTCCTGTCCTATGCCGCTGTCTTCTCCAGACAGAACCGTGAAATCC
GGTTGACTTGCCGATCTTGTCAGTGGCGGTTTCTTCTGATCGGTGTCCTCCGTGAACACG
TCGGTAACGTTCCCCCGGTGTTGCGGTCCCGCGCCCAACGTGCCCACGTACATCACTTCA
CTGTCGCGACGGAGCCCGGATAATGACGTCAGAGAACGACGACCGGTCGTTTCTAATTCG
CCAACCTTGAAGTCATCATTCGGTCCATTACGGCCGATCGTGTTGTTGCGCAGTTTGCTG
GCGAGGGCCTTCTTGTAGACGGCGCCGCGGCCCCGGACGCCCGAGTTCACGGTGCCGACC
AGCGTGCTGTACGTCGGGCGGGGCTGCTCGTCCGCCAGGAGGTTACCCTGACTTGTAGAT
CTGATCATCTTTTGCTTGAGCGCTATTAGCACGTTGCTGGGCCGATGTGGCATAGTGGAC
ACCTCCTCACCATAACCCTGTTCCCACTCTTTGGCCAGCTTCTTCATTTCCTTCTCGGCC
ATGAGATCAGCTTTGCTCTGTCTTTTCTGATACTGCTTCTGCGATTTCTCGTAGTCTTTT
CTGGCTTTCTCTTTGAGCGCTTTCGATTTCTTCTTATCATTGTTTTCTAGTTTTGCTGTA
GACTGGTCCAGGTACCGGAGTATATCCTCTCTGCCATTAATAGCGGCCAGCTCCTGAGCG
GAGTGACCGTCGACGTCCATAGCGTACACATTAGCTCCGAAGTTGACCAGGAAAGTCACG
CATTCCTTGTGACCCCGGGCCGCTGCTAGATGAAGGGCTGTATTGCCGAAATAGTCGGCC
TTGTCTGGTTCACCGCCTCGCCCGCATAGTAGTCTCAGGGCTTCTATGTGTCCTTCGAAA
GCAGCCCACAGCGTGGGAGTCATTCCAGATTCATCTTTATTATTGCATTCTTTGCGTGTC
GCTTCCCGCAGTACCTCCAGTAGACCATCTTTGGCTGCTTTGTGGAACCTGTCCGTGGAC
ATTTTTGTACTTCTTTTTTTTTCACACTACGAACAATGATTTGAGATCCAAACGAGGTCC
GACAAAAGTTTATTCAACTCATTTTTATCAATTCCATAAATTTAACACATAAAAAATTCC
TAAGGGAAAGCTCTTTATTTTAACTATATTTTTAAACTTAAATATCAGATAACTTGACAA
CAAAATTATTTAATTATATATAGTAGTGATATAATTGATTTATTTAAATTTATTTTCATA
AAATGATGTGCACAAAAGTACTTTTAATTCAACGCGAAAAATAATAACAATCTCCTAACA
GAATAACCGTCA
(1812 bp)

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