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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69947_c0_seq3
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA-processing_factor_39_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000243 C commitment complex
GO:0000395 P mRNA 5'-splice site recognition
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030627 F pre-mRNA 5'-splice site binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_BomoEE20087_complete:A_BomoEE_comp69947_c0_seq3
Sequence
(Nucleotide)
AGGTGAGTTTTTTTTTGGCCGTAAATAACATATTAAATTGTTTAAGTCACTTGGTGTGTT
GGTAAGGCTTCGACACCAAAATAATGAGTTTTATGTCAATATCTTAAACTCTTGGATTTT
TGTAATATTTGGTCAAATATGGTATTTTGCAATTATTTTTTTTCCCAACAGTGCAACGAG
GTCTACGATGTTCGTATACGAAAGACGTCAGGTCACACCGGAGAGTTGTATAACCGTCAC
ATAGATATTGTTTTAATTATACTTACGATAAGGTGTATTGTTTGTATTCTAGTGCTTAAG
TTTAATACAACTTGTACATGCATGATGTATTGTAATACATACTTTATTGTATATATAACT
AAGTACATAATGATTTATGGATAATTAAGATGAAACTAATCCATGAAAGCACACTAGCGT
GGATCACAGCGGTTCTCCATATTTAGCCATTTCGAAGATCACGGCGAAGACAGCGAGCCC
GGCAGCGTCCATTACGAACAGGTTTTGGAAAGGGGACTTAAAGCTATACCTTTATCCGTA
GACCTCTGGATACATTACCTCAATCATATAAAAGCGACTAAAACCGAAGACCATGCGTAC
ATCAGATCTCAGTATGAACGAGCCATAGATGCATGCGGACTAGAATTTCGCTCGGATCGT
CTTTGGGAGTCTTACATCAAATGGGAAGCGGAAAATGGTTCCGCTCTCAATGTCACGAAT
ATCTACGATCGTCTTTTGGCAACACCCACCTTAGGGTACACGTCACACTTCGACAATTTC
CAGGAGCACGTGATGTCGGAGCCGGTGACCGGCGTGGTGAGCCACGCGGAGCTGGTGCGG
CTGCGGGGCGAGGTGCGGGACGCGGCCGGCGCGCAGCCCAGCCTCGACCTGCCGCCCGGG
GAGGACGAGCCCGTCGACCATGTCGCATCCGATGAAGAGGCGCAAGCCATCAAGGAACGG
ATTGTTGCAGCTCGAAGAAAAATTCATAAAACGACCGGCGAAGAAGTAACTGCGAGGTGG
ACTTTCGAAGAAGGAATCAAGCGGCCTTATTTCCACGTGAAGCCCCTGGAACGTTGCCAG
CTAAAGAACTGGAAGGCGTACCTCGAATGGGAGAAGCACCACGGTTCGTTCAAGCGAGCC
CTCGTGCTCCACGAGAGATGCCTCATTGCATGTGCCTTATATGAAGAATTCTGGATGAAG
CTTATAAAGTTTCTGGAAGAACGTGCTGAACAAGATCCTGAAGTGATAGCAATAGAACGG
GAAGTACTAGAGCGAGCCTGCACAGTGCATCACCTCGACAAGCCAGAGCTCCACCTACAC
TGGGCACACTTCGAAGAGGTGCAGGGCAATACACTGAAAGCTGCCGAGATACTTGATCGT
ATAGAGAAAACCTGTCCCAATCTCGTACAAATACAGTACAGGCGAGTGAACCTCGAGCGA
CGACGCGGCGACTACGAGAAGTGCTCTCAGCTATACGAAACGTACATCAGCACTTCGAAG
AACAAGTCGCTGGCGTCTGCGCTCGCCATCAAGTACGCGCGGTTCCTGCAGCACGTGCGC
CGCCAGCCCGCCGCCGCCCGCGCCGCGCTCGACGACGCCGTCGCCAAGGACCCGCTCAAC
CCGCGCCTGCACCTGCAGAGACTTGACCTCGCCATCAACACTCCCGGCGTCACCTACGAA
GAGTTGGATGAGCTGGCACAGTCGTACTCGAGACAGGAGGGCGCGGACACGGAGGTGAGC
GCGCACATGGCGTGGCGCCGCCGCGAGCTCGCGGAGGAGCTGGGCAGCGCCGCGCACGCC
CGCGCCGCACACGCGCACGCGCGCGCTCTCGCCAAACATCTCCGCAAGCGCGCCCGCAAA
GACAAGCACGACCCGCCGCCGCCGCCAGCAGTAACTGATTCTAAGAAAAAAGAGAGTACG
GCAACCGCCAATTCTGTTCCGACGACGAATGCGAATTACTACGCGCCGACGACAAACACG
CAGTCCTACGACCAGTCGTACACGCAGTCCTACCAGCCGACCTGGGGCTACCAGCAGCCC
CCCGGGCCCTACCAACACCACCCCCACGCCTGGCCGCAGTATCCCAACTACTATTAGTAA
TTTGAAGAACATTCGTGATGGACGTACGAATCAGTACATACTTTTGATTTCAGTCACCTT
TTTCTCCATGTATTAGGTTAGGTTAAGATTACGTTTACAATTAACTTTAGAATGTAGCTA
CAGGCTTTAGATAAGAATTATAGCTACTATATTAGTAATTAAAATAATTTGTTTGGATAA
ACGTATGTTCGTGAAACATAATGTAGTTGAGGTCGGATTTTTTTATAAATTAAAAACATG
GATATTTGTGACTGAATTCAAAGGTCCAAAGGGATAATGAGCTCATCAGGCCGACAAAAA
ACTGTATCTTGACATAAAAGTAAAATAAATGTATTTTGTAAGTTTTCTAGAAATTAAATG
ATTGACAGTGGGTATTAATTTATTTTTCTATACTTTAAATAAAATATAGCTTTTGTTTAC
TAAATTATGTTTTTACTGGCAACACATACAATCAATTTGAATAAAATTTTAAATGATTTC
AAAATAGTTTGCTGAACTCATACTCGCTGTATCTACGCTAAACTCTCGTATCATAAAGAG
CCGCTCCCGAACAAAATCAACGTCATAGACTAATGGATAAATAAATTGATGATTAATTAT
AAACTGATCAACGAGGTACAAATTCAACTCAGTCTCCTAAAGTTCGCTTTCTCGTTTTGT
TTTAATTTATATCTTCTCTTCTGTATCTTTCAACAACAGTCGTAAAATGTAAAGCATGTG
TTTACG
(2826 bp)

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