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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69911_c0_seq13
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		PREDICTED:_R2D2_protein_isoform_X1_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0008298 P intracellular mRNA localization
GO:0010494 C cytoplasmic stress granule
GO:0016020 C membrane
GO:0030425 C dendrite
GO:0030529 C ribonucleoprotein complex
GO:0036464 C cytoplasmic ribonucleoprotein granule
GO:0044297 C cell body
GO:0044822 F RNA binding
GO:0045070 P positive regulation of viral genome replication
GO:0046726 P positive regulation by virus of viral protein levels in host cell
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:5.91 TPM:10.31
ORF EntryO_BomoEE19971_5prime_partial:A_BomoEE_comp69911_c0_seq13
Sequence
(Nucleotide)
AGAGTGCAGGGGAGTCGTTTAGTGCGGTAGGGCCCTAAAACATTATTGTTCCCGCGGTCT
GCTTCCAACATCAGCAGATCGTCAAGTCCCACAAACCTCGCGCGCCCCTAGGCGCGAGAA
TCTCGTAGGAGGTTTGACCCGGCCCGAAAAAAAAGGTACATAGGTTTGGTTAGGTAGATT
GGTTTGTTTGGTTGGTACATAGGACCCTCACAAGTTGTCTCCACTTGACCCTGCCTTGCG
CCAGCTCCTTACGATAACTCCAGGTCATGCCGGCAGTTCTCATCTTGCTCTCAACGGTGT
GTCGCCAATGTGTATACAAATGTGCCACCAGATCTTCACCTACTACGCAGTGGCCCCTCA
AACGCGATCGATGCTGCATTGATTCTGCTGCTCCGTCGTGTGGCCTATCCAACGCTATTT
CCAGTTGGCAATGTCTTGCACGATGGGGACCTGGTCACATTCAGTCCAGAGATCTTCATT
AGAGATAGTGTTTAGCCAAAATATGCGGAATATCGACCTCAAGGTCTTATTTACAAACAA
AATTAATAAGGGTACATTATTAAAATTACAGCTTTTACTGTTCCAGTTTTAAGCTTTAAA
AATCTAACAACAAGATGAAAACTCCCATAACAGTACTGCAAGAAATGATGATGAAACTTG
GACAGATTCCAGAGTATGAATGTGTTGCTCAGGTATGAATGTGGGTAATTAAAATTGAAC
CTCACCTTAAATTGGTGTTATTTTGTAGACAGATGGGCAAACAATTAACCTTATAGTGAC
TGGTCACAGTAGTTCTGGGAAATCAGCAATTCCCAGAGCACAGACTAGCAACTGCCTGCC
TCTGAAAGGTCTTCTCAAATTTTGAATAAAAAGTTGCAGCAGGTGTGCTGCTTAAAATGA
TATACACAATCATGTCATACTTGCACAGAACACTCATACACCATTTTCCATTAGATGAAA
TTTATGGTCTGCATTTAAAGGGAATATGCTTTGCTGCAAAAATATACACATATTTTTTAA
GCCTGAAATGTACATTTATTTTCAAAAGTGGTAAAGGTATGACTAGATGGGAGTATTGAG
AGAAGCATAATATTATCTTAATAAAGCATAATTTGATGTTTGGCAGTTAACAAGACAAAT
AATTTAATTTCTGAATGTCGTGATATTCCCACAGTCAGGGCCCCAACACCAGGCCACATT
TGAGTTCCGCTGTAAGGCTTTAGGTGAGTCTGTCTCTGCTTCTGCACGATCAAAGAGGGA
AGCAAAGCAGGAAGCAGCCCGTGCCATGCTGTTGTGTCTTTCTACAATAGGTCACCGTGT
ACCCCCACCATTTGCTACTGAATTTACACAACCCTCTCATAGTAACCAATCGGCTGGCGA
GTGCTCCGAGGGCAAAGCGCCCACAGTGGACAGTCGCAGCTATGTGGCGCTGCTGAAGGA
GCTGTGCGAGGAGTACAAGCTGCCGGGCGTGGAGTACGCGCTGGTGGCGGACACTGGGCC
CGCGCACATGCGCCTGTTCAGCGTGCGCGCCAGCATCGGCCTGCACTCGCGCGACGCCAG
CGGCACCACCAAGCGACAGGCGCGACAAAAAGCCGCAGCCGACCTCTACTTGTTCCTGCG
TGAAAACCTCTCGCGTCTCACTCATGATTTCGTTGAGGAACAAGCGCTGGTGCGAGCCCA
CGAGCGCGCCATGGAGCGGTTGGTGGAGACCACTCCCGCGCCCTGGAAGCCGGACCTCGG
CCAGCGCGTCTCCGAGTACCATTACGGCCTCATCTCGCACACGGATCCCGAAAAACGCAT
GGCGGCTCGAGCCGTGCTATCCGAGACGGACGACATAGAGGAGGCGGCTGAGCGCGCGGC
CGCGGCGCTGGAGCTGCAGACGTGCTGGGAGACCCTCGACCCGCTCCACGTGCTGAAGCT
AGATGCGGCCCCGGCTCTAGCCTTCAGCGGACACTCGCGCGCGGACGCGGCCCGGGCGGC
TCTGCGGTACCTGCGCCGAGCCCTGCGCGACGTCTCCCCTCCGCCGCCCGCCGCTCTGTG
ACCGCGCTGTGACCGCACTGTGACCGCGCTGTGACCGCACTGTGACCGCGCTGTGACCGC
ACTGTGACCGCGCTGTGACCGCACTGTGACCGCGCTGTGACCGCACTGTGACCGCGCTGT
GACCGCA
(2167 bp)

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