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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69872_c0_seq3
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		PREDICTED:_protocadherin-15_[Bombyx_mori]
Ontology
GO:0001750 C photoreceptor outer segment
GO:0001964 P startle response
GO:0002009 P morphogenesis of an epithelium
GO:0005509 F calcium ion binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0007628 P adult walking behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0035058 P non-motile cilium assembly
GO:0035264 P multicellular organism growth
GO:0042491 P inner ear auditory receptor cell differentiation
GO:0048839 P inner ear development
GO:0050910 P detection of mechanical stimulus involved in sensory perception of sound
GO:0050973 P detection of mechanical stimulus involved in equilibrioception
GO:0051017 P actin filament bundle assembly
GO:0060013 P righting reflex
GO:0060088 P auditory receptor cell stereocilium organization
GO:0060122 P inner ear receptor cell stereocilium organization
Transcript
Level		FPKM:1.52 TPM:2.65
ORF EntryO_BomoEE19757_complete:A_BomoEE_comp69872_c0_seq3
Sequence
(Nucleotide)
TATAAAAAAAAAAAAAAACATTACGCGCAATTTGTTCTCATTTAAAAGACTAGCCTTGGC
TAAGTAAGTACCGCTAAGAAATTCGTTATAAAAATTATTATAATAATATTAAGTTTGAAG
CATTTTTCAGTCGTATAATAATTATTATATTCGTTGAACACATCATCATCATCATTATAC
TAATTTTACGAGTTTTATTAAAAACGAAATCATAAAACAGAGTAAATAAATTTAAATACA
AACTTTTTTTACAAAAGTTTTGTTAAACATATACATTTTTTGAATACGTAAATTAATAAA
TTAAAAGAAGAAAATTATACGAAGAATCGCTCGAGCTAATTAAAAAGAGGTTGAATATAA
AAAAAAAAAATATTTTTATGGAAATGGGAGTTCATTTATGATAAAGTCGCTCAGTTCGCT
TATTACAAAACCTATGTACAATTTTTTTTATGTAAAATATTTTACGAAATTAATAACAAA
CAACCGGAAAGAAATTAACGTTACCCTACCACAAAAATGTTGTATTTTTGTACCCCTAAA
CTATAGTACAAATAGATAAATATAAATAAATCATATATAACTGAAAAGATTATACAATGT
ATATTTATTTTTAGAAGATAATTTAATTAGATTTATAAAATAAGAATAGTCATTTAAAAC
GATCACAAAATAGAAGGGATATAGTAGAGCAATACTTTAAGATTTCGCTTATATTAAAAC
AGCACTTCACCCACTGATTGGACGGATATTTCATCTTACAATGTTCGATATCATTATTTT
ATTGTTTCACAAATTTCTCACTATAACTCTGTCGTAGTTTCGACAGTCGATTGATCGTAT
GGGTACCCAGAGAAGTTTCTTTTGCCAAATGTCACGTTGTCGTTGTCAGAGGCTTTCTGC
ATTCCGGGTATATCGTCGTACGCCATTATGGGTTGAGTTTTCTTCTTGTGATTATTCCCG
TTGATCTTCCTACCTAATGTGGCGGCTAATAATCCACCACCGACATTGTTATTGTTGGCA
CGGGGCAATGTCCCGAGAGCGTTGTTCAACGCTTGCGAGTTCGGCATCCTTCGGTTCAAT
GTCTGTGTGTTGCGCGCTATGGACGCGTTGTTCGCGATAGGATCGTAGTGGCTGTTGTGG
AGTTTGTTCAGAGTACCCCCGTTTTCATTGACGCTCGAGGCTCGAGCTGTCGTCGCTGTT
TCCGATAACGTTGGACTTCTCTCACCATTATCTTTGGATAAATATTGAACGTTGTGTATA
TTGAACGCGTGATTGTTTGGACTGAAGTCTAATTGCAGATCCGCGTCATCGACCGCCATA
TTGAGTACCTGTGTTTCATATCTCGGTGCGGGGTCATCTTCACTGGACTCGTAGCCAGAC
GGAGGACGAGGAGGCGGCATGCTCATACTCAGAGTTCCGTACTGTTGAACCGCTTGCTCT
TTGTGTTTCTTATACCTGTTCCATGAGGCGCAGATGTAGATGGTGGCGACCAGTGCGGCG
ACCAGTACGACGGCGGCCAGGCCTATCAGGGCGGCGGGTAGGGCCGTGGCGAGCGGCGCG
GCTGCTATGTGAGGCTTCTTCGGCAATTCGGCCGCTAATAAAGGAGCTCGAACTTCACTG
ACTGGAGACTGAAGCCGAGCAGCCACCGCTTTGTGGACCCCAGTCTCTATGGCCTTCTGC
ACAGGCATAGATTCTCTAGTCAATATTTCGCCAGTACTAGGTTCGATTAGGTAGAGCCAA
ACGTCGGTCCCACGGCTGTCGCTCTCCAATGTACCATTCTCTCCTAGATAATGTCTCGAC
GTTAACTTTTCTAGGCCGGCGACCAAACCGCTCTTCTCTTCTATGACCGATAGAAGACTT
CTGGCTCTCCGGCGCATCGCATCCGGATTCAAATCCGCTATTTCCAATACCAGTTGATTC
TCTTTTTGTAATAAGTTTATCACAACCGACGCTCTGGCTATATTATAGTCCTGTGGCGAA
TCAGGGTTGTCTCTCGCGGTCACGCTGAACTTGAACGGCAGAATGTCCTTTGGAACGTTC
TCGAACGATTTTATATTGCTTATGATCCCCGTGTCCGCGTCCAGACCGAAGTACTCTTCG
GCCGCTTCGGTCCACGAGTTCTTGTGGTATTCTAACTTGCCGTAAGCGCCGCTGTCCCGA
TCTTTCGCCTTTACTTGAAGAACGTTGGTGCCCAGAAGCATCTCTTTATTGACAATAGCG
AAGTATTTCCCTTTCGCGGCGGCCACAGTGGACTGTTCGTTGAACACAAACACGGGGTGG
TTGTCATTGACGTCGGTCACATGAACTTTGACGAGCGCTCTACTACTGTCGGGGTTGATC
AGACCCTGTATGGACTCCAGTTGTACTTCCAGAGAATACTCCGATAGTGTCTCGTAGTCT
AGCGAACTCGTGTTAAGGTATATCGCGCAGTCGCGGTCTTCTGTCAGCTTCACGTAGAAT
ATCCCTTTTTGCGAAGATTCTGTGAGTAAGCATTTTAGAGGCGTGTCTGGGGAATGTTCC
CTTTTATTGAGTAATGGCAACACTCTAACTAGGGTACCGTTGGGCGAGTTCTCGGCAACG
TGTTCCGTATACACTGTATCAGCGAAACCTAAGCCGACGTCAGGTGGAACGGTTGCCGAA
TGGCTCACGTACACCGTTAGACTGGTCACCGATGACATGACCGGATCGCCTTGGTCGTAA
GCTTGTACGTCCACCGTATACTCGCTATCCGTTTCCTTCTTCAGATCATCGCGAACCCTC
AACGCACCGGTGTCGGGTTCGACGTGGAAGTACTTGGACGCTTTACCCCGACCCACTAGT
TTGTACCGGACTCTGTTGTTCGGTGACGTCGCGTCTGCGTCACTGGCGACGACCGTCTGC
ACGAGACTCCCTATAGACGATGAGTCCTCCACCGTGACCGGTCGGACCACTGACGTGAAT
ATGGGCGAGTTATCGTTCTTGTCATCAACGACAATCTCTATAGTTGTGGTCGCGCCCGGT
CCTTCTTCGCTGTTCTCTTCGGTGCCAACAATGAGTTCGTGTCGGGCCGATGTTTCTCTA
TCTAAGGCCTGCAGAGTCCTTACCAGACCCGACTTGCGGTCGATCGAAAACAGATCCATA
TCGCCTTTCATTATCGTGTACGTTATCTCCGGAGATGTATCGGGATCTTCTGCCTGAACT
TTAACGACTGGGTAATTGGGCACGTTTTCCGGTACATGAACCGAATACAGCGGCAAAGGA
AATATTGGCGCTTCATCGGGTATGTCTTGTACTTGTACAGCGACCGACGCTGTTCCCAGA
CGTTTGTCTATAGCGCCATCTGTCGCTGTTACCACGAAAGAATATTCCTTCGTCTTCTCA
TAGTCGAGTTTGGTCTTGGTGCTGATCATCCCGGTGTTGTTGTCGATGTTGAAAGGCAAA
TTGTTCGGGATGCTGTAGCTTATGATCGCGTTGACGCCTTCGTCCGCGTCCGTCGCGTGC
ACGTACCCAACGAATTCATCGGACATCCCTTCTTTAACATGAAACGTATAGAATTCCTCA
TCAAATTTCGGATTATTATCGTTTATGTCGGTAACTTTAATATTGACGGTCGCAGTGCTC
ACTAATTTCCCTGGATCTTCTGCTTTCACCTCCAATTGATATCTCGTCAAAACTTCTCGG
TCTAGACTCCTAATGACCGTTATGACGCCAGTATTAGAGCCGATTGCGAACTGTCTCAGA
TCGTTTCCAGATAATATGCTGTATGTCACAGGCTCGTTCTCGGGATCTTTTGCAGTGACC
GTGGTGACGGTCGAGTTAATGGCGGCGCCCTCCGAGACGGGCGCGTAGTAGTCTCTGGAC
GAGAACTGCGGCGGGCTCGTGTTAGGGCCGGGGGCCACGGATAACTCCACAATGCCCTGG
GAACTGAGGCCCTTAGCGTCGGTGGCTCGAACTGTAACGCTGTATTGTTCGCCGGCTTGG
AGACGCCCCGTGCTTGATATAACTCCCGTGTTAGGGTCTATAGTGAATTTGTTGCCACCA
TTATTAGACACGTGATATAAATTATAGGTCACACGTGCGTTCTCACCCTCGTCGATGTCA
ACAGCTTCGACCTTATGCACTGCGGTGGGTTCTAAAGTGGCCGGTACAACTATTGGTTGG
GTTTTAGGTATGGTTGGTGCGTTATCGTTCTGGTCTAGCAACTGTACGGTGATGGTATAT
GGAGCTGAGGCGGCTCCACCGTTCGCTTCGCGGGCTACGACCTGAATTCTATATTTCCCT
GGATTCGGTGGATCTCTGTCAAGTGTCTCGTCACCAACAACCAAATATCCGTCCTTGATG
TCGAAGAAATTAGTGGTTAGTTCAAACGTGTAGTTCGGAATTGGATCTCCTGGTCCCAGA
TCGGGATCAGAAACAGCTAGCTCAATCGGCTGACCGTTTAAGTCCAAGACTTTAGTTCCT
TTCGGTGAGTTTTCCTCGACTTCCCCTAAATCTGAAGAAGCTTTCACGACTGGTGGACTA
GCGTCTACCGGCCGCACTGTGATGGTCAACTTGGCTGTGGTATAACGTTTCGCTTCTGAT
ACTTCTTCGGCCTTAATGACCAATTGAAACTTTTTCGCAATACTTGTATCGACCGGCACC
AGTTGCCTTACAGCGCCGGTGTTCGTGTCGATAGTGAAATAATCCGGCCAAGACTCTGGT
TCTCCGCTCTCGATGCTGTAACGTATCCTCGCGTTCAATGTATCCATGTCGACGGCTTGA
ATCTTTTCCGGTTCTAATGAGAGGATTCCTGCTAGCATACCGCTGTTCACGTAACTGGCA
TATTCGGGGTTGAAACAAGCTCCTTCGTGTAGGGTGCAGCCTTTGTATATGAATGAAGGA
TCTTGATCATCATCATCTTGAACGTTCACTGTTAGCGTCGTTGTACTTGACAACCGTCTT
TTGTTATCACGGGCACGATCAGAAGCAACAATAGTGACTAGATACTTCTGTGTTCGTTCG
TAATCCAAACTCTTGTTAACTGTGACGTGTCCAACATGAGGTATCGGAATGGCGAAATGG
CTGTACCCGTCAGCGGCGTTCATTGAATCCAATGTCTGGTTATCTCCCTGTATTATGAAG
TATTCTGACAAGCCATTAACTCCAGCGTCGATGTCAACTGCTCGAATCCCTTCGAATATC
GTCGTGCCAATCGGAGCCAACTCAGAGACGCTAGTTTCATACGGAGTCCCCTGAAACACG
GGCGCATTATCATTGATATCCGACACTCTCACTATCACAGGTATGGTCCGACGCTTCTTC
GTAGCTTTCACTTGGCACACCAACTGAAAGACCATATGTGAGAGGTTGTCCGCGTCTCTA
TCGAGGGGCTGGAGTAGTTGTAAGCGTTTTCCATCGAGCTGAAACAGCGTTGGCCCCTTA
GGGAACACTGTCGATAATACTACATCCACATCTGGCTCCCCCACTACTGGCAAGATTGCT
GGCACCGTGCTTTGGTTAACTTGATCTCCTCTGCTTTCTTCGATATCGACTATAATACTC
GATTGACCCGTTTCCACTTCGCATGGACCGGGAGTGGCGATGACCAGATAAACCAGGCAT
AGGAAAAGCCATATCGATGTTTGTCCATGCCGGATCAGCGCACTCCACCGCGGCATCTCA
GCTAGATTTATAACGCTTATGAATTAGCATTCCTTAGATCGTCGGCTTTGCTTCATCTAA
ATGCCGTTTGTTAGCGGACCTCATAATCTAGCCGCCATCTCGATATCGAAAATAGGATGA
TAGTGACAAATTCACCTTTCTATTTGAAGCGGAGGCTGCGTCCTTAACGCCCCTGGAATG
CAACACCTGCTTCCACAACTACACTCACAGATCCTGGTTGTTAATCACTAAGTACGAGCC
TTAAAGTATTACAAAAATCACGTTCACCGCTATTAAAAGGTAAAGTCACAAGCACAATTA
TTTTTTTGTTGATGTTATTTAATAAATACGTAAACAAGTCCACGAACTTTATTTAAAATT
ATTATTATAATTCAATCGCCACGCTTAACAACGTACAAACGCGACAGCCAAACGCGACGC
TTTACTCTTTGTCCGAGTCCCCCGTGTCGCTTCGGTCGACGAACGAATACGAGTGAATAG
TTCGCCCGTCGCCGCGCCGTCCGCCGGCCGGTGAATCGCTTCGAGGCGAGGCATCGGGGC
TGTTTCGATCTGGAATCAAGCCTGGAGCTACTGAGCCGACGAGGTAACTTACTGGCAATA
TATTATGAGATACACTCTAGACGTCTGTTTAAATTAATATCACGTGGTGCCCGATTAAGA
AATCGCCTGTTGCCTTATAGCTTCGATTTTGAAGCATCATGGGCCCGCGCACGTACTCAC
TCACGAACAGATTGGCGGACTAACCTAAAACTTCCTGTGAAATACCGATGAGGTCTTACG
TACCCACATTAATACCTACTTATAAAAAAATGTACCCGCTCCACTACTATATATTGTCTG
CATTAATCAGTGTGCTTAGTGCGAGTT
(6507 bp)

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