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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69664_c0_seq4
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_protein_purity_of_essence_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.78 TPM:3.10
ORF EntryO_BomoEE19194_complete:A_BomoEE_comp69664_c0_seq4
Sequence
(Nucleotide)
CGCCGCGCTCGTCGCGCCCGCCGCGTCCGCACGCTGCGCCGCACCGGTCGACGTCGAAGT
CTTCCAACGTGCCATCAGTACACTGAGCAGTCTCATTATGACGAGTTGTAATTCTCTTCG
ATTGGTCCTCTCGTGGATCGGTGGCAAGGTTTCCTCTCCCTGATTGTCGAGCTCCGACAC
CAACAGTTCCAGGCGCATGATAGCTAGCTGTAGTTCACCGCGCTCAGTACGGTCTTCAGT
GGGGGCATTCTCTTCAGGTTTCATGTCCAATTCTGCTACTAGCAGCTCTAACAACCTGTC
TAGTACGGCTCGATCGCGTTCCAAACTTGAATCCAAGTCGCTGGCTAGCATTAGGACGAC
CTGGAAGAATGGTATCGCTCGTACTCCAGGCAAATTCCTAAGAGTGGGCAGAGCGTCTAG
AGCAGCCGAGAGCATGGACAGGCGCAGTGCGTGAAGCTTACGGCTTTCACTTTCGGCTTC
CACGGTCTTTGAGGTTGACGCAACCGGTTGGGAAGAAGACGTCGATGGCCCAGCTGTAAC
AGCGACAGGCGCAACGATGTTAGAAGCCGGCATTGTCCCAACCGTCGGAGCTGACATCGT
GTCTCCATACGCGCTACTGCGTCCAGAAACTCCGCCAATACTGTCCGCGCCAGAGCCGCC
GCTTTCGGAGCCACCGGAGCCCGGAACCTCGGCCGGTGACGTCCTCAGGGTGCTGCCGTC
TGTCGCTGCAGTGCTGCCTTCATCGTCAGACCCGGGCGGTGAGACAGTAGCGTCGCTGTA
GCCGGGCGCGGAGGGGGGCGGCGCGGAGGGCGGCGGGGGCGCGCGGCGCGGCTGTTCCTG
AAGCGAGAGCGCGATCGCGAGCTCCACCATCGTGTCGTCGTCTGCGTCCGGCGGGATGTC
CAATAGGGCTTCCAAGCCTCCATCAGGGGCGAGAAGAACCATAGGCTCGAGCGAATCATC
GACGTCCATGAATTGATTGTCTTGATGTTCGTCACGATTAGCACTGAGATCGGACTCGGA
GACCGCGGCCTCCGTTATGGAGCTCGTCGGCTGAGCTGTGGTCACCGAAGAAACAGCACC
GGGTGTATTCGGTGGTGACGGAATAAATACACGACGCCGTTTAACTCTCGGTCTAAGAAC
TCTCATCAGGGCAGCTTTAGTGCCGAAGCTGATACTTTGATCCTCGGCGAGTAACAACGA
CAGATAAATTTGATTTCCAAATTCGATACATTCATGATCTCCGTGCAGTTGGAATGCGTG
TATTGTATCAGCGAAGGCGTGCAATGTCAGCTCAGAGTGTCGAAGACCATACGAAAGAAT
CCCAGGAGGTCCCCCAGCTGTAGACTTGCAGGCGGCTAAGCGCCACAGCACGCTCGCAAG
TAACGCACACAAATGTGGCTCCTTATCTTTTTCGTCTTGACTCGTATTTTTCCATAGAGC
AGACCATTCACCAGTAGATGGTTTCTGCGGCGTAGGAGCGCTATATTTAACTAGATGAAC
TGGTCTCGCCACAGCGACACCTCGGGCTAGCAGGACAAGCCGGAAGTACGCCTCCGGGTC
AATGTTATGAGGGTCCGCCGTGTCACGGAGCTCGCGTAGTGATGTACATACGTATTTTAG
TATGGCTTGATCCTTGTACTGGTGATAGTTGGCATTGTGCACGGCGCGCAGCAGACACTG
CGCCCGCGCGTGCAGGTGCGCGCTGGCGGGCGCACACAGCAGCTTCCTGGCGGCCTCGGC
CCCGTCCTCCGCTCCGCCCGCCGCGCCCACCGACGCGGGCGTGCCGGCTCCCAGCTCCAG
CGTCTCCAGGGCCGCACAAGCGAGGCGCTCTAGAGGGCTCGGCTTCCACATTCCGCTACT
GCCTTCTGCCTCCTGTACGATTTTGCTAGATGACGGACAAGCAGAGGGATCTTCGCTTTC
ATCGGGCCAGCCAAATTGTTCCTTAGTCTTACCGTAAACCTTAACCGAATCGACCATTGT
AACAGCTTCAGCGTCCGACGAAGGTCCGAAGTTTATCACCAATTTTTTATCTGACTGAAG
TGATTCCTCACGAGTCAAAGGCATGTCGAACCAGCGGTTGCGAGTAACGTTCGTAGTTTG
TAAGGAACGACCCAGTATTTCTATATAAGCGGGAGTTTTCGTAACATCTTGACTGCCCAG
CAATACTCGGAAGCCACAAATCACCATATTCGGGTCTGAATTTATGACTTCCAAAGAAAA
TCCAGTCACTTTGGTAGACACTACATACAAACCAGTTGTATTGAGTCGGTGTTTGATTAA
CGCAGTATTGTATACTTGGAGAAGATCGTTTCCACCAAATTCGATGTCATTCATTACAAC
ACAATGCTCAAAGAAATCTATAGGGAACTGAGTTGTTCCGTTGGCACCCGACTTAGATAC
GGCTTGATGCGATTTCCGCGGCGCGTGGTGCGTGTTGGTGCGGGCGCGGCGGCGCGGCGC
GTGCGCGGGCTGCACGCTGGGGGCGAGCCAGTACCCAGTCTTGTCCGGGTTGGCCGCATA
CATGCGGAGGCTACCGTCTTCACACAACAGAATCAACGTGCTTTTCTGTTCGCCTCCGCC
GCCGCACCAGTGGCGCACCGCCACCATGTCCGTTATCTTGGCTTTGGCCGGGACGACCTT
TATTTCTTGCACGAAAATGTTAGTAGGTGTCAACATAAGCACGACCGGGTTGTTCGACGC
TTGCATGACAGCTGTGATCAGGCCGGGATGTCCGGGCACCTCCGCCCACTGACACAGCGA
CTGCACGCCCCCCTGCTTGCCGCCGCCGCGACCGCTCCCTTCCTTCTGCGTTGCGGCCGC
CGACAACGTGATCATCGCTGTTCCTTTTAAGCTCTCCTCAACAGTGTTCAACGGAGCAAG
GAAGCTTTTGCCTTGAGCGTACGAAAAGAATAACATTTTCAATGTATGCGAGTAGTATAT
GGAGACTCCACCACCGCCAACCAGTCCGGCCACGTCCTGTATTTCAGGATGGAGTACTTC
AAGAGTGTTGGTAACGTAGAAGGTTCCGAGGCTCGCCCTGGACTCTTCACTCATGGGCTG
CCAGTAGATGTGGCCGGCAGAGCTCATGCAAAGCATGTGCATAACACCGTCTTGGTTCAC
GAAAGTTACATCTCGTACGTTTCCACTAGGTACGAGGAAATGATGCATAGGGTTGTTCAA
ATCCTTGCTGAGGTCATAAATCTTGACAAAATCCGAAGTTATCAGCGCAAGTTGCGTCTG
TGATCCAGGCAGCCATATTGCTTTAATTACATAGTTGTTACCCTCTAGACCGGTGTTGAG
AACTAGGTGATCTGCTACTGCACCTGCACTGTTAAAGGTCAGGACATGACATTCCTTGAG
ACCGCAGACTGCGAGCAAATCTTCATTCCACGGGTTCCCGCCGAGACTTAGAACCGTGAA
CGGTATCGGCGCGGATGACAAGCGCGTTAGCGTAAGTTTATGTTTCGACGAATCAGCTTG
TTTCAGTAAAGTTGATAGCTGGAGAACTGTGATCTTGCCTTTCTCGTGAGATACAGCTAA
ATGTTGCCTGCGTCCTTGAGGCGACGCCAGGCAACACATGGCAACACGTCTTAGTTTATG
TGCAGTCATCAGTTGCCTGATTGTTTGTCCGTTTTCTCCAGTGTATGACATGCGCACGTT
CTCGAATGCGCCCTCTTGTGAACCTAACGTGGGCAGCATGAGGTTGTCTGTGTGCGTGAA
GCGTTTGTCGCCGAGATGCAGATGTGCGAGTGCCCGCATGGCGCGGCCGTGTGCGCCCGT
GGGAGCGTGTCGCTGGCACGCCGCACGCACGGCCCCGCCCAGCGCCTCCAGCAGGCGGCG
CACGCGCTCCATGCACGCGCCCCATCCGCCGTACGACGACAGAAACGCGCGACACCCTTG
TATGTTGTGTGCGTGCACGGGTCGTCTGGGCGGAGTCATGAGCGCGGGCGCCACCGGGCT
CGAGGGCCGGCGCCGGATAGACGGAGCCGGAGTGCTTTCCTCTGCACCTGTTCTGGTCCC
CGCGGCGCCGCTCACGGAACGCTTCACCAACGCTTGACAGCTGGAGTCGGGCTTGGCGCC
ACAGTCGCAGAAGAAGTTCCCGAACTTCGCATAGGATACATCGTGTCCTCTGTGACAGAC
TCTTGCGCACACAGTACACACGCCGACGCCATCGACCATCTTGCACGTGTGACAGTGATA
CCAGTGTTGGTTCATGAACTCGCGTTGAGTCACCGTGAACGTGCACAGCTTGTACTGGAG
CATAGCATCTTCATCCGAGTCGTCGGCGCTAGTGTCGTCTTCGTCTTGTTGCTCGTCAGT
ATAATCAAGATCAAAGCCAAGATCAGCAGGTGACTCCCATGTTGGACTGACTGAACGCCA
AGATTGCGGCGGTGAAATGTTGATAGAGTGCAAGGCGTCAGTTAAGTAAGACAACAGAAC
GCAAGCTGATTCGATCTGCGGTGCGAGAGTACCGTCCACTTGTCCTTCCTCTAACTTCTC
CAGTATTTCCGGACTGCTCAGGTTGTCGACGCAGGTGGCGAGCCAGCCCACGGCCGCCGG
GAAGAGCAGTCTGTGGTCGGAGCCGGCGTGCGCGTCCGCCAGCCGACACATCTCGCGCAG
CAGCAGCGGTGAGCACGCGCTGTCTCCGCACACGCTGATCAGCGCGGTCAGCATCCGCTC
ACTCACCTTCTCGTTGCAATGCAGTACGACATGTTTGCAGAGAGCAGAAAGTAGCGTGGC
ATTGTCATTGGCCACGTCGGTGAGAGGGGCGGGAGGCGTCTCCACGGAGGCGGTGGGCGC
GACGCTTGTGGCAGGAGGACCGTCTTTACCCTCCGACCAACTACTCGTTTCCGAATTACC
AGACTGTTGAGCAATTTCTGATTGTGGTCTCGGTGCTGGAGAAGGCGTGTCGAACACATC
GACGGGCACGTCCGCGTCGTGGCGCTGCGGCGGCGCGTCGCTGGCCGAGCGCAGCACGCG
GCTCAGCGCGTTGTGCAGCACCGTCGACACCGGGTTCAGTAGCGTGTCGGGGGCTGAGGA
CGTGGGCGTCGCCAGCTCTGTTTCGGTCGGAGTCCCATTCGCAGTGGCCGTATTGCCATT
TGTCGCCACTGGCGCTCCCACACAGATATGAGAGAGGAGAGTACCTAGCTCCTGCTGGTC
GGCGACTCCGATGAACTGGCACACAGACACGCACAAGCTGCTGCTCAGTTCGGAGCTTTC
ACATCCACTGAATATTTTGATGAACAGTTTAATTACTCTCTCGGAATATGTACTCCTTGC
ATTCGGCGATGATATTAATATTCTTCCTAGAGAATAACCGGAGTTTTCACAGAACACGTA
CTCGTACGCGAGTCGGCCGGCTTGTCGGTCTAGAATCTTCTCCCAGTACTTTACCATATG
TTTCAATATTTTTTCCGTCGAAGGCAAGAGATATTCGACAAGTACAGGATATGTTGTCTT
TAAAATGTGCTCATGGATTAGCTGTTCCGCTCTGACAACTTGTGGCACTAGTATGTTGAT
AGTGGCGCCTAGTGATTCCGCCATGAATTCCAAACGAGCGTCAGTCAAGGCCGGGACAAT
TAGCTCCAATGTCCTTCTAGTAAGTTCGAGGCTATCTGTCAGCTTATTCGCTCCCAGCTC
GAGTAGTTTAGCCGCGGAGTAGGACAGCATCATAAGGGACAGTCCAATAGAGTATTTCGT
GTTGGCACTTATCGACTCGCAGTGCTGCGACACTAGCTTCAGGACGGCGCTCTCAGATGG
TATAATGTGAGAAGCGTAAAATGCCAGGTTGACGAGCGGCGGCGGGTTGGCCATCTTGTC
GAGCGCGGCGGCGGCGGCGGGCGGCAGGTGCGCGCGCAGCACGGCCAGCGCGGCCAGGGA
GCGCGATACGTCGCCGCCCTCCGCCACGCCCTCCGACTCGGAGCCCGAGCTCACGGCCTC
GCTGCCAACCACCTCGATGTTCCAGGTCTCTCTCCTCTCCCTCGTCGGCTCCGCGGGGTG
GCTGTCTGCGGCGCGC
(6016 bp)

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