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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp69664_c0_seq3
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_protein_purity_of_essence_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.84 TPM:1.47
ORF EntryO_BomoEE19189_complete:A_BomoEE_comp69664_c0_seq3
Sequence
(Nucleotide)
CGCCGCGCTCGTCGCGCCCGCCGCGTCCGCACGCTGCGCCGCACCGGTCGACGTCGAAGT
CTTCCAACGTGCCATCAGTACACTGAGCAGTCTCATTATGACGAGTTGTAATTCTCTTCG
ATTGGTCCTCTCGTGGATCGGTGGCAAGGTTTCCTCTCCCTGATTGTCGAGCTCCGACAC
CAACAGTTCCAGGCGCATGATAGCTAGCTGTAGTTCACCGCGCTCAGTACGGTCTTCAGT
GGGGGCATTCTCTTCAGGTTTCATGTCCAATTCTGCTACTAGCAGCTCTAACAACCTGTC
TAGTACGGCTCGATCGCGTTCCAAACTTGAATCCAAGTCGCTGGCTAGCATTAGGACGAC
CTGGAAGAATGGTATCGCTCGTACTCCAGGCAAATTCCTAAGAGTGGGCAGAGCGTCTAG
AGCAGCCGAGAGCATGGACAGGCGCAGTGCGTGAAGCTTACGGCTTTCACTTTCGGCTTC
CACGGTCTTTGAGGTTGACGCAACCGGTTGGGAAGAAGACGTCGATGGCCCAGCATACGC
GCTACTGCGTCCAGAAACTCCGCCAATACTGTCCGCGCCAGAGCCGCCGCTTTCGGAGCC
ACCGGAGCCCGGAACCTCGGCCGGTGACGTCCTCAGGGTGCTGCCGTCTGTCGCTGCAGT
GCTGCCTTCATCGTCAGACCCGGGCGGTGAGACAGTAGCGTCGCTGTAGCCGGGCGCGGA
GGGGGGCGGCGCGGAGGGCGGCGGGGGCGCGCGGCGCGGCTGTTCCTGAAGCGAGAGCGC
GATCGCGAGCTCCACCATCGTGTCGTCGTCTGCGTCCGGCGGGATGTCCAATAGGGCTTC
CAAGCCTCCATCAGGGGCGAGAAGAACCATAGGCTCGAGCGAATCATCGACGTCCATGAA
TTGATTGTCTTGATGTTCGTCACGATTAGCACTGAGATCGGACTCGGAGACCGCGGCCTC
CGTTATGGAGCTCGTCGGCTGAGCTGTGGTCACCGAAGAAACAGCACCGGGTGTATTCGG
TGGTGACGGAATAAATACACGACGCCGTTTAACTCTCGGTCTAAGAACTCTCATCAGGGC
AGCTTTAGTGCCGAAGCTGATACTTTGATCCTCGGCGAGTAACAACGACAGATAAATTTG
ATTTCCAAATTCGATACATTCATGATCTCCGTGCAGTTGGAATGCGTGTATTGTATCAGC
GAAGGCGTGCAATGTCAGCTCAGAGTGTCGAAGACCATACGAAAGAATCCCAGGAGGTCC
CCCAGCTGTAGACTTGCAGGCGGCTAAGCGCCACAGCACGCTCGCAAGTAACGCACACAA
ATGTGGCTCCTTATCTTTTTCGTCTTGACTCGTATTTTTCCATAGAGCAGACCATTCACC
AGTAGATGGTTTCTGCGGCGTAGGAGCGCTATATTTAACTAGATGAACTGGTCTCGCCAC
AGCGACACCTCGGGCTAGCAGGACAAGCCGGAAGTACGCCTCCGGGTCAATGTTATGAGG
GTCCGCCGTGTCACGGAGCTCGCGTAGTGATGTACATACGTATTTTAGTATGGCTTGATC
CTTGTACTGGTGATAGTTGGCATTGTGCACGGCGCGCAGCAGACACTGCGCCCGCGCGTG
CAGGTGCGCGCTGGCGGGCGCACACAGCAGCTTCCTGGCGGCCTCGGCCCCGTCCTCCGC
TCCGCCCGCCGCGCCCACCGACGCGGGCGTGCCGGCTCCCAGCTCCAGCGTCTCCAGGGC
CGCACAAGCGAGGCGCTCTAGAGGGCTCGGCTTCCACATTCCGCTACTGCCTTCTGCCTC
CTGTACGATTTTGCTAGATGACGGACAAGCAGAGGGATCTTCGCTTTCATCGGGCCAGCC
AAATTGTTCCTTAGTCTTACCGTAAACCTTAACCGAATCGACCATTGTAACAGCTTCAGC
GTCCGACGAAGGTCCGAAGTTTATCACCAATTTTTTATCTGACTGAAGTGATTCCTCACG
AGTCAAAGGCATGTCGAACCAGCGGTTGCGAGTAACGTTCGTAGTTTGTAAGGAACGACC
CAGTATTTCTATATAAGCGGGAGTTTTCGTAACATCTTGACTGCCCAGCAATACTCGGAA
GCCACAAATCACCATATTCGGGTCTGAATTTATGACTTCCAAAGAAAATCCAGTCACTTT
GGTAGACACTACATACAAACCAGTTGTATTGAGTCGGTGTTTGATTAACGCAGTATTGTA
TACTTGGAGAAGATCGTTTCCACCAAATTCGATGTCATTCATTACAACACAATGCTCAAA
GAAATCTATAGGGAACTGAGTTGTTCCGTTGGCACCCGACTTAGATACGGCTTGATGCGA
TTTCCGCGGCGCGTGGTGCGTGTTGGTGCGGGCGCGGCGGCGCGGCGCGTGCGCGGGCTG
CACGCTGGGGGCGAGCCAGTACCCAGTCTTGTCCGGGTTGGCCGCATACATGCGGAGGCT
ACCGTCTTCACACAACAGAATCAACGTGCTTTTCTGTTCGCCTCCGCCGCCGCACCAGTG
GCGCACCGCCACCATGTCCGTTATCTTGGCTTTGGCCGGGACGACCTTTATTTCTTGCAC
GAAAATGTTAGTAGGTGTCAACATAAGCACGACCGGGTTGTTCGACGCTTGCATGACAGC
TGTGATCAGGCCGGGATGTCCGGGCACCTCCGCCCACTGACACAGCGACTGCACGCCCCC
CTGCTTGCCGCCGCCGCGACCGCTCCCTTCCTTCTGCGTTGCGGCCGCCGACAACGTGAT
CATCGCTGTTCCTTTTAAGCTCTCCTCAACAGTGTTCAACGGAGCAAGGAAGCTTTTGCC
TTGAGCGTACGAAAAGAATAACATTTTCAATGTATGCGAGTAGTATATGGAGACTCCACC
ACCGCCAACCAGTCCGGCCACGTCCTGTATTTCAGGATGGAGTACTTCAAGAGTGTTGGT
AACGTAGAAGGTTCCGAGGCTCGCCCTGGACTCTTCACTCATGGGCTGCCAGTAGATGTG
GCCGGCAGAGCTCATGCAAAGCATGTGCATAACACCGTCTTGGTTCACGAAAGTTACATC
TCGTACGTTTCCACTAGGTACGAGGAAATGATGCATAGGGTTGTTCAAATCCTTGCTGAG
GTCATAAATCTTGACAAAATCCGAAGTTATCAGCGCAAGTTGCGTCTGTGATCCAGGCAG
CCATATTGCTTTAATTACATAGTTGTTACCCTCTAGACCGGTGTTGAGAACTAGGTGATC
TGCTACTGCACCTGCACTGTTAAAGGTCAGGACATGACATTCCTTGAGACCGCAGACTGC
GAGCAAATCTTCATTCCACGGGTTCCCGCCGAGACTTAGAACCGTGAACGGTATCGGCGC
GGATGACAAGCGCGTTAGCGTAAGTTTATGTTTCGACGAATCAGCTTGTTTCAGTAAAGT
TGATAGCTGGAGAACTGTGATCTTGCCTTTCTCGTGAGATACAGCTAAATGTTGCCTGCG
TCCTTGAGGCGACGCCAGGCAACACATGGCAACACGTCTTAGTTTATGTGCAGTCATCAG
TTGCCTGATTGTTTGTCCGTTTTCTCCAGTGTATGACATGCGCACGTTCTCGAATGCGCC
CTCTTGTGAACCTAACGTGGGCAGCATGAGGTTGTCTGTGTGCGTGAAGCGTTTGTCGCC
GAGATGCAGATGTGCGAGTGCCCGCATGGCGCGGCCGTGTGCGCCCGTGGGAGCGTGTCG
CTGGCACGCCGCACGCACGGCCCCGCCCAGCGCCTCCAGCAGGCGGCGCACGCGCTCCAT
GCACGCGCCCCATCCGCCGTACGACGACAGAAACGCGCGACACCCTTGTATGTTGTGTGC
GTGCACGGGTCGTCTGGGCGGAGTCATGAGCGCGGGCGCCACCGGGCTCGAGGGCCGGCG
CCGGATAGACGGAGCCGGAGTGCTTTCCTCTGCACCTGTTCTGGTCCCCGCGGCGCCGCT
CACGGAACGCTTCACCAACGCTTGACAGCTGGAGTCGGGCTTGGCGCCACAGTCGCAGAA
GAAGTTCCCGAACTTCGCATAGGATACATCGTGTCCTCTGTGACAGACTCTTGCGCACAC
AGTACACACGCCGACGCCATCGACCATCTTGCACGTGTGACAGTGATACCAGTGTTGGTT
CATGAACTCGCGTTGAGTCACCGTGAACGTGCACAGCTTGTACTGGAGCATAGCATCTTC
ATCCGAGTCGTCGGCGCTAGTGTCGTCTTCGTCTTGTTGCTCGTCAGTATAATCAAGATC
AAAGCCAAGATCAGCAGGTGACTCCCATGTTGGACTGACTGAACGCCAAGATTGCGGCGG
TGAAATGTTGATAGAGTGCAAGGCGTCAGTTAAGTAAGACAACAGAACGCAAGCTGATTC
GATCTGCGGTGCGAGAGTACCGTCCACTTGTCCTTCCTCTAACTTCTCCAGTATTTCCGG
ACTGCTCAGGTTGTCGACGCAGGTGGCGAGCCAGCCCACGGCCGCCGGGAAGAGCAGTCT
GTGGTCGGAGCCGGCGTGCGCGTCCGCCAGCCGACACATCTCGCGCAGCAGCAGCGGTGA
GCACGCGCTGTCTCCGCACACGCTGATCAGCGCGGTCAGCATCCGCTCACTCACCTTCTC
GTTGCAATGCAGTACGACATGTTTGCAGAGAGCAGAAAGTAGCGTGGCATTGTCATTGGC
CACGTCGGTGAGAGGGGCGGGAGGCGTCTCCACGGAGGCGGTGGGCGCGACGCTTGTGGC
AGGAGGACCGTCTTTACCCTCCGACCAACTACTCGTTTCCGAATTACCAGACTGTTGAGC
AATTTCTGATTGTGGTCTCGGTGCTGGAGAAGGCGTGTCGAACACATCGACGGGCACGTC
CGCGTCGTGGCGCTGCGGCGGCGCGTCGCTGGCCGAGCGCAGCACGCGGCTCAGCGCGTT
GTGCAGCACCGTCGACACCGGGTTCAGTAGCGTGTCGGGGGCTGAGGACGTGGGCGTCGC
CAGCTCTGTTTCGGTCGGAGTCCCATTCGCAGTGGCCGTATTGCCATTTGTCGCCACTAG
CTCCTGCTGGTCGGCGACTCCGATGAACTGGCACACAGACACGCACAAGCTGCTGCTCAG
TTCGGAGCTTTCACATCCACTGAATATTTTGATGAACAGTTTAATTACTCTCTCGGAATA
TGTACTCCTTGCATTCGGCGATGATATTAATATTCTTCCTAGAGAATAACCGGAGTTTTC
ACAGAACACGTACTCGTACGCGAGTCGGCCGGCTTGTCGGTCTAGAATCTTCTCCCAGTA
CTTTACCATATGTTTCAATATTTTTTCCGTCGAAGGCAAGAGATATTCGACAAGTACAGG
ATATGTTGTCTTTAAAATGTGCTCATGGATTAGCTGTTCCGCTCTGACAACTTGTGGCAC
TAGTATGTTGATAGTGGCGCCTAGTGATTCCGCCATGAATTCCAAACGAGCGTCAGTCAA
GGCCGGGACAATTAGCTCCAATGTCCTTCTAGTAAGTTCGAGGCTATCTGTCAGCTTATT
CGCTCCCAGCTCGAGTAGTTTAGCCGCGGAGTAGGACAGCATCATAAGGGACAGTCCAAT
AGAGTATTTCGTGTTGGCACTTATCGACTCGCAGTGCTGCGACACTAGCTTCAGGACGGC
GCTCTCAGATGGTATAATGTGAGAAGCGTAAAATGCCAGGTTGACGAGCGGCGGCGGGTT
GGCCATCTTGTCGAGCGCGGCGGCGGCGGCGGGCGGCAGGTGCGCGCGCAGCACGGCCAG
CGCGGCCAGGGAGCGCGATACGTCGCCGCCCTCCGCCACGCCCTCCGACTCGGAGCCCGA
GCTCACGGCCTCGCTGCCAACCACCTCGATGTTCCAGGTCTCTCTCCTCTCCCTCGTCGG
CTCCGCGGGGTGGCTGTCTGCGGCGCGC
(5908 bp)

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